Construct: ORF ccsbBroadEn_00292

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF015820.1_s300c1, BRDN0000396135
DNA Barcode:
None
Epitope Tag:
None
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
CENPA (1058)

Vector Information:

Vector Backbone:
pDONR223
Pol II Cassette 1:
n/a
Pol II Cassette 2:
n/a
Selection Marker:
n/a
Visible Reporter:
n/a
Epitope Tag:
n/a

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 1058 CENPA centromere protein A NM_001809.4 100% 100%
2 human 1058 CENPA centromere protein A NM_001042426.1 81.4% 81.4% 209_210ins78
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
486
ORF length:
420
Sequence:
1gttcgttgca acaaattgat gagcaatgct tttttataat gccaaCTTTG TACAAAAAAG
61TTGGCATGGG CCCGCGCCGC CGGAGCCGAA AGCCCGAGGC CCCGAGGAGG CGCAGCCCGA
121GCCCGACCCC GACCCCCGGC CCCTCCCGGC GGGGCCCCTC CTTAGGCGCT TCCTCCCATC
181AACACAGTCG GCGGAGACAA GGTTGGCTAA AGGAGATCCG AAAGCTTCAG AAGAGCACAC
241ACCTCTTGAT AAGGAAGCTG CCCTTCAGCC GCCTGGCAAG AGAAATATGT GTTAAATTCA
301CTCGTGGTGT GGACTTCAAT TGGCAAGCCC AGGCCCTATT GGCCCTACAA GAGGCAGCAG
361AAGCATTTCT AGTTCATCTC TTTGAGGACG CCTATCTCCT CACCTTACAT GCAGGCCGAG
421TTACTCTCTT CCCAAAGGAT GTGCAACTGG CCCGGAGGAT CCGGGGCCTT GAGGAGGGAC
481TCGGCTGCCC AACTTTCTTG TACAAAGTtg gcattataag aaagcattgc ttatcaattt
541gttgcaacga ac

Download FASTA (ORF) (Full)

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