Transcript: Mouse NM_001081137.1

Mus musculus sucrase isomaltase (alpha-glucosidase) (Sis), mRNA.

Source:
NCBI, updated 2017-06-25
Taxon:
Mus musculus (mouse)
Gene:
Sis (69983)
Length:
5887
CDS:
1..5457

Additional Resources:

NCBI RefSeq record:
NM_001081137.1
NBCI Gene record:
Sis (69983)

sgRNA constructs matching this transcript (CRISPRko, NGG PAM)

This list includes CRISPRko constructs with 100% (20mer + NGG) sequence match to the coding regions of this transcript.

No results found.

shRNA constructs matching this transcript with 100% SDR[?] match

This list includes all shRNAs that have a perfect SDR[?] match to Mouse NM_001081137.1, regardless of what transcript they were originally designed to target. For example, this list can include shRNAs that were originally designed to target: (i) a different isoform or obsolete version of this transcript (as annotated by NCBI), (ii) a transcript of an orthologous gene (in this collection, generally human-to-mouse or mouse-to-human), or (iii) a transcript of a different gene (from the same or different taxon).

Clone ID Target Seq Vector Match Position Match Region[?] SDR Match %[?] Intrinsic Score[?] Adjusted Score[?] Matches Other Mouse Gene?[?] Orig. Target Gene[?] Addgene[?]
1 TRCN0000269149 GGTGTACTCAAACCAATATTT pLKO_005 630 CDS 100% 15.000 21.000 N Sis n/a
2 TRCN0000269147 TATGGATTCCATCCGTATTAC pLKO_005 3412 CDS 100% 13.200 18.480 N Sis n/a
3 TRCN0000269148 TCGAACCACAATCCCTATTTG pLKO_005 2905 CDS 100% 13.200 10.560 N Sis n/a
4 TRCN0000428087 ACATCTTAGAGGAGGTTATAT pLKO_005 2337 CDS 100% 15.000 10.500 N SI n/a
5 TRCN0000269095 TCACACTCCTTATCTAATATT pLKO_005 5550 3UTR 100% 15.000 10.500 N Sis n/a
6 TRCN0000269097 GATCAACCTCCTGGATATAAA pLKO_005 3382 CDS 100% 15.000 9.000 N Sis n/a
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shRNA constructs with at least a near match to this transcript

This list includes shRNAs that have at least a >84% (16 of 19 bases) SDR[?] match to the transcript NM_001081137.1, regardless of what transcript they were originally designed to target. For example, this list can include shRNAs that were originally designed to target: (i) a different isoform or obsolete version of this transcript (as annotated by NCBI), (ii) a transcript of an orthologous gene (in this collection, generally human-to-mouse or mouse-to-human), or (iii) a transcript of a different gene (from the same or different taxon). NOTE: this download is a superset of the above result set.

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All ORF constructs matching this transcript

No results found.