Construct: ORF ccsbBroadEn_10629

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF011827.1_s300c1, BRDN0000394311
DNA Barcode:
None
Epitope Tag:
None
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
LINC00898 (400932)

Vector Information:

Vector Backbone:
pDONR223
Pol II Cassette 1:
n/a
Pol II Cassette 2:
n/a
Selection Marker:
n/a
Visible Reporter:
n/a
Epitope Tag:
n/a

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 400932 LINC00898 long intergenic non-protein... NR_033377.1 12.4% 1_2138del;2328C>A;2661_4185del
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Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
69
ORF end:
591
ORF length:
522
Sequence:
1gttcgttgca acaaattgat gagcaatgct tttttataat gccaacttTG TACAAAAAAG
61TTGGCACCAT GGGCCTTGCA GGTTTCACCA AGCAAGAGCG GAGAAGACAC AGGCTGGACA
121AAGGAAGGTG GACGGGACAG CCAGCCGTGC AGCAGCCTCA CAGGACACAG CTACCAGACA
181GAGAGCACCA GCTGACACTC ATTCCTCCAG CACCAGGAAA TGCCACAGCA GAAGAGAGTC
241TTCAAGATGG GCCAGACACA CTTCTGCAGC ATGGTTGCTG GGAGCCTGCA CAGGCCAGGC
301ATTTCTCTAC AGGTGCAATT GAGAACTCAC TGAGGCAAAA GGGCCTTTGT CAACCCACAG
361AAGTGACAAG TCCAAGTGCA GACCAGGCTT CAGGTCCAGT TGCTCTTCAG AACTCAAAAT
421CCCATCTCTG CAGGTCTCAG CCAATCCTGC TCCCGCCTGT TTTTATTTCC TGCCCAGAGC
481AAGTACAGAA CCGAGGGCCA TCGATGGGCG AGAAATCACT GTGCCTCCAA GCTGTATTTT
541TCACCGTAAC AAGTCATTAC TTCTGTGCCC GGAGTCATTT CTCAGGATCT TTGCCAACTT
601TCTTGTACAA AGTtggcatt ataagaaagc attgcttatc aatttgttgc aacgaac

Download FASTA (ORF) (Full)