Construct: ORF ccsbBroadEn_11031

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF003961.1_s300c1, BRDN0000397975
DNA Barcode:
None
Epitope Tag:
None
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
PIK3R2 (5296)

Vector Information:

Vector Backbone:
pDONR223
Pol II Cassette 1:
n/a
Pol II Cassette 2:
n/a
Selection Marker:
n/a
Visible Reporter:
n/a
Epitope Tag:
n/a

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 5296 PIK3R2 phosphoinositide-3-kinase r... NM_005027.4 34.7% 34.7% 1_1425del;1911T>C
2 human 5296 PIK3R2 phosphoinositide-3-kinase r... NR_162071.1 20.1% (many diffs)
3 human 5296 PIK3R2 phosphoinositide-3-kinase r... NR_073517.2 18.8% 1_2029del;2515T>C;2789_4029del
4 mouse 18709 Pik3r2 phosphoinositide-3-kinase r... XM_006509600.3 33.6% 37.2% (many diffs)
5 mouse 18709 Pik3r2 phosphoinositide-3-kinase r... NM_008841.3 31% 34.3% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
825
ORF length:
759
Sequence:
1gttcgttgca acaaattgat gagcaatgct tttttataat gccaaCTTTG TACAAAAAAG
61TTGGCATGAA GCGTACTGCA ATTGAGGCCT TCAATGAGAC TATCAAGATC TTTGAAGAGC
121AGGGCCAGAC TCAAGAGAAA TGCAGCAAGG AATACCTGGA GCGCTTCCGG CGTGAGGGCA
181ACGAGAAAGA GATGCAAAGG ATCCTGCTGA ACTCCGAGCG GCTCAAGTCC CGCATTGCCG
241AGATCCATGA GAGCCGCACG AAGCTGGAGC AGCAGCTGCG GGCCCAGGCC TCGGACAACA
301GAGAGATCGA CAAGCGCATG AACAGCCTCA AGCCGGACCT CATGCAGCTG CGCAAGATCC
361GAGACCAGTA CCTCGTGTGG CTCACCCAGA AAGGCGCCCG GCAGAAGAAA ATCAACGAGT
421GGCTGGGGAT TAAAAATGAG ACTGAGGACC AGTACGCACT CATGGAGGAC GAGGACGATC
481TCCCGCACCA CGAGGAACGC ACTTGGTACG TGGGCAAGAT CAACCGCACG CAGGCAGAGG
541AGATGCTGAG CGGCAAGCGG GATGGCACCT TCCTCATCCG CGAGAGCAGC CAGCGGGGCT
601GCTACGCCTG CTCCGTGGTA GTGGACGGCG ACACCAAGCA CTGCGTCATC TACCGCACGG
661CCACCGGCTT CGGCTTCGCG GAGCCCTACA ACCTGTACGG GTCGCTGAAG GAGCTGGTGC
721TGCACTACCA GCACGCCTCG CTGGTGCAGC ACAACGACGC GCTCACCGTC ACCCTGGCGC
781ACCCAGTGCG CGCCCCGGGC CCCGGCCCGC CGCCTGCCGC CCGCTGCCCA ACTTTCTTGT
841ACAAAGTtgg cattataaga aagcattgct tatcaatttg ttgcaacgaa c

Download FASTA (ORF) (Full)

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