Construct: ORF ccsbBroadEn_05499

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF015603.1_s300c1, BRDN0000398204
DNA Barcode:
None
Epitope Tag:
None
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
RSPH4A (345895)

Vector Information:

Vector Backbone:
pDONR223
Pol II Cassette 1:
n/a
Pol II Cassette 2:
n/a
Selection Marker:
n/a
Visible Reporter:
n/a
Epitope Tag:
n/a

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 345895 RSPH4A radial spoke head component 4A NM_001161664.1 100% 100%
2 human 345895 RSPH4A radial spoke head component 4A XM_017010826.1 100% 100%
3 human 345895 RSPH4A radial spoke head component 4A NM_001010892.3 83.7% 76.8% 1661_1796del;1937_2148del
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
69
ORF end:
1869
ORF length:
1800
Sequence:
1gttcgttgca acaaattgat gagcaatgct tttttataat gccaacttTG TACAAAAAAG
61TTGGCACCAT GGAGGACTCA ACCTCCCCGA AGCAAGAAAA AGAAAACCAA GAAGAACTAG
121GGGAAACAAG GCGGCCATGG GAAGGAAAGA CAGCAGCTTC TCCCCAATAT TCTGAGCCTG
181AGTCGTCTGA GCCCTTGGAG GCGAAGCAGG GGCCAGAAAC TGGACGCCAG TCCCGAAGCA
241GCCGTCCTTG GAGCCCGCAG TCTAGAGCCA AGACGCCTCT GGGTGGCCCC GCGGGACCAG
301AAACATCATC ACCTGCTCCT GTCTCTCCGC GGGAGCCCTC TTCCTCTCCT TCTCCCCTGG
361CTCCGGCCAG ACAAGACCTC GCGGCACCAC CTCAGTCGGA CAGGACCACG AGTGTGATTC
421CTGAAGCTGG GACACCTTAT CCTGATCCTT TGGAACAATC ATCTGATAAA AGAGAATCAA
481CTCCTCATCA CACAAGCCAG TCAGAAGGAA ACACCTTTCA ACAGTCTCAG CAACCCAAAC
541CCCACCTGTG TGGACGAAGG GACGTGAGCT ATAACAACGC TAAACAGAAA GAGCTGAGAT
601TTGACGTTTT TCAGGAGGAA GACTCAAACA GTGACTATGA TTTACAGCAG CCGGCGCCTG
661GGGGCTCTGA AGTGGCCCCC AGCATGCTTG AGATCACCAT TCAGAATGCT AAGGCTTACC
721TGCTGAAGAC TAGCAGCAAT TCGGGCTTTA ATCTATATGA TCATCTTTCT AATATGTTGA
781CCAAGATATT AAATGAGCGT CCTGAAAATG CTGTTGACAT CTTTGAAAAT ATTAGCCAAG
841ATGTGAAGAT GGCACATTTT AGTAAAAAAT TTGATGCACT ACAAAATGAG AATGAGTTGC
901TTCCAACATA TGAAATAGCA GAAAAGCAAA AGGCTCTTTT TCTCCAGGGA CATTTGGAAG
961GAGTTGACCA AGAATTGGAA GATGAAATAG CAGAAAACGC TCTTCCAAAT GTAATGGAGT
1021CAGCTTTTTA TTTTGAACAA GCTGGAGTTG GTTTGGGCAC AGATGAGACA TACCGCATAT
1081TTCTTGCCCT CAAGCAGCTT ACTGATACCC ACCCAATCCA AAGATGCCGC TTCTGGGGAA
1141AGATCTTGGG TCTGGAAATG AATTATATTG TAGCTGAAGT GGAATTTCGT GAGGGGGAAG
1201ATGAAGAGGA AGTGGAAGAG GAAGATGTAG CTGAAGAGAG GGACAATGGA GAAAGTGAAG
1261CTCATGAAGA TGAGGAAGAT GAATTACCAA AGTCCTTTTA CAAGGCCCCA CAGGCTATAC
1321CAAAAGAAGA AAGTAGAACA GGTGCCAACA AATATGTCTA TTTTGTTTGC AATGAACCAG
1381GAAGACCATG GGTGAAGTTA CCACCAGTTA TACCTGCACA AATTGTTATT GCAAGAAAAA
1441TCAAGAAATT TTTCACTGGG CGATTGGATG CTCCCATCAT AAGCTACCCA CCTTTCCCAG
1501GAAATGAGAG TAATTATTTA CGAGCACAAA TTGCCCGAAT TTCAGCAGGA ACCCACGTCA
1561GTCCTCTAGG ATTTTATCAG TTTGGTGAAG AGGAAGGAGA GGAGGAGGAA GAGGCAGAAG
1621GTGGGCGAAA TAGCTTTGAG GAAAACCCTG ATTTTGAAGG CATCCAAGTG ATTGATCTAG
1681TAGAATCCCT ATCCAATTGG GTTCATCATG TACAGCATAT TCTCTCTCAG AGATTCAGAA
1741TATACCCCCC TGGACAACAC GGTTATCCTC AAATCTCATT CCACAATATG CTATTGCAGT
1801CCTTCAATCC AACCTTTGGC CTGGAGCATA TGCCTTCTCC AATGGCAAAA AGTTTGAAAA
1861TTTCTACATT GCCAACTTTC TTGTACAAAG Ttggcattat aagaaagcat tgcttatcaa
1921tttgttgcaa cgaac

Download FASTA (ORF) (Full)