Construct: ORF ccsbBroadEn_09606

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF015953.1_s300c1, BRDN0000393323
DNA Barcode:
None
Epitope Tag:
None
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
PIWIL4 (143689)

Vector Information:

Vector Backbone:
pDONR223
Pol II Cassette 1:
n/a
Pol II Cassette 2:
n/a
Selection Marker:
n/a
Visible Reporter:
n/a
Epitope Tag:
n/a

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 143689 PIWIL4 piwi like RNA-mediated gene... NM_152431.3 99.9% 100% 1920C>A
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Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
2622
ORF length:
2556
Sequence:
1gttcgttgca acaaattgat gagcaatgct tttttataat gccaaCTTTG TACAAAAAAG
61TTGGCATGAG TGGAAGAGCC CGAGTGAAGG CCAGAGGCAT CGCCCGCAGC CCCAGTGCCA
121CAGAAGTGGG GCGCATCCAA GCCTCGCCAT TGCCTAGATC TGTTGATCTT AGTAACAATG
181AAGCATCCTC TAGCAATGGC TTCTTGGGAA CAAGCAGGAT CTCAACCAAC GATAAATATG
241GGATATCTTC TGGTGATGCT GGAAGTACCT TCATGGAAAG AGGTGTGAAA AACAAACAGG
301ACTTTATGGA TTTGAGTATC TGTACCAGAG AAAAATTGGC ACATGTGAGA AATTGTAAAA
361CAGGTTCCAG TGGAATACCT GTGAAACTGG TTACAAACCT CTTTAACTTA GATTTTCCCC
421AAGACTGGCA GCTATACCAG TACCATGTGA CATATATTCC AGATTTAGCA TCTAGAAGGC
481TGAGAATTGC TTTACTTTAT AGTCATAGTG AACTTTCCAA CAAAGCAAAA GCATTCGACG
541GTGCCATCCT TTTTCTGTCA CAAAAGCTAG AAGAAAAGGT CACAGAGTTG TCAAGTGAAA
601CTCAAAGAGG TGAGACTATA AAGATGACTA TCACCCTGAA GAGGGAGCTG CCATCAAGTT
661CTCCCGTGTG CATCCAGGTC TTCAATATCA TCTTCAGAAA GATCCTCAAA AAGTTGTCCA
721TGTACCAAAT TGGACGGAAC TTCTATAATC CTTCAGAGCC AATGGAAATT CCCCAGCACA
781AATTATCCCT TTGGCCTGGG TTTGCCATTT CTGTGTCATA TTTTGAAAGG AAGCTCCTGT
841TTAGTGCTGA TGTGAGTTAC AAAGTCCTCC GGAATGAGAC GGTTCTGGAA TTCATGACTG
901CTCTCTGTCA AAGAACTGGC TTGTCCTGTT TCACCCAGAC GTGTGAGAAG CAGCTAATAG
961GGCTCATTGT CCTTACAAGA TACAATAACA GAACCTACTC CATTGATGAC ATTGACTGGT
1021CAGTGAAGCC CACACACACC TTTCAGAAGC GGGATGGCAC CGAGATCACC TATGTGGATT
1081ACTACAAGCA GCAGTATGAT ATTACTGTAT CGGACCTGAA TCAGCCCATG CTTGTTAGTC
1141TGTTAAAGAA GAAGAGAAAT GACAACAGTG AGGCTCAGCT CGCCCACCTG ATACCTGAGC
1201TCTGCTTTCT AACAGGGCTG ACTGACCAGG CAACATCTGA TTTCCAGCTG ATGAAGGCTG
1261TGGCTGAAAA GACACGTCTC AGTCCTTCAG GCCGGCAGCA GCGCCTGGCC AGGCTTGTGG
1321ACAACATCCA GAGGAATACC AATGCTCGCT TTGAACTAGA GACCTGGGGA CTGCATTTTG
1381GAAGCCAGAT ATCTCTGACT GGCCGGATTG TGCCTTCAGA AAAAATATTA ATGCAAGACC
1441ACATATGTCA ACCTGTGTCT GCTGCTGACT GGTCCAAGGA TATTCGAACT TGCAAGATTT
1501TAAATGCACA GTCTTTGAAT ACCTGGTTGA TTTTATGTAG CGACAGAACT GAATATGTTG
1561CCGAGAGCTT TCTGAACTGC TTGAGAAGAG TTGCAGGTTC CATGGGATTT AATGTGGACT
1621ACCCCAAAAT CATAAAAGTA CAAGAAAATC CAGCTGCATT TGTTAGAGCT ATACAGCAAT
1681ATGTTGATCC TGATGTTCAG CTGGTAATGT GCATTCTGCC TTCTAATCAG AAGACCTATT
1741ATGATTCCAT TAAAAAATAT TTGAGCTCAG ACTGCCCAGT CCCAAGCCAA TGTGTGCTTG
1801CTCGGACCTT GAATAAACAG GGCATGATGA TGAGTATCGC CACCAAGATC GCTATGCAGA
1861TGACTTGCAA GCTCGGAGGC GAGCTGTGGG CTGTGGAAAT ACCTTTAAAG TCCCTGATGG
1921TGGTCGGTAT TGATGTCTGT AAAGATGCAC TCAGCAAGGA CGTGATGGTT GTTGGATGCG
1981TGGCAAGTGT TAACCCCAGA ATCACCAGGT GGTTTTCCCG CTGTATCCTT CAGAGAACAA
2041TGACTGATGT TGCAGATTGC TTGAAAGTTT TCATGACTGG AGCACTCAAC AAATGGTACA
2101AGTACAATCA TGATTTGCCA GCACGGATAA TTGTGTACCG TGCTGGTGTA GGGGATGGTC
2161AGCTGAAAAC ACTTATTGAA TATGAAGTCC CACAGCTGCT GAGCAGTGTG GCAGAATCCA
2221GCTCAAATAC CAGCTCAAGA CTGTCGGTGA TTGTGGTCAG GAAGAAGTGC ATGCCACGAT
2281TCTTTACCGA AATGAACCGC ACTGTACAGA ACCCCCCACT TGGCACTGTT GTGGATTCAG
2341AAGCAACACG TAACGAATGG TATGACTTTT ATCTGATCAG CCAGGTGGCC TGCCGGGGAA
2401CTGTTAGTCC TACCTACTAT AATGTCATCT ATGATGACAA CGGCTTGAAG CCCGACCATA
2461TGCAGAGACT TACATTCAAA TTGTGCCACC TGTACTACAA CTGGCCGGGC ATAGTCAGTG
2521TCCCAGCACC ATGTCAGTAT GCTCACAAGC TGACCTTTCT GGTGGCACAA AGCATTCATA
2581AAGAACCCAG TCTGGAATTA GCCAACCATC TCTTCTACCT GTGCCCAACT TTCTTGTACA
2641AAGTtggcat tataagaaag cattgcttat caatttgttg caacgaac

Download FASTA (ORF) (Full)

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