Construct: shRNA TRCN0000231747

Construct Description:

Construct Type:
shRNA
Other Identifiers:
clonetechGfp_436s21c1
DNA Barcode:
TACAACAGCCACAACGTCTAT

Original Target:

Taxon:
Control
Gene:
GFP (GFP)
Gene Description:
clonetechGfp
Transcript:
Broad clonetechGfp.1 (CURRENT)
Match location:
Position 436 (CDS)

Vector Information:

Vector Backbone:
pLKO_TRC005
Pol II Cassette 1:
PGK-PuroR
Pol II Cassette 2:
n/a
Pol III Promoter:
constitutive hU6
Pol III Insert:
(TRCN0000231747)
Selection Marker:
PuroR
Visible Reporter:
n/a

Current transcripts matched by this shRNA:

Sequence Information

Target Sequence:
TACAACAGCCACAACGTCTAT
Hairpin Sequence:
5'-CCGG-TACAACAGCCACAACGTCTAT-CTCGAG-ATAGACGTTGTGGCTGTTGTA-TTTTTG-3'

Oligo design for arrayed cloning:

Forward sequence:
5'-CCGGTACAACAGCCACAACGTCTATCTCGAGATAGACGTTGTGGCTGTTGTATTTTTG-3'
Reverse sequence:
5'-AATTCAAAAATACAACAGCCACAACGTCTATCTCGAGATAGACGTTGTGGCTGTTGTA-3'

Other clones with same target sequence:

  1. TRCN0000072185