Construct: ORF ccsbBroadEn_12926

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF014158.1_s300c1, BRDN0000389176
DNA Barcode:
None
Epitope Tag:
None
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
WDR34 (89891)

Vector Information:

Vector Backbone:
pDONR223
Pol II Cassette 1:
n/a
Pol II Cassette 2:
n/a
Selection Marker:
n/a
Visible Reporter:
n/a
Epitope Tag:
n/a

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 89891 WDR34 WD repeat domain 34 NM_052844.3 78% 78.1% 1_351del;627G>A;873C>T
2 human 89891 WDR34 WD repeat domain 34 XM_011519179.2 72.8% 72.9% 1_351del;627G>A;810_811ins84
3 mouse 71820 Wdr34 WD repeat domain 34 NM_001008498.2 64.8% 67.4% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
1323
ORF length:
1257
Sequence:
1gttcgttgca acaaattgat gagcaatgct tttttataat gccaaCTTTG TACAAAAAAG
61TTGGCATGGT CATCCGAGAG CTGAACAAGA ATTGGCAGAG CCACGCGTTT GATGGCTTCG
121AGGTGAACTG GACCGAGCAG CAGCAGATGG TGTCTTGTCT GTATACCCTG GGCTACCCGC
181CAGCCCAAGC GCAGGGTCTG CATGTGACCA GCATCTCCTG GAACTCCACT GGCTCTGTGG
241TGGCCTGTGC CTACGGCCGG CTGGACCATG GGGACTGGAG CACGCTTAAG TCCTTCGTGT
301GTGCCTGGAA CCTGGACCGG CGAGACCTGC GTCCCCAGCA ACCGTCGGCC GTGGTGGAGG
361TCCCCAGCGC TGTCCTGTGT CTGGCCTTCC ACCCCACGCA GCCCTCCCAC GTCGCAGGAG
421GGCTGTACAG TGGTGAGGTG TTGGTGTGGG ACCTGAGCCG TCTTGAGGAC CCGCTGCTGT
481GGCGCACAGG CCTGACGGAT GACACCCACA CAGACCCTGT GTCCCAGGTG GTGTGGCTGC
541CCGAGCCTGG GCACAGCCAC CGCTTCCAGG TGCTGAGTGT GGCCACTGAC GGGAAGGTGC
601TACTCTGGCA GGGCATCGGG GTAGGCCAGC TGCAGCTCAC AGAGGGCTTC GCCCTGGTCA
661TGCAGCAGCT GCCACGGAGC ACCAAGCTCA AGAAGCATCC CCGCGGGGAG ACCGAGGTGG
721GCGCCACGGC AGTGGCCTTC TCCAGCTTTG ACCCTAGGCT GTTCATTCTG GGCACGGAAG
781GCGGCTTCCC GCTCAAGTGT TCCCTGGCAG CTGGAGAGGC AGCCCTCACG CGGATGCCCA
841GCTCCGTGCC CCTGCGGGCC CCAGCACAGT TTACCTTCTC CCCCCACGGC GGTCCCATCT
901ACTCTGTGAG CTGTTCCCCC TTCCACAGGA ATCTCTTCCT GAGCGCTGGG ACTGACGGGC
961ATGTCCACCT GTACTCCATG CTGCAGGCCC CTCCCTTGAC TTCGCTGCAG CTCTCCCTCA
1021AGTATCTGTT TGCTGTGCGC TGGTCCCCAG TGCGGCCCTT GGTTTTTGCA GCTGCCTCTG
1081GGAAAGGTGA CGTGCAGCTG TTTGATCTCC AGAAAAGCTC CCAGAAACCC ACAGTTTTGA
1141TCAAGCAAAC CCAGGATGAA AGCCCTGTCT ACTGTCTGGA GTTCAACAGC CAGCAGACTC
1201AGCTCTTGGC TGCGGGCGAT GCCCAGGGCA CAGTGAAGGT GTGGCAGCTG AGCACAGAGT
1261TCACGGAACA AGGGCCCCGG GAAGCTGAGG ACCTGGACTG CCTGGCAGCA GAGGTGGCGG
1321CCTGCCCAAC TTTCTTGTAC AAAGTtggca ttataagaaa gcattgctta tcaatttgtt
1381gcaacgaac

Download FASTA (ORF) (Full)