Construct: ORF ccsbBroad304_15924

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF018432.1_s304c1, BRDN0000410652
Derived from:
ccsbBroadEn_15924
DNA Barcode:
None
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
TMEM9B (56674)

Vector Information:

Vector Backbone:
pLX_304
Pol II Cassette 1:
PGK-BlastR
Pol II Cassette 2:
CMV-ccsbBroad304_15924
Selection Marker:
BlastR
Visible Reporter:
n/a
Epitope Tag:
V5

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 56674 TMEM9B TMEM9 domain family member B NM_001286094.1 100% 100%
2 human 56674 TMEM9B TMEM9 domain family member B NM_001286095.1 100% 100%
3 human 56674 TMEM9B TMEM9 domain family member B NM_020644.3 62.6% 62.6% 1_222del
4 mouse 56786 Tmem9b TMEM9 domain family, member B NM_020050.1 56.1% 60.8% (many diffs)
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Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
438
ORF length:
372
Sequence:
1ggtctatata agcagagctc tctggctaac tgtcgggatc aacaagtttg tacaaaaaag
61ttggcatgcc tgtgcggggg cctgatgtag aagcatactg tctacgctgt gaatgcaaat
121atgaagaaag aagctctgtc acaatcaagg ttaccattat aatttatctc tccattttgg
181gccttctact tctgtacatg gtatatctta ctctggttga gcccatactg aagaggcgcc
241tctttggaca tgcacagttg atacagagtg atgatgatat tggggatcac cagccttttg
301caaatgcaca cgatgtgcta gcccgctccc gcagtcgagc caacgtgctg aacaaggtag
361aatatgcaca gcagcgctgg aagcttcaag tccaagagca gcgaaagtct gtctttgacc
421ggcatgttgt cctcagctnn ccaactttct tgtacaaagt ggttggtaag cctatcccta
481accctctcct cggtctcgat tctacgtagt aatgagctag cgctaaccgg tggcgcgtta
541agtcgacaat caacctctgg atta

Download FASTA (ORF) (Full)