Construct: ORF ccsbBroadEn_05819

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF017316.1_s300c1, BRDN0000385082
DNA Barcode:
None
Epitope Tag:
None
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
SLC25A6 (293)

Vector Information:

Vector Backbone:
pDONR223
Pol II Cassette 1:
n/a
Pol II Cassette 2:
n/a
Selection Marker:
n/a
Visible Reporter:
n/a
Epitope Tag:
n/a

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 293 SLC25A6 solute carrier family 25 me... NM_001636.4 99.8% 100% 408C>T
2 human 292 SLC25A5 solute carrier family 25 me... NM_001152.5 78.7% 91.9% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
960
ORF length:
894
Sequence:
1gttcgttgca acaaattgat gagcaatgct tttttataat gccaaCTTTG TACAAAAAAG
61TTGGCATGAC GGAACAGGCC ATCTCCTTCG CCAAAGACTT CTTGGCCGGA GGCATCGCCG
121CCGCCATCTC CAAGACGGCC GTGGCTCCGA TCGAGCGGGT CAAGCTGCTG CTGCAGGTCC
181AGCACGCCAG CAAGCAGATC GCCGCCGACA AGCAGTACAA GGGCATCGTG GACTGCATTG
241TCCGCATCCC CAAGGAGCAG GGCGTGCTGT CCTTCTGGAG GGGCAACCTT GCCAACGTCA
301TTCGCTACTT CCCCACTCAA GCCCTCAACT TCGCCTTCAA GGATAAGTAC AAGCAGATCT
361TCCTGGGGGG CGTGGACAAG CACACGCAGT TCTGGAGGTA CTTTGCGGGC AACCTGGCCT
421CCGGCGGTGC GGCCGGCGCG ACCTCCCTCT GCTTCGTGTA CCCGCTGGAT TTTGCCAGAA
481CCCGCCTGGC AGCGGACGTG GGAAAGTCAG GCACAGAGCG CGAGTTCCGA GGCCTGGGAG
541ACTGCCTGGT GAAGATCACC AAGTCCGACG GCATCCGGGG CCTGTACCAG GGCTTCAGTG
601TCTCCGTGCA GGGCATCATC ATCTACCGGG CGGCCTACTT CGGCGTGTAC GATACGGCCA
661AGGGCATGCT CCCCGACCCC AAGAACACGC ACATCGTGGT GAGCTGGATG ATCGCGCAGA
721CCGTGACGGC CGTGGCCGGC GTGGTGTCCT ACCCCTTCGA CACGGTGCGG CGGCGCATGA
781TGATGCAGTC CGGGCGCAAA GGAGCTGACA TCATGTACAC GGGCACCGTC GACTGTTGGA
841GGAAGATCTT CAGAGATGAG GGGGGCAAGG CCTTCTTCAA GGGTGCGTGG TCCAACGTCC
901TGCGGGGCAT GGGGGGCGCC TTCGTGCTGG TCCTGTACGA CGAGCTCAAG AAGGTGATCT
961ACCCAACTTT CTTGTACAAA GTtggcatta taagaaagca ttgcttatca atttgttgca
1021acgaac

Download FASTA (ORF) (Full)