Construct: ORF ccsbBroad304_09991

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF017470.1_s304c1, BRDN0000461630
Derived from:
ccsbBroadEn_09991
DNA Barcode:
None
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
KRT6C (286887)

Vector Information:

Vector Backbone:
pLX_304
Pol II Cassette 1:
PGK-BlastR
Pol II Cassette 2:
CMV-ccsbBroad304_09991
Selection Marker:
BlastR
Visible Reporter:
n/a
Epitope Tag:
V5

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 286887 KRT6C keratin 6C NM_173086.5 99.9% 99.8% 545G>A
2 human 3854 KRT6B keratin 6B NM_005555.4 98.4% 98.5% (many diffs)
3 human 3853 KRT6A keratin 6A NM_005554.4 97.8% 98.2% (many diffs)
4 mouse 16687 Krt6a keratin 6A NM_008476.3 85.5% 85.6% (many diffs)
5 mouse 16688 Krt6b keratin 6B NM_010669.2 85% 84.2% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
69
ORF end:
1761
ORF length:
1692
Sequence:
1ggtctatata agcagagctc tctggctaac tgtcgggatc aacaagtttg tacaaaaaag
61ttggcaccat ggccagcaca tccaccacca tcaggagcca cagcagcagc cgccggggtt
121tcagtgccaa ctcagccagg ctccctgggg tcagccgctc tggcttcagc agcatctccg
181tgtcccgctc caggggcagt ggtggcctgg gtggtgcatg tggaggagct ggctttggca
241gccgcagtct gtatggcctg gggggctcca agaggatctc cattggaggg ggcagctgtg
301ccatcagtgg cggctatggc agcagagccg gaggcagcta tggctttggt ggcgccggga
361gtggatttgg tttcggtggt ggagccggca ttggctttgg tctgggtggt ggagccggcc
421ttgctggtgg ctttgggggc cctggcttcc ctgtgtgccc ccctggaggc atccaagagg
481tcaccgtcaa ccagagtctc ctgactcccc tcaacctgca aattgacccc gccatccagc
541gggtgcgggc cgaggagcgt gagcagatca agaccctcaa caacaagttt gcctccttca
601tcgacaaggt gcagttccta gagcagcaga acaaggttct ggacaccaag tggaccctgc
661tgcaggagca gggcaccaag actgtgaggc agaacctgga gccgttgttc gagcagtaca
721tcaacaacct caggaggcag ctggacagca tcgtcgggga acggggccgc ctggactcgg
781agctgagaaa catgcaggac ctggtggagg acctcaagaa caaatatgag gatgaaatca
841acaagcgcac agcagcagag aatgaatttg tgactctgaa gaaggatgtg gatgctgcct
901acatgaacaa ggttgaactg caagccaagg cagacactct cacagatgag atcaacttcc
961tgagagcctt gtatgatgca gagctgtccc agatgcagac ccacatctca gacacatccg
1021tggtgctatc catggacaac aaccgcaacc tggacctgga cagcatcatc gctgaggtca
1081aggcccaata cgaggagatt gctcagagga gccgggctga ggctgagtcc tggtaccaga
1141ccaagtacga ggagctgcag gtcacagcag gcagacatgg ggacgacctg cgcaacacca
1201agcaggagat tgctgagatc aaccgcatga tccagaggct gagatctgag atcgaccatg
1261tcaagaagca gtgtgccagc ctgcaggctg ccattgctga tgctgagcag cgtggggaga
1321tggcactcaa ggatgctaag aacaagctgg aagggctgga ggatgccctg cagaaggcca
1381agcaggacct ggcccggctg ctgaaggagt accaggagct gatgaatgtc aagctggccc
1441tggatgtgga gatcgccacc taccgcaagc tgctggaggg cgaggagtgc aggctgaatg
1501gcgaaggcgt tggacaagtc aacgtctctg tagtacagtc caccatctcc agtggctatg
1561gcggtgccag cggtgtcggc agtggcttag gcctgggtgg aggaagcagc tactcctatg
1621gcagtggtct tggcattgga ggtggcttca gttccagcag tggcagagcc attgggggtg
1681gcctcagctc tgttggaggc ggcagttcca ccatcaagta caccaccacc tcctcctcca
1741gcaggaagag ctacaagcac ttgccaactt tcttgtacaa agtggttggt aagcctatcc
1801ctaaccctct cctcggtctc gattctacgt agtaatgagc tagcgctaac cggtggcgcg
1861ttaagtcgac aatcaacctc tggatta

Download FASTA (ORF) (Full)