Construct: ORF ccsbBroadEn_06341
Construct Description:
- Construct Type:
- ORF
- Other Identifiers:
- ORF012807.1_s300c1, BRDN0000455201
- DNA Barcode:
- None
- Epitope Tag:
- None
- Notes:
- No stop codon in insert
Originally Annotated References:
- Gene:
- GUCA2B (2981)
Vector Information:
- Vector Backbone:
- pDONR223
- Pol II Cassette 1:
- n/a
- Pol II Cassette 2:
- n/a
- Selection Marker:
- n/a
- Visible Reporter:
- n/a
- Epitope Tag:
- n/a
Current transcripts matched by this ORF:
| Taxon | Gene | Symbol | Description | Transcript | Nuc. Match %[?]A simple nucleotide-based global alignment percentage, calculated as follows: total nt. matches ---------------------------------- aligned length (incl. gaps) |
Prot. Match %[?]A simple amino acid-based global alignment percentage, calculated as follows: total aa. matches ---------------------------------- aligned length (incl. gaps) |
Match Diffs[?]This field may contain sequence annotations in HGVS format. For more information about HGVS annotations, please refer to the HGVS Quick Reference Guide. | |
|---|---|---|---|---|---|---|---|---|
| 1 | human | 2981 | GUCA2B | guanylate cyclase activator 2B | NM_007102.3 | 99.7% | 100% | 18A>G |
Sequence Information
Note: uppercase bases indicate empirically verified sequence.
- ORF start:
- 69
- ORF end:
- 405
- ORF length:
- 336
- Sequence:
-
1 gttcgttgca acaaattgat gagcaatgct tttttataat gccaacttTG TACAAAAAAG 61 TTGGCACCAT GGGCTGCAGG GCTGCGTCAG GGCTCCTGCC AGGAGTGGCC GTGGTCCTCC 121 TGCTGCTGCT GCAGAGCACA CAGTCAGTCT ACATCCAGTA CCAAGGCTTC CGGGTCCAGC 181 TGGAATCCAT GAAGAAGCTG AGTGACCTGG AGGCACAGTG GGCACCCAGC CCCCGCCTGC 241 AGGCCCAGAG CCTCCTGCCC GCCGTGTGCC ACCACCCTGC TCTGCCTCAG GACCTTCAGC 301 CTGTCTGCGC CTCGCAGGAG GCTTCCAGCA TCTTCAAGAC CCTGAGGACC ATCGCTAACG 361 ACGACTGTGA GCTGTGTGTG AACGTTGCGT GTACCGGCTG CCTCTTGCCA ACTTTCTTGT 421 ACAAAGTTGG cattataaga aagcattgct tatcaatttg ttgcaacgaa c