Construct: ORF ccsbBroad304_14214

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF018536.1_s304c1, BRDN0000406093
Derived from:
ccsbBroadEn_14214
DNA Barcode:
None
Epitope Tag:
V5 (not translated due to prior stop codon)
Notes:
Early stop codon detected

Originally Annotated References:

Gene:
CMAS (55907)

Vector Information:

Vector Backbone:
pLX_304
Pol II Cassette 1:
PGK-BlastR
Pol II Cassette 2:
CMV-ccsbBroad304_14214
Selection Marker:
BlastR
Visible Reporter:
n/a
Epitope Tag:
V5

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 55907 CMAS cytidine monophosphate N-ac... NM_018686.6 60.4% 59.6% 779delG;789_1302delinsG
2 human 55907 CMAS cytidine monophosphate N-ac... NR_135117.1 47.9% 1_130del;909delG;920_1642del
3 mouse 12764 Cmas cytidine monophospho-N-acet... NM_009908.2 53.2% 56.2% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
849
ORF length:
783
Sequence:
1ggtctatata agcagagctc tctggctaac tgtcgggatc aacaagtttg tacaaaaaag
61ttggcatgga ctcggtggag aagggggccg ccacctccgt ctccaacccg cgggggcgac
121cgtcccgggg ccggccgccg aagctgcagc gcaactctcg cggcggccag ggccgaggtg
181tggagaagcc cccgcacctg gcagccctaa ttctggcccg gggaggcagc aaaggcatcc
241ccctgaagaa cattaagcac ctggcggggg tcccgctcat tggctgggtc ctgcgtgcgg
301ccctggattc aggggccttc cagagtgtat gggtttcgac agaccatgat gaaattgaga
361atgtggccaa acaatttggt gcacaagttc atcgaagaag ttctgaagtt tcaaaagaca
421gctctacctc actagatgcc atcatagaat ttcttaatta tcataatgag gttgacattg
481taggaaatat tcaagctact tctccatgtt tacatcctac tgatcttcaa aaagttgcag
541aaatgattcg agaagaagga tatgattctg ttttctctgt tgtgagacgc catcagtttc
601gatggagtga aattcagaaa ggagttcgtg aagtgaccga acctctgaat ttaaatccag
661ctaaacggcc tcgtcgacaa gactgggatg gagaattata tgaaaatggc tcattttatt
721ttgctaaaag acatttgata gagatgggtt acttgcaggg tggaaaaatg gcatactacg
781aaatgcgagc tgaacatagt gtggatatag atgtggatat tgattggcct attgcagagc
841aaaagtatta aggtgcccaa ctttcttgta caaagtggtt ggtaagccta tccctaaccc
901tctcctcggt ctcgattcta cgtagtaatg agctagcgct aaccggtggc gcgttaagtc
961gacaatcaac ctctggatta

Download FASTA (ORF) (Full)