Construct: ORF ccsbBroad304_15866

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF012607.1_s304c1, BRDN0000404886
Derived from:
ccsbBroadEn_15866
DNA Barcode:
None
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
ING3 (54556)

Vector Information:

Vector Backbone:
pLX_304
Pol II Cassette 1:
PGK-BlastR
Pol II Cassette 2:
CMV-ccsbBroad304_15866
Selection Marker:
BlastR
Visible Reporter:
n/a
Epitope Tag:
V5

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 54556 ING3 inhibitor of growth family ... XM_017012369.2 97.1% 95.6% 268C>G;269_270insT;273_273delCinsTGGAAT
2 human 54556 ING3 inhibitor of growth family ... NM_198267.2 95% 95.6% 268C>G;270_274delGCACT;276_277insTTTGGAAT
3 human 54556 ING3 inhibitor of growth family ... NM_019071.3 22% 21.2% (many diffs)
4 human 54556 ING3 inhibitor of growth family ... XR_001744819.1 13.3% 1_112del;392_2085del
5 mouse 71777 Ing3 inhibitor of growth family,... NM_001311061.1 20.9% 21.7% (many diffs)
6 mouse 71777 Ing3 inhibitor of growth family,... NM_023626.4 20.4% 21.1% (many diffs)
7 mouse 71777 Ing3 inhibitor of growth family,... XM_006505166.3 15.1% 15.4% (many diffs)
8 mouse 71777 Ing3 inhibitor of growth family,... XM_017321747.1 12.6% 12.8% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
345
ORF length:
279
Sequence:
1ggtctatata agcagagctc tctggctaac tgtcgggatc aacaagtttg tacaaaaaag
61ttggcatgtt gtacctagaa gactatctgg aaatgattga gcagcttcct atggatctgc
121gggaccgctt cacggaaatg cgcgagatgg acctgcaggt gcagaatgca atggatcaac
181tagaacaaag agtcagtgaa ttctttatga atgcaaagaa aaataaacct gagtggaggg
241aagagcaaat ggcatccatc aaaaaagact actataaagc tttggaagat gcagatgaga
301aggttcagtt ggcaaaccag atatatgact tggatctttg gaattnncca actttcttgt
361acaaagtggt tggtaagcct atccctaacc ctctcctcgg tctcgattct acgtagtaat
421gagctagcgc taaccggtgg cgcgttaagt cgacaatcaa cctctggatt a

Download FASTA (ORF) (Full)