Nucleotide Global Alignment

Description

Query:
TRCN0000465237
Subject:
XR_001756516.1
Aligned Length:
2999
Identities:
1100
Gaps:
1725

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  ACACCCTGTGTGTCTCTCTGTCCTGCCAGCACTGAGGGCTCATCCCTCTGCAGAGCGCCGGGTCACCGGGAGGA  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  GACGCCATGACGCCCGCCCTCACAGCCCTGCTCTGCCTTGGGCTGAGTCTGGGCCCCAGGACCCGCGTGCAGGC  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  AGGGCCCTTCCCCAAACCCACCCTCTGGGCTGAGCCAGGCTCTGTGATCAGCTGGGGGAGCCCCGTGACCATCT  222

Query    1  -------------------------------------------------ATGTCGA-------GGCACATATTA  18
                                                             |.|.|.|       ||.|||.|  |
Sbjct  223  GGTGTCAGGGGAGCCTGGAGGCCCAGGAGTACCAACTGGATAAAGAGGGAAGCCCAGAGCCCTGGGACAGA--A  294

Query   19  AAAA--CACTGGAGTCTGAAAACAAGGTCAAACTCTCCATCCCATCCATGATGTGGGAACATGCAGGGCGATAT  90
            |.||  |||||||..|..|.|||||||.||.|.||||||||||||||||||....|.|.|||||||||.||||.
Sbjct  295  ATAACCCACTGGAACCCAAGAACAAGGCCAGATTCTCCATCCCATCCATGACACAGCACCATGCAGGGAGATAC  368

Query   91  CACTGTTACTATCAGAGCCCTGCAGGCTGGTCAGAGCCCAGCGACCCCCTGGAGCTGGTGGTGACAG---CCTA  161
            |.|||..|||||.|.|||.|||||||||||||||||||||||||||||||||||||||||.||||||   .|||
Sbjct  369  CGCTGCCACTATTACAGCTCTGCAGGCTGGTCAGAGCCCAGCGACCCCCTGGAGCTGGTGATGACAGGATTCTA  442

Query  162  CAGCAGACCCACCCTGTCCGCCCTGCCAAGCCCTGTGGTAACCTCAGGAGTGAACGTGACCCTCCGGTGTGCCT  235
            ||.||.|||||||||.||.||||||||.|||||||||||..|||||||.|.|||..||||||||||.||||.||
Sbjct  443  CAACAAACCCACCCTCTCAGCCCTGCCCAGCCCTGTGGTGGCCTCAGGGGGGAATATGACCCTCCGATGTGGCT  516

Query  236  CACGGCTGGGACTGGGCAGGT-TCAC--------TCTGATTGAGGAAGGAGACCACAGGCTCTCCTGGACCCTG  300
            |||.|..||||         | ||||        ||||||..||||||||||.|||..||||.||.||||||||
Sbjct  517  CACAGAAGGGA---------TATCACCATTTTGTTCTGATGAAGGAAGGAGAACACCAGCTCCCCCGGACCCTG  581

Query  301  AACTCACACCAACACAACCATGGAAAGTTCCAGGCCCTGTTCCCCATGGGCCCCCTGACCTTCAGCAACAGGGG  374
            .|||||||.||.|.|.||..|||...||||||||||||||||||..||||||||.|||||..||||.|||||.|
Sbjct  582  GACTCACAGCAGCTCCACAGTGGGGGGTTCCAGGCCCTGTTCCCTGTGGGCCCCGTGACCCCCAGCCACAGGTG  655

Query  375  TACATTCAGATGCTACGGCTATGAAAACAACACCCCATACGTGTGGTCGGAACCCAGTGACCCCCTGCAGCTAC  448
            .|..||||.||||||...||||.|.|..||||||||.|..||||||||..|.|||||||||||||||.||.|.|
Sbjct  656  GAGGTTCACATGCTATTACTATTATACAAACACCCCCTGGGTGTGGTCCCACCCCAGTGACCCCCTGGAGATTC  729

Query  449  TGGTGTCAGGCGTGTCTAGGAAGCCCTCCCTCCTGACCCTGCAGGGCCCTGTCGTGACCCCCGGAGAGAATCTG  522
            ||...||||||||||||||||||||||||||||||||||||||||||||||||.||.||||.||..|||..|||
Sbjct  730  TGCCCTCAGGCGTGTCTAGGAAGCCCTCCCTCCTGACCCTGCAGGGCCCTGTCCTGGCCCCTGGGCAGAGCCTG  803

Query  523  ACCCTCCAGTGTGGCTCTGATGTCGGCTACATCAGATACACTCTGTACAAGGAGGGGG-CCGATGGCCTCCCCC  595
            ||||||||||||||||||||||||||||||..|||||....||||||.|||||||||| .|| ||.|.|||.||
Sbjct  804  ACCCTCCAGTGTGGCTCTGATGTCGGCTACGACAGATTTGTTCTGTATAAGGAGGGGGAACG-TGACTTCCTCC  876

Query  596  AGCGCCCTGGCCGGCAGCCCCAGGCTGGGCTCTCCCAGGCCAACTTCACCCTGAGCCCTGTGAGCCGCTCCTAC  669
            ||||||||||||.||||||||||||||||||||||||||||||||||||||||.||||||||||||.||||.||
Sbjct  877  AGCGCCCTGGCCAGCAGCCCCAGGCTGGGCTCTCCCAGGCCAACTTCACCCTGGGCCCTGTGAGCCCCTCCCAC  950

Query  670  GGGGGCCAGTACAGATGCTACGGCGCACACAACGTCTCCTCCGAGTGGTCGGCCCCCAGTGACCCCCTGGACAT  743
            ||||||||||||||.|||||.||.|||||||||.|||||||||||||||||||||||||.|||||||||.||||
Sbjct  951  GGGGGCCAGTACAGGTGCTATGGTGCACACAACCTCTCCTCCGAGTGGTCGGCCCCCAGCGACCCCCTGAACAT  1024

Query  744  CCTGATCGCAGGACAGATCTCTGACAGACC--CTCCCTCTCAGTGCAGCCGGGCCCCACGGTGACCTCAGGAGA  815
            ||||||.|||||||||||||.||||  |||  ||||||.||||..||||||||||||||.|||.||||||||||
Sbjct 1025  CCTGATGGCAGGACAGATCTATGAC--ACCGTCTCCCTGTCAGCACAGCCGGGCCCCACAGTGGCCTCAGGAGA  1096

Query  816  GAAGGTGACCCTGCTGTGTCAGTCATGGGACCCGATGTT-------CACTTTCCTTCTGACCAAGGAGGGGGCA  882
            |||.|||||||||||||||||||||.|||       |||       ||||||||||||||||||.||.||||||
Sbjct 1097  GAACGTGACCCTGCTGTGTCAGTCACGGG-------GTTATTTTGACACTTTCCTTCTGACCAAAGAAGGGGCA  1163

Query  883  GCCCATCCCCCGTTGCGTCTGAGATCAATGTACGGAGCTCATAAGTACCAGGCTGAATTCCCCATGAGTCCTGT  956
            |||||||||||..|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1164  GCCCATCCCCCACTGCGTCTGAGATCAATGTACGGAGCTCATAAGTACCAGGCTGAATTCCCCATGAGTCCTGT  1237

Query  957  GACCTCAGCCCACGCGGGGACCTACAGGTGCTACGGCTCACGCAGCTCCAACCCCTACCTGCTGTCTCACCCCA  1030
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||.||||||||||||||||||
Sbjct 1238  GACCTCAGCCCACGCGGGGACCTACAGGTGCTACGGCTCACGCAGCTCCAACCCCCACCTGCTGTCTCACCCCA  1311

Query 1031  GTGAGCCCCTGGAGCTCGTGGTCTCAGGAGCAACTGAGACCCTCAA---TCCAGCACAAAAGAAGTCAGATTCC  1101
            |||||||||||||||||.|||||||||||.|..||| ||..|||.|   |||..|.||.|.|  |.|....|||
Sbjct 1312  GTGAGCCCCTGGAGCTCATGGTCTCAGGACCCTCTG-GAGGCTCCAGCCTCCCACCCACAGG--GCCGCCCTCC  1382

Query 1102  AAGACTGCCCCACACCTCCAGGATTACACAGTGGAGAATCTCATCCGCATGGGTGTGGCTGGCTTGGTCCTGCT  1175
            |...|||||.|||||..|.||||||||||||||||||||||||||||||||||..||||.||||||||||||.|
Sbjct 1383  ACACCTGCCTCACACGCCAAGGATTACACAGTGGAGAATCTCATCCGCATGGGCATGGCAGGCTTGGTCCTGGT  1456

Query 1176  GTTCCTCGGGATTCTGTTATTTGAGGCTCAGCACAGCCAGAGAAGCCCCCCAAGGTGCAGCCAGGAGGCAAACA  1249
            |||||||||||||||||||||||||||||||||||||||||||| .||||||||.|||||||.|||||..||||
Sbjct 1457  GTTCCTCGGGATTCTGTTATTTGAGGCTCAGCACAGCCAGAGAA-ACCCCCAAGATGCAGCCGGGAGGTGAACA  1529

Query 1250  GCAGAAAGGACAATGCACCCTTCAGAGTGGTGGAGCCTTGGGAACAGATC------------------------  1299
            ||.||.|||||||||||||||||||.||||||||||||..||.|||||||                        
Sbjct 1530  GCGGAGAGGACAATGCACCCTTCAGCGTGGTGGAGCCTCAGGGACAGATCTGATGATCCCAGAAGGCTCTGGAG  1603

Query 1300  --------------------------------------------------------------------------  1299
                                                                                      
Sbjct 1604  GACAATCTAGGACCTCCAGAGGGGGGTGAGATTTCAGGCCACACACTGTGGAAGGTAATCATGTCTGATCACAA  1677

Query 1300  --------------------------------------------------------------------------  1299
                                                                                      
Sbjct 1678  ATTTTGGGTCTCCACCTTACTTCCAATCTATGTTGTGAATGCCCAGTTGAGACCCACGGAAAAGAGCTCATGGC  1751

Query 1300  --------------------------------------------------------------------------  1299
                                                                                      
Sbjct 1752  TTGTATGGCAGTCTCCCACCCTCATGTGTTCAATCTGATGATCCCAGGAGGTTCTGGAACAAAATCTACAGCCT  1825

Query 1300  --------------------------------------------------------------------------  1299
                                                                                      
Sbjct 1826  ATGCTTTCTGGACTATCTGTCGATCATTCCTGAAGAGAGGGATCAATGTTGAGGTATTCATTTCACATGATGAA  1899

Query 1300  --------------------------------------------------------------------------  1299
                                                                                      
Sbjct 1900  AATGACAATATCAAATGTCAGAGGTAGTAGGGCTCACGTAGAAATCCAATACATCCATGGTAGGACTGCAAATT  1973

Query 1300  --------------------------------------------------------------------------  1299
                                                                                      
Sbjct 1974  ACTTGAATCAATTTGGGGAAAATATCAGAAGTACCCAGTGAAAAAGAAGAAACATGGCCGGGCGCGGTGGCTCA  2047

Query 1300  --------------------------------------------------------------------------  1299
                                                                                      
Sbjct 2048  TGCCTGTAATCCCAGCACTTTGGGAGGCTGAGGCGGGCGGACACGAGTTCAGGAATTCGAGTCCAGCTTGGCCA  2121

Query 1300  --------------------------------------------------------------------------  1299
                                                                                      
Sbjct 2122  ACATAGTGAAACCCCGTCTCTACTAAAAATACAAAACATTAGCTGGGCGTGGTGGCAGGTGCCTGTAATTTCAG  2195

Query 1300  --------------------------------------------------------------------------  1299
                                                                                      
Sbjct 2196  CTACTCAGGAGGCTGAGGCAGGAGAATTGCTTGAACCTGGGAGACGGAAGCAAGTTGGCGCCAGTTGGTGCAGT  2269

Query 1300  --------------------------------------------------------------------------  1299
                                                                                      
Sbjct 2270  GAGCCAAGATGGCATTGCACTCTGGCCCAGGTGACAGTACGAGACTTCATCTAAAAAAAAAAGAAAAAAAAAAA  2343

Query 1300  --------------------------------------------------------------------------  1299
                                                                                      
Sbjct 2344  GAAGAGACACACAGCTATGAACACAGAGCACAGAACCTAGAGGAAAATGTGTTCATATGGTGAGGTTTCATTCA  2417

Query 1300  --------------------------------------------------------------------------  1299
                                                                                      
Sbjct 2418  CAACAACATGGACAGGACTGCTGCTCATATTACACAACAGCCATAAAACCCAAAAATACATCTAAAACAAAGGA  2491

Query 1300  --------------------------------------------------------------------------  1299
                                                                                      
Sbjct 2492  AACATATGTGGTTCAATTCCACCAAGGGATACTATGGGGCCGTGCAGAGGCACAGACAAAATCTACAAAGAGCA  2565

Query 1300  --------------------------------------------------------------------------  1299
                                                                                      
Sbjct 2566  ATGCAAACCAACCTTCCATCATGATGTTGAGTAAAGAAACAAGAGTATAAAAAGAAGGTGTGCACATGAAGCTC  2639

Query 1300  --------------------------------------------------------------------------  1299
                                                                                      
Sbjct 2640  AAAAAGAGGCAGCATTTATTTTCTAGGGAGGCAAACTCAAAATAGACCCCATAAATAAAGGAAATAGATTATGT  2713

Query 1300  --------------------------------------------------------------------------  1299
                                                                                      
Sbjct 2714  AATCCAAAATAGTGCTTGCACATCAGGAAATACTGGAGGGTTCTGTTCAACATGGAAACTCCAAGGACCACTGG  2787

Query 1300  --------------------------------------------------------------------------  1299
                                                                                      
Sbjct 2788  ACGCGGGCACTGGAATGCTGACTTTGATTTGGTGACCCTCAATCCACTTCGAGTTATTGGTAAATCACATAATT  2861

Query 1300  --------------------------------------------------------------------------  1299
                                                                                      
Sbjct 2862  TTAATTTGATACGGAATAATCATACATGTTTCTTGGGAGCATGTGGTAATCTGATTCATCCATGCAATGTGTAA  2935

Query 1300  ---------------------------------------  1299
                                                   
Sbjct 2936  CGATCCAATAAAGGTTCCCAGGACATTCATCACCCTGAA  2974

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