Construct: ORF ccsbBroadEn_03376

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF006108.1_s300c1, BRDN0000388691
DNA Barcode:
None
Epitope Tag:
None
Notes:
Early stop codon detected

Originally Annotated References:

Gene:
MSRB1 (51734)

Vector Information:

Vector Backbone:
pDONR223
Pol II Cassette 1:
n/a
Pol II Cassette 2:
n/a
Selection Marker:
n/a
Visible Reporter:
n/a
Epitope Tag:
n/a

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 51734 MSRB1 methionine sulfoxide reduct... NM_016332.3 100% 100%
2 mouse 27361 Msrb1 methionine sulfoxide reduct... NM_001346668.1 86.7% 91.4% (many diffs)
3 mouse 27361 Msrb1 methionine sulfoxide reduct... NM_013759.3 86.7% 91.4% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
348
ORF length:
282
Sequence:
1gttcgttgca acaaattgat gagcaatgct tttttataat gccaaCTTTG TACAAAAAAG
61TTGGCATGTC GTTCTGCAGC TTCTTCGGGG GCGAGGTTTT CCAGAATCAC TTTGAACCTG
121GCGTTTACGT GTGTGCCAAG TGTGGCTATG AGCTGTTCTC CAGCCGCTCG AAGTATGCAC
181ACTCGTCTCC ATGGCCGGCG TTCACCGAGA CCATTCACGC CGACAGCGTG GCCAAGCGTC
241CGGAGCACAA TAGATCTGAA GCCTTGAAGG TGTCCTGTGG CAAGTGTGGC AATGGGTTGG
301GCCACGAGTT CCTGAACGAC GGCCCCAAGC CGGGGCAGTC CCGATTCTGA ATATTCAGCA
361GCTCGCTGAA GTTTGTCCCT AAAGGCAAAG AAACTTCTGC CTCCCAGGGT CACTACCCAA
421CTTTCTTGTA CAAAGTtggc attataagaa agcattgctt atcaatttgt tgcaacgaac

Download FASTA (ORF) (Full)

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