Construct: ORF ccsbBroadEn_13421

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF013443.1_s300c1, BRDN0000388041
DNA Barcode:
None
Epitope Tag:
None
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
CCDC162P (221262)

Vector Information:

Vector Backbone:
pDONR223
Pol II Cassette 1:
n/a
Pol II Cassette 2:
n/a
Selection Marker:
n/a
Visible Reporter:
n/a
Epitope Tag:
n/a

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 221262 CCDC162P coiled-coil domain containi... NR_152435.1 8.9% (many diffs)
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Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
69
ORF end:
654
ORF length:
585
Sequence:
1gttcgttgca acaaattgat gagcaatgct tttttataat gccaacttTG TACAAAAAAG
61TTGGCACCAT GTTCAAAACT CTGCCAGAAA AGGCAGCTTT TAAAGCCTTA AAGCGAACTC
121TACAACTGAT AGCTCCTCTG CATGATATCG TGGCCTACCT TGTCAGTTTT GCTAAGCTTG
181GCAATTGTCC AGCATGTTTT GAATTTCCTC GAAGTCCCAA CCCTTTGAGA GGTGACTGGG
241GAGGAACTGA GGGCATTGGG TCTGAGCTTC AAGAGCTGCA GAACATGATT GACAGCCTCC
301AGAGCCCCCA AGACCCTATC CGGGTGGCCC AGGCACTCCT CCTCCGGAGG GAGGTTATAT
361TTTTGCAGTT TGACGCTGCA GTAAGGCATC TCATCCGAAG AACATTTTTG GCAGCTGGAA
421ATGTTCCTGC CTACCAGTCT GTCACAGACG GCATGTGCCA TGGGCTACCA GCACTGAGCA
481ACTCTCTCAG GAAGAGCATT TTTGCCTCAC AGCTCAGCCT GCCCCAGCCA CTGGATCCAC
541GGAGCCTCCA GGCATTTGAG CTGTTTCCTT GGAGAGCATT TCTGGAAGAT GGAGGACCAT
601TCCCAGTTAT GAGTAACAGC CCAGATACCC TAGAATATAA TATGCAGGTA GGATTGCCAA
661CTTTCTTGTA CAAAGTtggc attataagaa agcattgctt atcaatttgt tgcaacgaac

Download FASTA (ORF) (Full)