Construct: ORF ccsbBroadEn_03702

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF014067.1_s300c1, BRDN0000457181
DNA Barcode:
None
Epitope Tag:
None
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
PCDHGA7 (56108)

Vector Information:

Vector Backbone:
pDONR223
Pol II Cassette 1:
n/a
Pol II Cassette 2:
n/a
Selection Marker:
n/a
Visible Reporter:
n/a
Epitope Tag:
n/a

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 56108 PCDHGA7 protocadherin gamma subfami... NM_032087.3 100% 100%
2 human 56108 PCDHGA7 protocadherin gamma subfami... NM_018920.4 87.2% 86.4% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
69
ORF end:
2520
ORF length:
2451
Sequence:
1gttcgttgca acaaattgat gagcaatgct tttttataat gccaacttTG TACAAAAAAG
61TGGGCACCAT GGCGGCTCAG CCGAGGGGCG GGGACTACAG AGGATTCTTC CTGCTCTCCA
121TCCTCCTGGG GACCCCCTGG GAAGCCTGGG CAGGACGTAT TCTCTACTCC GTGTCGGAGG
181AGACGGACAA AGGGTCCTTT GTGGGAGACA TCGCCAAGGA CCTGGGGCTG GAGCCCCGGG
241AGCTGGCGGA GCGCGGAGTC CGCATCATCT CCAGAGGTAG GACGCAGCTT TTCGCCCTGA
301ACCAGCGCAG CGGCAGCTTG GTCACTGCGG GCAGGATAGA CCGGGAAGAG ATCTGCGCTC
361AGAGTGCGCG GTGTCTGGTA AACTTTAACA TCCTGATGGA AGATAAAATG AATCTTTACC
421CTATAGACGT GGAAATAATA GATATTAATG ACAACGTTCC AAGATTCTTG ACGGAAGAAA
481TAAATGTAAA AATAATGGAG AATACAGCTC CTGGGGTTCG GTTTCCGTTA AGCGAGGCTG
541GGGATCCAGA TGTGGGCACG AACTCCCTCC AGAGTTACCA GCTCAGCCCC AATCGCCACT
601TCTCCCTGGC TGTGCAAAGT GGAGACGATG AAACTAAGTA CCCGGAACTG GTGCTGGAGC
661GGGTGCTGGA CCGGGAGGAA GAGCGGGTTC ACCACCTGGT CCTCACAGCC TCTGATGGCG
721GCGACCCGCC CCGATCCAGC ACCGCCCACA TCCAGGTGAC AGTGGTGGAT GTGAATGACC
781ACACGCCTGT CTTCTCTCTG CCTCAGTACC AAGTAACTGT CCCCGAGAAT GTGCCAGTGG
841GTACAAGACT GCTCACGGTA CATGCTATCG ACCTGGACGA GGGAGTCAAT GGGGAAGTGA
901CATATTCTTT TCGGAAAATA ACTCCTAAAC TTCCAAAGAT GTTTCATCTG AACTCGCTTA
961CAGGAGAAAT ATCAACTTTA GAAGGATTAG ATTATGAAGA AACTGCCTTC TATGAAATGG
1021AGGTTCAGGC TCAAGATGGT CCTGGTAGTC TGACAAAGGC AAAAGTACTG ATCACAGTTT
1081TAGATGTAAA TGATAATGCT CCAGAAGTGA CTATGACGTC TTTAAGTAGC TCAATCCCTG
1141AAGACACACC TCTTGGGACA GTCATTGCTC TTTTCTACCT ACAAGACAGA GATTCTGGAA
1201AGAATGGTGA GGTGACCTGC ACCATTCCAG AAAACCTACC TTTTAAATTA GAAAAATCAA
1261TAGATAATTA TTATAGATTG GTCACAACCA AAAACTTGGA CCGGGAAACA CTCTCTTTGT
1321ATAACATCAC ACTGAAAGCC ACAGATGGTG GAACTCCTCC CTTGTCCAGG GAAACTCACA
1381TATTCATGCA GGTGGCAGAC ACCAACGATA ACCCACCCAC CTTCCCCCAC TCATCCTACT
1441CAGTCTACAT CGCTGAGAAC AACCCCAGAG GGGCCTCCAT TTTCTTAGTG ACTGCACAGG
1501ACCACGACAG TGAGGATAAT GCCCAGATCA CTTATTCCTT GGCCGAAGAC ACCATCCAGG
1561GGGCTCCAGT GTCCTCCTAT GTCTCCATAA ACTCTGACAC TGGAGTCCTG TACGCGCTGC
1621AATCCTTTGA TTATGAGCAG TTGAGAGAAC TACAACTAAG AGTGACTGCA CATGACAGCG
1681GGGACCCGCC TCTCAGCAGC AACATGTCAC TGAGCCTGTT CGTGCTGGAC CAGAATGACA
1741ACCCGCCCGA GATCCTGTAC CCGGCCCTCC CCACAGATGG TTCTACTGGC ATGGAGCTGG
1801CACCCCGCTC CGCAGAGCCC GGCTACCTGG TGACCAAGGT GGTGGCGGTG GACAAAGATT
1861CAGGCCAGAA CGCCTGGCTG TCATACCTCC TGCTTAAGGC CAGCGAGCCA GGACTCTTTG
1921CGGTTGGGCT GTACACGGGC GAGGTGCGCA CGGCTCGGGC CCTGCTGGAC AGAGATGCCC
1981TCAAGCAGAG CCTCGTGGTG GCCGTCCAGG ACCACGGTCA GCCTCCTCTG TCAGCCACCG
2041TCACACTCAC CGTGGCTGTG GCTGACAGCA TCCCCGAAGT CTTGGCCGAC CTGGGCAGCC
2101TTGAGCCCTC CGACGGTCCT TACAACTATG ACCTCACGTT GTACCTGGTG GTGGCGGTGG
2161CCACAGTCTC CTGCGTCTTC CTAGCCTTCG TCCTCGTACT GCTGGCGCTC AGGCTGCGGC
2221GCTGGCACAA GTCACGCCTG CTGCAGGCTT CAGAAGGTGG CTTGGCGAAC GTGCCCACCT
2281CGCACTTTGT GGGCATGGAC GGGGTGCAGG CTTTCCTGCA GACCTATTCC CATGAGGTCT
2341CCCTCACCGC GGACTCTCGG AAGAGTCACC TGATCTTCCC CCAGCCCAAC TATGTAGACA
2401TGCTCATCAG CCAGGAGAGC TGTGAGAAAA ATGATTCTTT GCTAACATCC GTAGATTTTC
2461AGGAATGTAA AGAAAACCTG CCAAGTATTC AGGTGAGCCC AGCCCTTCCT TTATTTCCAT
2521TGCCAACTTT CTTGTACAAA GTTGGcatta taagaaagca ttgcttatca atttgttgca
2581acgaac

Download FASTA (ORF) (Full)

GPP Web Portal Terms of Service

Effective Date: December 8, 2025
By using this site, you agree to our terms and conditions below.

Overview of Terms

The data made available on this website were generated for research purposes and are not intended for clinical or commercial uses. Commercial use (or other use for profit-making purposes) of the GPP Web Portal and its tools, is not permitted under these terms and may require a separate license agreement from Broad or its contributors. For more information, please contact partnering@broadinstitute.org.

The original data may be subject to rights claimed by third parties, including but not limited to, patent, copyright, other intellectual property rights, biodiversity-related access and benefit-sharing rights. It is the responsibility of users of Broad Institute services to ensure that their use of the data does not infringe any of the rights of such third parties.

Any questions or comments concerning these Terms of Use can be addressed to: legal@broadinstitute.org.

By accessing and viewing this GPP Web Portal, you agree to the following terms and conditions:

Attribution

You agree to acknowledge the Broad Institute (e.g., in publications, services or products) for any of your use of its online services, databases or software in accordance with good scientific practice. You agree to use the acknowledgment wording provided for the relevant tools as indicated on the FAQ for each tool.

Updating the Terms of Use

We reserve the right to update these Terms of Use at any time. When alterations are inevitable, we will attempt to give reasonable notice of any changes by placing a notice on our website, but you may wish to check each time you use the website. The date of the most recent revision will appear on this, the "GPP Web Portal Terms of Use" page. If you do not agree to these changes, please do not continue to use our online services. We will also make available an archived copy of the previous Terms of Use for comparison.

Indemnification and Disclaimer of Warranties

You are using this GPP Web Portal at your own risk, and you hereby agree to hold Broad and its contributors and their trustees, directors, officers, employees, and affiliated investigators harmless for any third party claims which may arise from your use of the GPP Web Portal, the tools available therein, or any portion thereof. Further, you agree to indemnify Broad, its contributors, and its and their trustees, directors, officers, employees, affiliated investigators, students, and affiliates for any loss, costs, claims, damages, or other liabilities arising from any unpermitted commercial or profit-making use you make of the GPP Web Portal. The GPP Web Portal is a research tool and is provided "as is". Broad does not represent that the GPP Web Portal is free of errors or bugs or suitable for any particular tasks.

ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE IMPLIED WARRANTIES OF MERCHANTABILITY, FITNESS FOR A PARTICULAR PURPOSE, NONINFRINGEMENT, OR THE ABSENCE OF LATENT OR OTHER DEFECTS ARE DISCLAIMED. IN NO EVENT SHALL BROAD OR ITS CONTRIBUTORS BE LIABLE FOR ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL, EXEMPLARY, OR CONSEQUENTIAL DAMAGES HOWEVER CAUSED AND ON ANY THEORY OF LIABILITY, WHETHER IN CONTRACT, STRICT LIABILITY, OR TORT (INCLUDING NEGLIGENCE OR OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THE GPP WEB PORTAL, EVEN IF ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.

Governing Law

The terms and conditions herein shall be construed, governed, interpreted, and applied in accordance with the internal laws of the Commonwealth of Massachusetts, U.S.A. Furthermore, by accessing, downloading, or using the Database, You consent to the personal jurisdiction of, and venue in, the state and federal courts within Massachusetts with respect to Your download or use of the Database.