Transcript: Mouse NM_145416.3

Mus musculus KRI1 homolog (Kri1), mRNA.

Source:
NCBI, updated 2015-12-30
Taxon:
Mus musculus (mouse)
Gene:
Kri1 (215194)
Length:
2625
CDS:
17..2134

Additional Resources:

NCBI RefSeq record:
NM_145416.3
NBCI Gene record:
Kri1 (215194)

sgRNA constructs matching this transcript (CRISPRko, NGG PAM)

This list includes CRISPRko constructs with 100% (20mer + NGG) sequence match to the coding regions of this transcript.

No results found.

shRNA constructs matching this transcript with 100% SDR[?] match

This list includes all shRNAs that have a perfect SDR[?] match to Mouse NM_145416.3, regardless of what transcript they were originally designed to target. For example, this list can include shRNAs that were originally designed to target: (i) a different isoform or obsolete version of this transcript (as annotated by NCBI), (ii) a transcript of an orthologous gene (in this collection, generally human-to-mouse or mouse-to-human), or (iii) a transcript of a different gene (from the same or different taxon).

Clone ID Target Seq Vector Match Position Match Region[?] SDR Match %[?] Intrinsic Score[?] Adjusted Score[?] Matches Other Mouse Gene?[?] Orig. Target Gene[?] Addgene[?]
1 TRCN0000241663 GGACTACCTTGAGTGGCTAAA pLKO_005 634 CDS 100% 10.800 15.120 N Kri1 n/a
2 TRCN0000241665 AGCGATGAGCATGTGGAATTT pLKO_005 170 CDS 100% 13.200 10.560 N Kri1 n/a
3 TRCN0000241664 ACAGTTCCTGAGGGATTATAT pLKO_005 745 CDS 100% 15.000 10.500 N Kri1 n/a
4 TRCN0000241666 GAAGAAGGACCCTCGAATTTA pLKO_005 238 CDS 100% 15.000 10.500 N Kri1 n/a
5 TRCN0000241667 GTCTGGACTACGAGGACATTA pLKO_005 1551 CDS 100% 13.200 9.240 N Kri1 n/a
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shRNA constructs with at least a near match to this transcript

This list includes shRNAs that have at least a >84% (16 of 19 bases) SDR[?] match to the transcript NM_145416.3, regardless of what transcript they were originally designed to target. For example, this list can include shRNAs that were originally designed to target: (i) a different isoform or obsolete version of this transcript (as annotated by NCBI), (ii) a transcript of an orthologous gene (in this collection, generally human-to-mouse or mouse-to-human), or (iii) a transcript of a different gene (from the same or different taxon). NOTE: this download is a superset of the above result set.

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All ORF constructs matching this transcript

No results found.