Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_99993
- Subject:
- promegaLuc.1
- Aligned Length:
- 1798
- Identities:
- 1381
- Gaps:
- 293
Alignment
Query 1 ATGGAAGACGCCAAAAACATAAAGAAAGGCCCGGCGCCATTCTATCCGCTGGAAGATGGAACCGCTGGAGAGCA 74
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1 ATGGAAGACGCCAAAAACATAAAGAAAGGCCCGGCGCCATTCTATCCGCTGGAAGATGGAACCGCTGGAGAGCA 74
Query 75 ACTGCATAAGGCTATGAAGAGATACGCCCTGGTTCCTGGAACAATTGCTTTTACAGATGCACATATCGAGGTGG 148
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 75 ACTGCATAAGGCTATGAAGAGATACGCCCTGGTTCCTGGAACAATTGCTTTTACAGATGCACATATCGAGGTGG 148
Query 149 ACATCACTTACGCTGAGTACTTCGAAATGTCCGTTCGGTTGGCAGAAGCTATGAAACGATATGGGCTGAATACA 222
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 149 ACATCACTTACGCTGAGTACTTCGAAATGTCCGTTCGGTTGGCAGAAGCTATGAAACGATATGGGCTGAATACA 222
Query 223 AATCACAGAATCGTCGTATGCAGTGAAAACTCTCTTCAATTCTTTATGCCGGTGTTGGGCGCGTTATTTATCGG 296
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 223 AATCACAGAATCGTCGTATGCAGTGAAAACTCTCTTCAATTCTTTATGCCGGTGTTGGGCGCGTTATTTATCGG 296
Query 297 AGTTGCAGTTGCGCCCGCGAACGACATTTATAATGAACGTGAATTGCTCAACAGTATGGGCATTTCGCAGCCTA 370
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 297 AGTTGCAGTTGCGCCCGCGAACGACATTTATAATGAACGTGAATTGCTCAACAGTATGGGCATTTCGCAGCCTA 370
Query 371 CCGTGGTGTTCGTTTCCAAAAAGGGGTTGCAAAAAATTTTGAACGTGCAAAAAAAGCTCCCAATCATCCAAAAA 444
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 CCGTGGTGTTCGTTTCCAAAAAGGGGTTGCAAAAAATTTTGAACGTGCAAAAAAAGCTCCCAATCATCCAAAAA 444
Query 445 ATTATTATCATGGATTCTAAAACGGATTACCAGGGATTTCAGTCGATGTACACGTTCGTCACATCTCATCTACC 518
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 ATTATTATCATGGATTCTAAAACGGATTACCAGGGATTTCAGTCGATGTACACGTTCGTCACATCTCATCTACC 518
Query 519 TCCCGGTTTTAATGAATACGATTTTGTGCCAGAGTCCTTCGATAGGGACAAGACAATTGCACTGATCATGAACT 592
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 TCCCGGTTTTAATGAATACGATTTTGTGCCAGAGTCCTTCGATAGGGACAAGACAATTGCACTGATCATGAACT 592
Query 593 CCTCTGGATCTACTGGTCTGCCTAAAGGTGTCGCTCTGCCTCATAGAACTGCCTGCGTGAGATTCTCGCATGCC 666
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 593 CCTCTGGATCTACTGGTCTGCCTAAAGGTGTCGCTCTGCCTCATAGAACTGCCTGCGTGAGATTCTCGCATGCC 666
Query 667 AGAGATCCTATTTTTGGCAATCAAATCATTCCGGATACTGCGATTTTAAGTGTTGTTCCATTCCATCACGGTTT 740
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 667 AGAGATCCTATTTTTGGCAATCAAATCATTCCGGATACTGCGATTTTAAGTGTTGTTCCATTCCATCACGGTTT 740
Query 741 TGGAATGTTTACTACACTCGGATATTTGATATGTGGATTTCGAGTCGTCTTAATGTATAGATTTGAAGAAGAGC 814
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 741 TGGAATGTTTACTACACTCGGATATTTGATATGTGGATTTCGAGTCGTCTTAATGTATAGATTTGAAGAAGAGC 814
Query 815 TGTTTCTGAGGAGCCTTCAGGATTACAAGATTCAAAGTGCGCTGCTGGTGCCAACCCTATTCTCCTTCTTCGCC 888
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 815 TGTTTCTGAGGAGCCTTCAGGATTACAAGATTCAAAGTGCGCTGCTGGTGCCAACCCTATTCTCCTTCTTCGCC 888
Query 889 AAAAGCACTCTGATTGACAAATACGATTTATCTAGTTTCCCCACAACG-GAGTGC-----GTGGCG-TCTGCAT 955
||||||||||||||||||||||||||||||||||.|||.| ||| .|.||| |||||| ||..|
Sbjct 889 AAAAGCACTCTGATTGACAAATACGATTTATCTAATTTAC-----ACGAAATTGCTTCTGGTGGCGCTCCCC-- 955
Query 956 TTAGTCAAGCTTGTCTCTTGATGTAATTCCCCTTGGAA---GTTCCCCCTATAGA-GTTGAATCT--------- 1016
||||| |.|.||.| |..|||| |||.|| .||| |||..||||
Sbjct 956 -------------TCTCT--AAGGAAGT---CGGGGAAGCGGTTGCC----AAGAGGTTCCATCTGCCAGGTAT 1007
Query 1017 ------------TGGGTCATTCTCA---AG----CATCA-----------TACAC-------TGGTTATAA--- 1050
|||| |||| || ||||| ||||| .|.|.||||
Sbjct 1008 CAGGCAAGGATATGGG-----CTCACTGAGACTACATCAGCTATTCTGATTACACCCGAGGGGGATGATAAACC 1076
Query 1051 ------GCTTGGTAA-----TCCCATTT---------CAGG-TGTCG-TGAGAATAGC-----ATCG------A 1091
|.|.||||| |.|||||| .||| |||.| |..|.|||.| |.|| .
Sbjct 1077 GGGCGCGGTCGGTAAAGTTGTTCCATTTTTTGAAGCGAAGGTTGTGGATCTGGATACCGGGAAAACGCTGGGCG 1150
Query 1092 TTGATCAACA---------TGTTTGT------TCATAAAAGTTGGCATGGCC----------CCAAGCAAGAGG 1140
||.||||| | |||.||| ||.||..|.| |||.|| .|||.|..||
Sbjct 1151 TTAATCAA-AGAGGCGAACTGTGTGTGAGAGGTCCTATGATT----ATGTCCGGTTATGTAAACAATCCGGA-- 1217
Query 1141 AGCCACCAAGGCTTCGGCTTCGTCTTCTGCTTCATGCACAGTGAT--ATCACGG--ACATCAACCTCCGG-GAC 1209
|||.|||||.|| |||.||..|||..||| || || |||| ||.|| |||
Sbjct 1218 AGCGACCAACGC-----------------CTTGATTGACAAGGATGGAT---GGCTACAT-----TCTGGAGAC 1266
Query 1210 A-ACCT--CCGTGA-GCAG-----------TTCATGGAGTTCTCCAGCCCCA--TCTC-GA--ACG--CAGAGG 1261
| |.|| |.|.|| |.|| ||||| .|||..|| |||..| |||| || |.| ||.||
Sbjct 1267 ATAGCTTACTGGGACGAAGACGAACACTTCTTCAT--CGTTGACC-GCCTGAAGTCTCTGATTAAGTACAAAG- 1336
Query 1262 AGCTCAACATCATGCTAGGCTGAGTCGGTGGTGGCTCCCGNTGAATTGGANNNCATTGACAAAGGCCGAGAGGC 1335
||| |||| |||||||||||.|||||||||...||
Sbjct 1337 -GCT----ATCA-----------------GGTGGCTCCCGCTGAATTGGAATCCA------------------- 1369
Query 1336 TNTTGNTNNNACNNCCCAACATCTTCNANGNAGNNNTNGCAGNTNTNCNNNANNANGANGNNGGTGNNCTNNCN 1409
|.|||.|...||..||||||||||||.|.|.||...|.||||.|.|.|...|..|.||.|..||||..||..|.
Sbjct 1370 TCTTGCTCCAACACCCCAACATCTTCGACGCAGGTGTCGCAGGTCTTCCCGACGATGACGCCGGTGAACTTCCC 1443
Query 1410 GNCNCCTCTGGCCACATCTCAGGGTTNNTGGCATGGGGTGGCTNTTGGNGCNNGGAAAGACGATGNCGGNNNAA 1483
|.|.|| |||..|| |.||||.||..||||||||||||.|||...||
Sbjct 1444 GCCGCC-----------------GTTGTTG------------TTTTGGAGCACGGAAAGACGATGACGGAAAAA 1488
Query 1484 GNNNTCAGTCTGATGTNNATTACNTCGCCAGNCNNGTNNCAACCGCGAAAAAGTTGCGCGGAGGAGTNGTGTTN 1557
|...|| ||..|||||.|||||||.|..||..||||||||||||||||||||||||||||.|||||.
Sbjct 1489 GAGATC--------GTGGATTACGTCGCCAGTCAAGTAACAACCGCGAAAAAGTTGCGCGGAGGAGTTGTGTTT 1554
Query 1558 GNGGACGAAGTACCGAAAGGTCTTACCGGAAAACTCGACGCAANAANAATCAGAGAGATCCTCATAAAGGCCAA 1631
|.|||||||||||||||||||||||||||||||||||||||||.||.|||||||||||||||||||||||||||
Sbjct 1555 GTGGACGAAGTACCGAAAGGTCTTACCGGAAAACTCGACGCAAGAAAAATCAGAGAGATCCTCATAAAGGCCAA 1628
Query 1632 GAAGGGCGGAAAGATCGCCGNN 1653
||||||||||||||||||||..
Sbjct 1629 GAAGGGCGGAAAGATCGCCGTG 1650
