Construct: ORF ccsbBroadEn_09346

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF013367.1_s300c1, BRDN0000386817
DNA Barcode:
None
Epitope Tag:
None
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
DTD1 (92675)

Vector Information:

Vector Backbone:
pDONR223
Pol II Cassette 1:
n/a
Pol II Cassette 2:
n/a
Selection Marker:
n/a
Visible Reporter:
n/a
Epitope Tag:
n/a

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 92675 DTD1 D-aminoacyl-tRNA deacylase 1 NM_080820.6 99.8% 99.5% 280C>A
2 human 92675 DTD1 D-aminoacyl-tRNA deacylase 1 XM_005260872.4 78.7% 78.4% 0_1ins132;148C>A
3 human 92675 DTD1 D-aminoacyl-tRNA deacylase 1 NM_001318043.2 78.5% 67.9% (many diffs)
4 mouse 66044 Dtd1 D-tyrosyl-tRNA deacylase 1 NM_025314.3 88.1% 94.7% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
693
ORF length:
627
Sequence:
1gttcgttgca acaaattgat gagcaatgct tttttataat gccaaCTTTG TACAAAAAAG
61TTGGCATGAA GGCCGTGGTG CAGCGCGTCA CCCGGGCCAG CGTCACAGTT GGAGGAGAGC
121AGATTAGTGC CATTGGAAGG GGCATATGTG TGTTGCTGGG TATTTCCCTG GAGGATACGC
181AGAAGGAACT GGAACACATG GTCCGAAAGA TTCTAAACCT GCGTGTATTT GAGGATGAGA
241GTGGGAAGCA CTGGTCGAAG AGTGTGATGG ACAAACAGTA CGAGATTCTG TGTGTCAGCC
301AGTTTACCCT CCAGTGTGTC CTGAAGGGAA ACAAGCCTGA TTTCAACCTA GCAATGCCCA
361CGGAGCAGGC AGAGGGCTTC TACAACAGCT TCCTGGAGCA GCTGCGTAAA ACATACAGGC
421CGGAGCTTAT CAAAGATGGC AAGTTTGGGG CCTACATGCA GGTGCACATT CAGAATGATG
481GGCCTGTGAC CATAGAGCTG GAATCGCCAG CTCCCGGCAC TGCTACCTCT GACCCAAAGC
541AGCTGTCAAA GCTCGAAAAA CAGCAGCAGA GGAAAGAAAA GACCAGAGCT AAGGGACCTT
601CTGAATCAAG CAAGGAAAGA AACACTCCCC GAAAAGAAGA CCGCAGTGCC AGCAGCGGGG
661CTGAGGGCGA CGTGTCCTCT GAACGGGAGC CGTACCCAAC TTTCTTGTAC AAAGTtggca
721ttataagaaa gcattgctta tcaatttgtt gcaacgaac

Download FASTA (ORF) (Full)