Construct: ORF ccsbBroadEn_14332

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF008506.1_s300c1, BRDN0000386712
DNA Barcode:
None
Epitope Tag:
None
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
CEACAM21 (90273)

Vector Information:

Vector Backbone:
pDONR223
Pol II Cassette 1:
n/a
Pol II Cassette 2:
n/a
Selection Marker:
n/a
Visible Reporter:
n/a
Epitope Tag:
n/a

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 90273 CEACAM21 CEA cell adhesion molecule 21 NM_033543.6 50.8% 49% 423_424ins83;488T>C;490_876del
2 human 90273 CEACAM21 CEA cell adhesion molecule 21 XM_005278397.4 50.8% 49% 423_424ins83;488T>C;490_876del
3 human 90273 CEACAM21 CEA cell adhesion molecule 21 NM_001098506.4 50.7% 48.8% 423_424ins83;488T>C;490_879del
4 human 90273 CEACAM21 CEA cell adhesion molecule 21 XM_005278396.4 50.7% 48.8% 423_424ins83;488T>C;490_879del
5 human 90273 CEACAM21 CEA cell adhesion molecule 21 XM_017027432.2 46.6% 40% (many diffs)
6 human 90273 CEACAM21 CEA cell adhesion molecule 21 XM_017027430.1 46.5% 39.8% (many diffs)
7 human 90273 CEACAM21 CEA cell adhesion molecule 21 XM_017027431.1 46.5% 39.8% (many diffs)
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Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
639
ORF length:
573
Sequence:
1gttcgttgca acaaattgat gagcaatgct tttttataat gccaaCTTTG TACAAAAAAG
61TTGGCATGGG GCCCCCCTCA GCTTGTCCCC ACAGAGAATG CATCCCCTGG CAGGGGCTCT
121TGCTCACAGC CTCACTTTTA ACTTTCTGGA ACGCACCCAC CACTGCCTGG CTCTTTATTG
181CATCAGCGCC CTTTGAAGTT GCTGAAGGGG AGAATGTTCA TCTCTCTGTG GTTTATCTGC
241CCGAGAATCT TTACAGCTAT GGCTGGTACA AAGGGAAAAC GGTGGAGCCC AACCAGCTAA
301TCGCAGCATA TGTAATAGAC ACTCACGTTA GGACTCCAGG GCCTGCATAC AGCGGTCGAG
361AGACAATATC ACCCAGTGGA GATCTGCATT TCCAGAACGT CACCCTAGAG GACACGGGAT
421ACTACAACCT ACAAGTCACA TACAGAAATT CTCAGATTGA ACAGGCATCT CACCATCTCC
481GTGTATACGG AGAATGTTCT AAATTTGACT CTGAGATCTC TGAGGATGCA GCATGGCCCC
541AAGACACTTT CTGTTGGTCA CTCTATCCAC AGAGTCAGTG GCTCAGCCCT CCATCCAAGC
601CAGCAGCACC ACAGTCACAG AGAAGGGCTC CGTGGCCTGC CCAACTTTCT TGTACAAAGT
661tggcattata agaaagcatt gcttatcaat ttgttgcaac gaac

Download FASTA (ORF) (Full)