Construct: ORF ccsbBroadEn_13585
Construct Description:
- Construct Type:
- ORF
- Other Identifiers:
- ORF015220.1_s300c1, BRDN0000387664
- DNA Barcode:
- None
- Epitope Tag:
- None
- Notes:
- No stop codon in insert
Originally Annotated References:
- Gene:
- C17orf67 (339210)
Vector Information:
- Vector Backbone:
- pDONR223
- Pol II Cassette 1:
- n/a
- Pol II Cassette 2:
- n/a
- Selection Marker:
- n/a
- Visible Reporter:
- n/a
- Epitope Tag:
- n/a
Current transcripts matched by this ORF:
| Taxon | Gene | Symbol | Description | Transcript | Nuc. Match %[?]A simple nucleotide-based global alignment percentage, calculated as follows: total nt. matches ---------------------------------- aligned length (incl. gaps) |
Prot. Match %[?]A simple amino acid-based global alignment percentage, calculated as follows: total aa. matches ---------------------------------- aligned length (incl. gaps) |
Match Diffs[?]This field may contain sequence annotations in HGVS format. For more information about HGVS annotations, please refer to the HGVS Quick Reference Guide. | |
|---|---|---|---|---|---|---|---|---|
| 1 | human | 339210 | C17orf67 | chromosome 17 open reading ... | NM_001085430.4 | 100% | 100% |
Sequence Information
Note: uppercase bases indicate empirically verified sequence.
- ORF start:
- 69
- ORF end:
- 339
- ORF length:
- 270
- Sequence:
-
1 gttcgttgca acaaattgat gagcaatgct tttttataat gccaacttTG TACAAAAAAG 61 TTGGCACCAT GAAGACATTG CCTGTGCTCG TGCTGTCTCT TACCTTACTG ACTGTCTTCT 121 CAGAGACCTC CCCGATTTTG ACAGAGAAGC AGGCCAAACA GCTCCTAAGA TCTCGGCGAC 181 AGGATAGACC AAGCAAACCC GGATTCCCCG ATGAGCCAAT GCGGGAATAC ATGCACCACC 241 TGCTCGCCCT GGAGCATCGC GCTGAGGAGC AGTTCCTGGA GCACTGGCTG AACCCTCACT 301 GCAAACCCCA CTGTGACAGG AACAGGATTC ATCCTGTGTT GCCAACTTTC TTGTACAAAG 361 Ttggcattat aagaaagcat tgcttatcaa tttgttgcaa cgaac