Construct: ORF ccsbBroadEn_04292
Construct Description:
- Construct Type:
- ORF
- Other Identifiers:
- ORF010752.1_s300c1, BRDN0000396471
- DNA Barcode:
- None
- Epitope Tag:
- None
- Notes:
- No stop codon in insert
Originally Annotated References:
- Gene:
- INHBE (83729)
Vector Information:
- Vector Backbone:
- pDONR223
- Pol II Cassette 1:
- n/a
- Pol II Cassette 2:
- n/a
- Selection Marker:
- n/a
- Visible Reporter:
- n/a
- Epitope Tag:
- n/a
Current transcripts matched by this ORF:
| Taxon | Gene | Symbol | Description | Transcript | Nuc. Match %[?]A simple nucleotide-based global alignment percentage, calculated as follows: total nt. matches ---------------------------------- aligned length (incl. gaps) |
Prot. Match %[?]A simple amino acid-based global alignment percentage, calculated as follows: total aa. matches ---------------------------------- aligned length (incl. gaps) |
Match Diffs[?]This field may contain sequence annotations in HGVS format. For more information about HGVS annotations, please refer to the HGVS Quick Reference Guide. | |
|---|---|---|---|---|---|---|---|---|
| 1 | human | 83729 | INHBE | inhibin subunit beta E | NM_031479.5 | 100% | 100% |
Sequence Information
Note: uppercase bases indicate empirically verified sequence.
- ORF start:
- 66
- ORF end:
- 1116
- ORF length:
- 1050
- Sequence:
-
1 gttcgttgca acaaattgat gagcaatgct tttttataat gccaaCTTTG TACAAAAAAG 61 TTGGCATGCG GCTCCCTGAT GTCCAGCTCT GGCTGGTGCT GCTGTGGGCA CTGGTGCGAG 121 CACAGGGGAC AGGGTCTGTG TGTCCCTCCT GTGGGGGCTC CAAACTGGCA CCCCAAGCAG 181 AACGAGCTCT GGTGCTGGAG CTAGCCAAGC AGCAAATCCT GGATGGGTTG CACCTGACCA 241 GTCGTCCCAG AATAACTCAT CCTCCACCCC AGGCAGCGCT GACCAGAGCC CTCCGGAGAC 301 TACAGCCAGG GAGTGTGGCT CCAGGGAATG GGGAGGAGGT CATCAGCTTT GCTACTGTCA 361 CAGACTCCAC TTCAGCCTAC AGCTCCCTGC TCACTTTTCA CCTGTCCACT CCTCGGTCCC 421 ACCACCTGTA CCATGCCCGC CTGTGGCTGC ACGTGCTCCC CACCCTTCCT GGCACTCTTT 481 GCTTGAGGAT CTTCCGATGG GGACCAAGGA GGAGGCGCCA AGGGTCCCGC ACTCTCCTGG 541 CTGAGCACCA CATCACCAAC CTGGGCTGGC ATACCTTAAC TCTGCCCTCT AGTGGCTTGA 601 GGGGTGAGAA GTCTGGTGTC CTGAAACTGC AACTAGACTG CAGACCCCTA GAAGGCAACA 661 GCACAGTTAC TGGACAACCG AGGCGGCTCT TGGACACAGC AGGACACCAG CAGCCCTTCC 721 TAGAGCTTAA GATCCGAGCC AATGAGCCTG GAGCAGGCCG GGCCAGGAGG AGGACCCCCA 781 CCTGTGAGCC TGCGACCCCC TTATGTTGCA GGCGAGACCA TTACGTAGAC TTCCAGGAAC 841 TGGGATGGCG GGACTGGATA CTGCAGCCCG AGGGGTACCA GCTGAATTAC TGCAGTGGGC 901 AGTGCCCTCC CCACCTGGCT GGCAGCCCAG GCATTGCTGC CTCTTTCCAT TCTGCCGTCT 961 TCAGCCTCCT CAAAGCCAAC AATCCTTGGC CTGCCAGTAC CTCCTGTTGT GTCCCTACTG 1021 CCCGAAGGCC CCTCTCTCTC CTCTACCTGG ATCATAATGG CAATGTGGTC AAGACGGATG 1081 TGCCAGATAT GGTGGTGGAG GCCTGTGGCT GCAGCTACCC AACTTTCTTG TACAAAGTtg 1141 gcattataag aaagcattgc ttatcaattt gttgcaacga ac