Construct: ORF ccsbBroadEn_11155

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF001503.1_s300c1, BRDN0000455428
DNA Barcode:
None
Epitope Tag:
None
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
SPRR3 (6707)

Vector Information:

Vector Backbone:
pDONR223
Pol II Cassette 1:
n/a
Pol II Cassette 2:
n/a
Selection Marker:
n/a
Visible Reporter:
n/a
Epitope Tag:
n/a

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 6707 SPRR3 small proline rich protein 3 NM_001097589.2 94.6% 94.6% (many diffs)
2 human 6707 SPRR3 small proline rich protein 3 NM_005416.2 94.6% 94.6% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
549
ORF length:
483
Sequence:
1gttcgttgca acaaattgat gagcaatgct tttttataat gccaaCTTTG TACAAAAAAG
61TTGGCATGAG TTCTTACCAG CAGAAGCAGA CCTTTACCCC ACCACCTCAG CTTCAACAGC
121AGCAGGTGAA ACAACCCAGC CAGCCTCCAC CTCAGGAAAT ATTTGTTCCC ACAACCAAGG
181AGCCATGCCA CTCAAAGGTT CCACAACCTG GAAACACAAA GATTCCAGAG CCAGGCTGTA
241CCAAGGTCCC TGAGCCAGGC TGTACCAAGG TCCCTGAGCC AGGTTGTACC AAGGTCCCTG
301AGCCAGGATG TACCAAGGTC CCTGAGCCAG GTTGTACCAA GGTCCCTGAG CCAGGCTACA
361CCAAGGTCCC TGAGCCAGGC AGCATCAAGG TCCCTGACCA AGGCTTCATC AAGTTTCCTG
421AGCCAGGTGC CATCAAAGTT CCTGAGCAAG GATACACCAA AGTTCCTGTG CCAGGCTACA
481CAAAGGTACC AGAGCCATGT CCTTCAACGG TCACTCCAGG CCCAGCTCAG CAGAAGACCA
541AGCAGAAGTA CCCAACTTTC TTGTACAAAG TTGGcattat aagaaagcat tgcttatcaa
601tttgttgcaa cgaac

Download FASTA (ORF) (Full)

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