Construct: ORF ccsbBroadEn_08013

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF007751.1_s300c1, BRDN0000456043
DNA Barcode:
None
Epitope Tag:
None
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
ANKRD2 (26287)

Vector Information:

Vector Backbone:
pDONR223
Pol II Cassette 1:
n/a
Pol II Cassette 2:
n/a
Selection Marker:
n/a
Visible Reporter:
n/a
Epitope Tag:
n/a

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 26287 ANKRD2 ankyrin repeat domain 2 NM_020349.4 99.9% 100% 936A>G
2 human 26287 ANKRD2 ankyrin repeat domain 2 NM_001346793.2 92.4% 92.5% 0_1ins81;855A>G
3 human 26287 ANKRD2 ankyrin repeat domain 2 NM_001129981.3 90.7% 90.8% 734_735ins99;837A>G
4 human 26287 ANKRD2 ankyrin repeat domain 2 NM_001291219.3 83.2% 83.3% 0_1ins81;653_654ins99;756A>G
5 human 26287 ANKRD2 ankyrin repeat domain 2 NM_001291218.1 80.6% 80.7% 1_258del;1194A>G
6 mouse 56642 Ankrd2 ankyrin repeat domain 2 (st... NM_020033.1 78% 81.3% (many diffs)
7 mouse 56642 Ankrd2 ankyrin repeat domain 2 (st... XM_017318264.1 71.3% 73.8% (many diffs)
8 mouse 56642 Ankrd2 ankyrin repeat domain 2 (st... XM_006527234.3 69.8% 73.8% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
69
ORF end:
1149
ORF length:
1080
Sequence:
1gttcgttgca acaaattgat gagcaatgct tttttataat gccaacttTG TACAAAAAAG
61TTGGCACCAT GGCAAAGGCG CCCAGCTGGG CAGGGGTGGG TGCTCTGGCC TATAAAGCCC
121CCGAGGCCCT GTGGCCTGCA GAGGCGGTTA TGGACGGCAC CATGGAGGAC TCCGAGGCGG
181TGCAGAGGGC CACAGCGCTC ATCGAGCAGC GGCTGGCACA GGAGGAGGAG AATGAGAAAC
241TCCGAGGAGA CGCACGCCAG AAGCTGCCCA TGGACTTGCT GGTGCTGGAG GATGAGAAGC
301ACCACGGGGC TCAGAGTGCA GCCCTGCAGA AGGTGAAGGG CCAAGAGCGC GTGCGCAAGA
361CGTCCCTGGA CCTGCGGCGG GAGATCATCG ATGTGGGCGG GATCCAGAAC CTCATCGAGC
421TGCGGAAGAA ACGCAAGCAG AAGAAGCGGG ACGCTCTGGC CGCCTCGCAT GAGCCGCCCC
481CAGAGCCCGA GGAGATCACT GGCCCTGTGG ATGAGGAGAC CTTCCTGAAA GCTGCGGTGG
541AGGGGAAAAT GAAGGTCATT GAGAAGTTCC TGGCTGACGG GGGGTCAGCC GACACGTGCG
601ACCAGTTCCG TCGGACAGCA CTGCACCGAG CTTCCCTGGA AGGCCACATG GAAATCCTGG
661AGAAGCTTCT AGATAATGGG GCCACTGTGG ACTTCCAGGA TCGGCTGGAC TGCACAGCCA
721TGCATTGGGC CTGCCGCGGG GGCCACTTAG AGGTGGTGAA ACTTCTGCAA AGCCATGGAG
781CAGACACCAA TGTGAGGGAT AAGCTGCTGA GCACCCCGCT GCACGTGGCA GTCCGGACAG
841GGCAGGTGGA GATTGTGGAG CACTTTCTAT CCCTGGGCCT GGAAATCAAT GCCAGAGACA
901GGGAAGGGGA TACTGCCCTG CATGACGCTG TGAGGCTCAA CCGCTACAAA ATCATCAAAC
961TGCTGCTCCT GCATGGGGCT GACATGATGA CCAAGAACCT GGCGGGAAAG ACCCCGACGG
1021ACCTGGTGCA GCTCTGGCAG GCTGATACCC GGCACGCCCT GGAGCATCCT GAGCCGGGGG
1081CTGAGCATAA CGGGCTGGAG GGGCCTAATG ATAGTGGGCG AGAGACCCCT CAGCCTGTGC
1141CAGCCCAGTT GCCAACTTTC TTGTACAAAG TTGGcattat aagaaagcat tgcttatcaa
1201tttgttgcaa cgaac

Download FASTA (ORF) (Full)

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