Construct: ORF ccsbBroadEn_01614

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF012036.1_s300c1, BRDN0000455717
DNA Barcode:
None
Epitope Tag:
None
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
AURKC (6795)

Vector Information:

Vector Backbone:
pDONR223
Pol II Cassette 1:
n/a
Pol II Cassette 2:
n/a
Selection Marker:
n/a
Visible Reporter:
n/a
Epitope Tag:
n/a

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 6795 AURKC aurora kinase C NM_003160.3 100% 100%
2 human 6795 AURKC aurora kinase C NM_001015879.2 94.8% 94.8% 1_45del
3 human 6795 AURKC aurora kinase C NM_001015878.2 88.9% 88.9% 1_102del
4 human 6795 AURKC aurora kinase C XR_430209.3 41.2% 1_1034del;1367_1371delGGTGA;1865_2000del
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
69
ORF end:
894
ORF length:
825
Sequence:
1gttcgttgca acaaattgat gagcaatgct tttttataat gccaacttTG TACAAAAAAG
61TTGGCACCAT GCGGCGCCTC ACAGTCGATG ACTTTGAAAT CGGGCGTCCC CTGGGCAAGG
121GGAAATTTGG GAATGTGTAC CTGGCTCGGC TCAAGGAAAG CCATTTCATT GTGGCCCTGA
181AGGTTCTCTT CAAGTCGCAG ATAGAGAAGG AAGGACTGGA GCACCAGCTG CGCCGGGAAA
241TTGAGATCCA GGCTCATCTA CAACACCCCA ATATCCTGCG CCTGTATAAC TATTTCCATG
301ATGCACGCCG GGTGTACCTG ATTCTGGAAT ATGCTCCAAG GGGTGAGCTC TACAAGGAGC
361TGCAGAAAAG CGAGAAATTA GATGAACAGC GCACAGCCAC GATAATAGAG GAGTTGGCAG
421ATGCCCTGAC CTACTGCCAT GACAAGAAAG TGATTCACAG AGATATTAAG CCAGAGAACC
481TGCTGCTGGG GTTCAGGGGT GAGGTGAAGA TTGCAGATTT TGGCTGGTCT GTGCACACCC
541CCTCCCTGAG GAGGAAGACA ATGTGTGGGA CACTGGACTA CTTGCCGCCA GAAATGATTG
601AGGGGAGAAC ATATGATGAA AAGGTGGATT TGTGGTGCAT TGGAGTGCTC TGCTATGAGC
661TGCTGGTGGG ATATCCACCC TTTGAGAGCG CCTCCCACAG TGAGACTTAC AGACGCATCC
721TCAAGGTAGA TGTGAGGTTT CCACTATCAA TGCCTCTGGG GGCCCGGGAC TTGATTTCCA
781GGCTTCTCAG ATACCAGCCC TTGGAGAGAC TGCCCCTGGC CCAGATCCTG AAGCACCCCT
841GGGTTCAGGC CCACTCCCGA AGGGTGCTGC CTCCCTGTGC TCAGATGGCT TCCTTGCCAA
901CTTTCTTGTA CAAAGTTGGc attataagaa agcattgctt atcaatttgt tgcaacgaac

Download FASTA (ORF) (Full)

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