Construct: ORF ccsbBroadEn_05892

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF008486.1_s300c1, BRDN0000391112
DNA Barcode:
None
Epitope Tag:
None
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
BLK (640)

Vector Information:

Vector Backbone:
pDONR223
Pol II Cassette 1:
n/a
Pol II Cassette 2:
n/a
Selection Marker:
n/a
Visible Reporter:
n/a
Epitope Tag:
n/a

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 640 BLK BLK proto-oncogene, Src fam... NM_001715.3 99.9% 100% 330T>C
2 human 640 BLK BLK proto-oncogene, Src fam... XM_011543824.1 95% 95.1% 330T>C;952_1029del
3 human 640 BLK BLK proto-oncogene, Src fam... XM_011543825.3 95% 95.1% 330T>C;952_1029del
4 human 640 BLK BLK proto-oncogene, Src fam... NM_001330465.2 85.8% 85.9% 0_1ins213;117T>C
5 human 640 BLK BLK proto-oncogene, Src fam... XM_011543827.1 81.6% 81.7% 0_1ins213;117T>C;739_816del
6 human 640 BLK BLK proto-oncogene, Src fam... XM_011543828.3 62.7% 51.1% (many diffs)
7 human 640 BLK BLK proto-oncogene, Src fam... XM_011543829.3 62.5% 51.2% (many diffs)
8 mouse 12143 Blk B lymphoid kinase NM_007549.2 83.9% 86.1% (many diffs)
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Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
1581
ORF length:
1515
Sequence:
1gttcgttgca acaaattgat gagcaatgct tttttataat gccaaCTTTG TACAAAAAAG
61TTGGCATGGG GCTGGTAAGT AGCAAAAAGC CGGACAAGGA AAAGCCGATC AAAGAGAAGG
121ACAAGGGCCA ATGGAGCCCC CTGAAGGTCA GCGCCCAAGA CAAGGACGCC CCGCCACTGC
181CGCCCCTGGT TGTCTTCAAC CACCTTACTC CTCCACCGCC CGATGAACAC CTGGATGAAG
241ACAAGCATTT CGTGGTGGCT CTGTATGACT ACACCGCTAT GAATGATCGG GACCTGCAGA
301TGCTGAAGGG GGAGAAGCTA CAGGTCCTGA AGGGAACTGG AGACTGGTGG CTGGCCAGGT
361CACTCGTCAC AGGAAGAGAA GGCTATGTGC CCAGCAACTT TGTGGCCCGA GTGGAGAGCC
421TGGAAATGGA AAGGTGGTTC TTTAGATCAC AGGGTCGGAA GGAGGCTGAG AGGCAGCTTC
481TTGCTCCAAT CAACAAGGCC GGCTCCTTTC TTATCAGAGA GAGTGAAACC AACAAAGGTG
541CCTTCTCCCT GTCTGTGAAG GATGTCACCA CCCAGGGGGA GCTGATCAAG CACTATAAGA
601TCCGCTGCCT GGATGAAGGG GGCTACTACA TCTCCCCCCG GATCACCTTC CCCTCGCTCC
661AGGCCCTGGT GCAGCACTAT TCTAAGAAGG GGGATGGTCT ATGCCAGAGG CTGACCCTGC
721CCTGTGTGCG CCCGGCCCCG CAGAATCCCT GGGCCCAGGA TGAATGGGAG ATCCCCCGGC
781AGTCTCTCAG GCTGGTCAGG AAACTCGGGT CTGGACAATT CGGCGAAGTC TGGATGGGTT
841ACTACAAAAA CAACATGAAG GTGGCCATTA AGACGCTGAA GGAGGGAACC ATGTCTCCAG
901AAGCCTTTCT GGGTGAGGCC AACGTGATGA AGGCTCTGCA GCACGAGCGG CTGGTCCGAC
961TCTACGCAGT GGTCACCAAG GAGCCCATCT ACATTGTCAC CGAGTACATG GCCAGAGGAT
1021GCCTGCTGGA TTTCCTGAAG ACAGATGAAG GGAGCAGATT GTCACTCCCA AGGCTGATTG
1081ACATGTCGGC GCAGATTGCT GAAGGGATGG CATACATTGA GCGCATGAAT TCCATCCACC
1141GCGACCTGCG GGCGGCCAAC ATCCTGGTGT CTGAGGCCTT GTGCTGCAAA ATTGCTGATT
1201TTGGCTTGGC TCGAATCATC GACAGTGAAT ACACGGCCCA AGAGGGGGCC AAGTTCCCCA
1261TCAAGTGGAC AGCCCCGGAA GCCATCCACT TCGGGGTCTT CACCATCAAA GCAGACGTGT
1321GGTCGTTTGG AGTCCTCCTG ATGGAAGTTG TCACTTATGG GCGGGTGCCA TACCCAGGGA
1381TGAGCAACCC CGAGGTCATC CGCAACCTGG AGCGCGGCTA CCGCATGCCG CGCCCCGACA
1441CCTGCCCGCC CGAGCTGTAC CGCGGCGTCA TCGCCGAGTG CTGGCGCAGC CGGCCCGAGG
1501AGCGGCCCAC CTTCGAGTTC CTGCAGTCGG TGCTGGAGGA CTTCTACACG GCCACCGAGC
1561GGCAGTACGA GCTGCAGCCC TACCCAACTT TCTTGTACAA AGTtggcatt ataagaaagc
1621attgcttatc aatttgttgc aacgaac

Download FASTA (ORF) (Full)