Construct: ORF ccsbBroadEn_01022

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF004499.1_s300c1, BRDN0000387875
DNA Barcode:
None
Epitope Tag:
None
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
MMP12 (4321)

Vector Information:

Vector Backbone:
pDONR223
Pol II Cassette 1:
n/a
Pol II Cassette 2:
n/a
Selection Marker:
n/a
Visible Reporter:
n/a
Epitope Tag:
n/a

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 4321 MMP12 matrix metallopeptidase 12 NM_002426.6 100% 100%
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
69
ORF end:
1479
ORF length:
1410
Sequence:
1gttcgttgca acaaattgat gagcaatgct tttttataat gccaacttTG TACAAAAAAG
61TTGGCACCAT GAAGTTTCTT CTAATACTGC TCCTGCAGGC CACTGCTTCT GGAGCTCTTC
121CCCTGAACAG CTCTACAAGC CTGGAAAAAA ATAATGTGCT ATTTGGTGAA AGATACTTAG
181AAAAATTTTA TGGCCTTGAG ATAAACAAAC TTCCAGTGAC AAAAATGAAA TATAGTGGAA
241ACTTAATGAA GGAAAAAATC CAAGAAATGC AGCACTTCTT GGGTCTGAAA GTGACCGGGC
301AACTGGACAC ATCTACCCTG GAGATGATGC ACGCACCTCG ATGTGGAGTC CCCGATGTCC
361ATCATTTCAG GGAAATGCCA GGGGGGCCCG TATGGAGGAA ACATTATATC ACCTACAGAA
421TCAATAATTA CACACCTGAC ATGAACCGTG AGGATGTTGA CTACGCAATC CGGAAAGCTT
481TCCAAGTATG GAGTAATGTT ACCCCCTTGA AATTCAGCAA GATTAACACA GGCATGGCTG
541ACATTTTGGT GGTTTTTGCC CGTGGAGCTC ATGGAGACTT CCATGCTTTT GATGGCAAAG
601GTGGAATCCT AGCCCATGCT TTTGGACCTG GATCTGGCAT TGGAGGGGAT GCACATTTCG
661ATGAGGACGA ATTCTGGACT ACACATTCAG GAGGCACAAA CTTGTTCCTC ACTGCTGTTC
721ACGAGATTGG CCATTCCTTA GGTCTTGGCC ATTCTAGTGA TCCAAAGGCC GTAATGTTCC
781CCACCTACAA ATATGTTGAC ATCAACACAT TTCGCCTCTC TGCTGATGAC ATACGTGGCA
841TTCAGTCCCT GTATGGAGAC CCAAAAGAGA ACCAACGCTT GCCAAATCCT GACAATTCAG
901AACCAGCTCT CTGTGACCCC AATTTGAGTT TTGATGCTGT CACTACCGTG GGAAATAAGA
961TCTTTTTCTT CAAAGACAGG TTCTTCTGGC TGAAGGTTTC TGAGAGACCA AAGACCAGTG
1021TTAATTTAAT TTCTTCCTTA TGGCCAACCT TGCCATCTGG CATTGAAGCT GCTTATGAAA
1081TTGAAGCCAG AAATCAAGTT TTTCTTTTTA AAGATGACAA ATACTGGTTA ATTAGCAATT
1141TAAGACCAGA GCCAAATTAT CCCAAGAGCA TACATTCTTT TGGTTTTCCT AACTTTGTGA
1201AAAAAATTGA TGCAGCTGTT TTTAACCCAC GTTTTTATAG GACCTACTTC TTTGTAGATA
1261ACCAGTATTG GAGGTATGAT GAAAGGAGAC AGATGATGGA CCCTGGTTAT CCCAAACTGA
1321TTACCAAGAA CTTCCAAGGA ATCGGGCCTA AAATTGATGC AGTCTTCTAC TCTAAAAACA
1381AATACTACTA TTTCTTCCAA GGATCTAACC AATTTGAATA TGACTTCCTA CTCCAACGTA
1441TCACCAAAAC ACTGAAAAGC AATAGCTGGT TTGGTTGTTT GCCAACTTTC TTGTACAAAG
1501Ttggcattat aagaaagcat tgcttatcaa tttgttgcaa cgaac

Download FASTA (ORF) (Full)