Construct: ORF ccsbBroad304_10557

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF015456.1_s304c1, BRDN0000401297
Derived from:
ccsbBroadEn_10557
DNA Barcode:
None
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
LINC00654 (149837)

Vector Information:

Vector Backbone:
pLX_304
Pol II Cassette 1:
PGK-BlastR
Pol II Cassette 2:
CMV-ccsbBroad304_10557
Selection Marker:
BlastR
Visible Reporter:
n/a
Epitope Tag:
V5

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 643406 LOC643406 uncharacterized LOC643406 NR_029405.1 7.6% (many diffs)
2 human 149837 LINC00654 long intergenic non-protein... NR_015406.2 4.7% 1_308del;403A>C;603_6127del
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Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
69
ORF end:
363
ORF length:
294
Sequence:
1ggtctatata agcagagctc tctggctaac tgtcgggatc aacaagtttg tacaaaaaag
61ttggcaccat gactgccttt gcactgtcca tgctctcagc ccaccacctc ctccccctgc
121cattgcagtg gctaacactg gagacgaaga ccaagacacc accgcctttc tccagtacct
181ctcaaatcag cacagacaag gacaaaggcc tcaatccaca actgctgaag atggaccctg
241gccacatggg atggtcagac acgcctgccc agctatctgc aggcgaagag gctcagaaga
301ggtttagggg cctgaaggac atcttgcttc catgtccata tgagcaggct atttctgctc
361cattgccaac tttcttgtac aaagtggttg gtaagcctat ccctaaccct ctcctcggtc
421tcgattctac gtagtaatga gctagcgcta accggtggcg cgttaagtcg acaatcaacc
481tctggatta

Download FASTA (ORF) (Full)