Construct: ORF ccsbBroadEn_15318

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF012137.1_s300c1, BRDN0000455583
DNA Barcode:
None
Epitope Tag:
None
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
KCTD21-AS1 (100289388)

Vector Information:

Vector Backbone:
pDONR223
Pol II Cassette 1:
n/a
Pol II Cassette 2:
n/a
Selection Marker:
n/a
Visible Reporter:
n/a
Epitope Tag:
n/a

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 100289388 KCTD21-AS1 KCTD21 antisense RNA 1 NR_102281.1 14.8% 1_400del;555_556ins490
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Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
711
ORF length:
645
Sequence:
1gttcgttgca acaaattgat gagcaatgct tttttataat gccaaCTTTG TACAAAAAAG
61TTGGCATGTG GGTGAGAAGA ATCGATGCAG AAGCCATCGC TCAGAGCGAT TTTCAGTACC
121TCTTCCACGA AGACCTGGAA GCTGTTGATC TGCTTGTTGG CGGGCACCAC CCAGAGCCTC
181TTGAGGTTCT GCTTGGTGTA CTCCTCCTCT GGCAGGCCCT CCACATTGGC CACCCAGTCC
241AGAGTCAGGT GGTTGGGGTC CTGCAAGTGG CTGGTGATGG AGGAGAGATT GCCATTGGAG
301CAGTAGAAGA GCTTAGAGCC AAGGAGCTTG AGGAAGAGGC AGGAGGTGCT GAAGATGTTG
361GCGTTGAAGA CCTCCATGCT GGAAGAGGAG AGGCTGTAGA TCTGGGGTGC CTCGCGCACA
421GTGAAGTGGA CCGTCTGCAC ACGCTGGTTC AGTGTGATGT TGAGCatggc attcttctcg
481gccttggaga gctccacttc cttctcctgc agggcctcaa tcaggggctg cacctggtag
541aagtcggcct ccctgcggag cagccccatc tcctggaagt cctcaggcag gtcaaggtgg
601gaggtccgca ggaagttgag gatatagcgg aacactttgc cgtcacggtc aatgaagcag
661ttgccctggc tgtccctctt ggtgggcatc ttcccgctga acatggcgcc tacccaactt
721tcttgtacaa agttggcatt ataagaaagc attgcttatc aatttgttgc aacgaac

Download FASTA (ORF) (Full)