Construct: ORF ccsbBroadEn_14854

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF018810.1_s300c1, BRDN0000458106
DNA Barcode:
None
Epitope Tag:
None
Notes:
Early stop codon detected

Originally Annotated References:

Gene:
AURKC (6795)

Vector Information:

Vector Backbone:
pDONR223
Pol II Cassette 1:
n/a
Pol II Cassette 2:
n/a
Selection Marker:
n/a
Visible Reporter:
n/a
Epitope Tag:
n/a

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 6795 AURKC aurora kinase C NM_001015878.2 99.6% 64% 159A>N;571_572insC;783A>N
2 human 6795 AURKC aurora kinase C NM_001015879.2 93.4% 57.6% (many diffs)
3 human 6795 AURKC aurora kinase C NM_003160.3 88.6% 53% (many diffs)
4 human 6795 AURKC aurora kinase C XR_430209.3 46.2% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
96
ORF end:
729
ORF length:
633
Sequence:
1TCGATTTATT TTGACTGATA GTGACCTGTT CGTTGCAACA AATTGATGAG CAATGCTTTT
61TTATAATGCC AACTTTGTAC AAAAAAGTTG GCACCATGAG CTCCCCCAGA GCTGTGGTGC
121AGCTGGGCAA AGCTCAACCT GCAGGCGAAG AGTTGGCTAC AGCAAACCAA ACAGCCCAGC
181AGCCCAGCAG CCCAGCCATG CGGCGCCTCA CAGTCGATGA CTTTGAAATC GGGCGTCCCC
241TGGGCAAGGG GAANTTTGGG AATGTGTACC TGGCTCGGCT CAAGGAAAGC CATTTCATTG
301TGGCCCTGAA GGTTCTCTTC AAGTCGCAGA TAGAGAAGGA AGGACTGGAG CACCAGCTGC
361GCCGGGAAAT TGAGATCCAG GCTCATCTAC AACACCCCAA TATCCTGCGC CTGTATAACT
421ATTTCCATGA TGCACGCCGG GTGTACCTGA TTCTGGAATA TGCTCCAAGG GGTGAGCTCT
481ACAAGGAGCT GCAGAAAAGC GAGAAATTAG ATGAACAGCG CACAGCCACG ATAATAGAGG
541AGTTGGCAGA TGCCCTGACC TACTGCCATG ACAAGAAAGT GATTCACAGA GATATTAAGC
601CAGAGAACCT GCTGCTGGGG TTCAGGGGTG AGGTGAAGAT TGCAGATTTT GGCTGGTCTG
661TGCACACCCC CCTCCCTGAG GAGGAAGACA ATGTGTGGGA CACTGGACTA CTTGCCGCCA
721GAAATGATTG AGGGGAGAAC ATATGATGAA AAGGTGGATT TGTGGTGCAT TGGAGTGCTC
781TGCTATGAGC TGCTGGTGGG ATATCCACCC TTTGAGAGCG CCTCCCACAG TGAGACTTAC
841AGACGCATCC TCAAGGTAGA TGTGAGGTTT CCACTATCNA TGCCTCTGGG GGCCCGGGAC
901TTGATTTCCA GGCTTCTCAG ATACCAGCCC TTGGAGAGAC TGCCCCTGGC CCAGATCCTG
961AAGCACCCCT GGGTTCAGGC CCACTCCCGA AGGGTGCTGC CTCCCTGTGC TCAGATGGCT
1021TCCTTGCCAA CTTTCTTGTA CAAAGTTGGC ATTATAAGAA AGCATTGCTT ATCAATTTGT
1081TGCAACGAAC AGGTCACTAT CAGTCAAAAT AAAATCATTA TTGCCATCCA GCGAGCTC

Download FASTA (ORF) (Full)

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