Construct: ORF ccsbBroadEn_04700

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF007449.1_s300c1, BRDN0000455550
DNA Barcode:
None
Epitope Tag:
None
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
TM4SF19 (116211)

Vector Information:

Vector Backbone:
pDONR223
Pol II Cassette 1:
n/a
Pol II Cassette 2:
n/a
Selection Marker:
n/a
Visible Reporter:
n/a
Epitope Tag:
n/a

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 116211 TM4SF19 transmembrane 4 L six famil... NM_138461.4 100% 100%
2 human 116211 TM4SF19 transmembrane 4 L six famil... NM_001204898.2 87.5% 87.5% 201_202ins78
3 human 116211 TM4SF19 transmembrane 4 L six famil... NM_001204897.2 85.3% 58.8% 445_446insGTAG;624_726del
4 human 100534611 TM4SF19-TCTEX1D2 TM4SF19-TCTEX1D2 readthroug... NR_037950.1 61.3% 1_158del;786_1022del
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
69
ORF end:
696
ORF length:
627
Sequence:
1gttcgttgca acaaattgat gagcaatgct tttttataat gccaacttTG TACAAAAAAG
61TTGGCACCAT GGTGTCCTCT CCCTGCACGC AGGCAAGCTC ACGGACTTGC TCCCGTATCC
121TGGGACTGAG CCTTGGGACT GCAGCCCTGT TTGCTGCTGG GGCCAACGTG GCACTCCTCC
181TTCCTAACTG GGATGTCACC TACCTGTTGA GGGGCCTCCT TGGCAGGCAT GCCATGCTGG
241GAACTGGGCT CTGGGGAGGA GGCCTCATGG TACTCACTGC AGCTATCCTC ATCTCCTTGA
301TGGGCTGGAG ATACGGCTGC TTCAGTAAGA GTGGGCTCTG TCGAAGCGTG CTTACTGCTC
361TGTTGTCAGG TGGCCTGGCT TTACTTGGAG CCCTGATTTG CTTTGTCACT TCTGGAGTTG
421CTCTGAAAGA TGGTCCTTTT TGCATGTTTG ATGTTTCATC CTTCAATCAG ACACAAGCTT
481GGAAATATGG TTACCCATTC AAAGACCTGC ATAGTAGGAA TTATCTGTAT GACCGTTCGC
541TCTGGAACTC CGTCTGCCTG GAGCCCTCTG CAGCTGTTGT CTGGCACGTG TCCCTCTTCT
601CCGCCCTTCT GTGCATCAGC CTGCTCCAGC TTCTCCTGGT GGTCGTTCAT GTCATCAACA
661GCCTCCTGGG CCTTTTCTGC AGCCTCTGCG AGAAGTTGCC AACTTTCTTG TACAAAGTTG
721Gcattataag aaagcattgc ttatcaattt gttgcaacga ac

Download FASTA (ORF) (Full)

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