Nucleotide Global Alignment
Description
- Query:
- TRCN0000465313
- Subject:
- XM_006720692.3
- Aligned Length:
- 3062
- Identities:
- 1459
- Gaps:
- 1600
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGGTTTCCCATTTCATGGGGTCTCTCAGTGTCCTGTGTTTCCTTCTGCTGCTTGGATTCCAGTTCGTCTGCCC 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 ACAGCCCTCCACTCAACACAGGAAGGTCCCGCAGCGGATGGCGGCGGAGGGCGCCCCCGAGGACGACGGCGGCG 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 GCGGCGCCCCGGGAGTGTGGGGCGCCTGGGGCCCCTGGTCGGCCTGCTCGCGTAGCTGCAGCGGCGGCGTGATG 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 GAGCAGACGCGGCCCTGCCTGCCCCGCTCCTACCGCCTGCGCGGCGGCCAGCGGCCTGGCGCCCCTGCGCGCGC 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 CTTCGCGGACCACGTGGTGTCGGCGGTGCGCACGTCGGTGCCACTGCACCGGAGCCGCGACGAGACGCCAGCGC 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 TGGCCGGTACGGACGCCAGCCGCCAGGGCCCCACGGTGCTGCGAGGCAGCCGGCACCCACAGCCCCAGGGCCTC 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 GAAGTCACTGGGGACAGAAGGAGCAGGACCCGTGGTACCATTGGCCCTGGCAAGTATGGCTATGGTAAGGCCCC 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 ATATATCTTACCACTGCAGACAGACACTGCACACACGCCACAGAGGCTCCGGAGACAGAAGCTCTCATCCCGCC 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 ATTCCAGGTCCCAGGGAGCATCTTCTGCTAGGCATGGCTACAGTTCACCAGCCCACCAGGTCCCCCAACATGGG 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 CCTTTGTACCAAAGTGACAGTGGCCCTCGCTCTGGACTGCAGGCTGCGGAGGCCCCCATCTACCAGCTACCTTT 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 GACCCATGATCAAGGCTACCCTGCAGCTTCAAGTCTCTTTCACAGCCCAGAAACAAGCAACAACCACGGTGTGG 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 GGACCCATGGGGCAACTCAGAGCTTCTCTCAGCCTGCCCGATCTACAGCAATCTCATGCATCGGGGCCTATCGG 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 CAGTACAAGCTGTGCAACACCAACGTATGTCCAGAAAGCAGTAGAAGTATCCGGGAGGTACAGTGTGCATCCTA 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 CAACAACAAGCCATTCATGGGCCGGTTTTATGAGTGGGAACCATTTGCAGAAGTAAAAGGCAATCGCAAATGTG 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 AGTTGAACTGCCAGGCAATGGGCTACCGCTTCTATGTACGGCAAGCTGAGAAAGTCATCGATGGCACCCCCTGT 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 GACCAGAACGGCACGGCCATCTGTGTGTCTGGGCAGTGCAAGAGCATTGGCTGTGATGACTACTTAGGCTCCGA 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 CAAAGTCGTGGACAAATGTGGGGTGTGTGGAGGAGACAACACGGGCTGTCAGGTTGTGTCGGGCGTGTTTAAGC 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 ATGCCCTCACCAGCCTGGGCTACCACCGCGTCGTGGAGATTCCCGAGGGAGCCACGAAAATCAACATCACGGAG 1332
Query 1 ATGTACAAGAGCAACAACTATTTGGCCCTGAGAAGTCGTTCTGGACGCTCCATCATCAATGGGAACTGGGCAAT 74
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1333 ATGTACAAGAGCAACAACTATTTGGCCCTGAGAAGTCGTTCTGGACGCTCCATCATCAATGGGAACTGGGCAAT 1406
Query 75 TGATCGACCAGGAAAATACGAGGGCGGAGGGACCATGTTCACCTACAAGCGTCCAAATGAGATTTCGAGCACTG 148
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1407 TGATCGACCAGGAAAATACGAGGGCGGAGGGACCATGTTCACCTACAAGCGTCCAAATGAGATTTCGAGCACTG 1480
Query 149 CCGGAGAGTCCTTTTTGGCGGAAGGTCCCACCAACGAGATCTTGGATGTCTACATGATACACCAGCAGCCAAAC 222
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1481 CCGGAGAGTCCTTTTTGGCGGAAGGTCCCACCAACGAGATCTTGGATGTCTACATGATACACCAGCAGCCAAAC 1554
Query 223 CCAGGCGTGCACTACGAGTACGTGATCATGGGGACCAACGCCATCAGCCCCCAGGTGCCACCCCACAGGAGACC 296
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1555 CCAGGCGTGCACTACGAGTACGTGATCATGGGGACCAACGCCATCAGCCCCCAGGTGCCACCCCACAGGAGACC 1628
Query 297 AGGGGAACCCTTCAATGGCCAGATGGTGACAGAAGGCAGGAGCCAGGAGGAGGGAGAACAGAAAGGGAGGAACG 370
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1629 AGGGGAACCCTTCAATGGCCAGATGGTGACAGAAGGCAGGAGCCAGGAGGAGGGAGAACAGAAAGGGAGGAACG 1702
Query 371 AGGAGAAGGAAGACTTGCGTGGGGAGGCCCCTGAGATGTTCACCTCAGAATCGGCACAGACCTTCCCAGTCAGG 444
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1703 AGGAGAAGGAAGACTTGCGTGGGGAGGCCCCTGAGATGTTCACCTCAGAATCGGCACAGACCTTCCCAGTCAGG 1776
Query 445 CATCCAGACAGATTTTCTCCCCATCGACCGGACAACTTGGTGCCACCAGCACCGCAGCCCCCACGGCGCAGCCG 518
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1777 CATCCAGACAGATTTTCTCCCCATCGACCGGACAACTTGGTGCCACCAGCACCGCAGCCCCCACGGCGCAGCCG 1850
Query 519 GGATCACAACTGGAAGCAGCTTGGGACAACAGAATGTTCCACGACCTGTGGGAAAGGATCGCAGTACCCTATTT 592
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1851 GGATCACAACTGGAAGCAGCTTGGGACAACAGAATGTTCCACGACCTGTGGGAAAGGATCGCAGTACCCTATTT 1924
Query 593 TCCGCTGTGTGCACAGAAGCACTCATGAAGAGGCTCCTGAGAGTTACTGTGACTCCAGCATGAAGCCGACCCCC 666
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1925 TCCGCTGTGTGCACAGAAGCACTCATGAAGAGGCTCCTGAGAGTTACTGTGACTCCAGCATGAAGCCGACCCCC 1998
Query 667 GAGGAGGAGCCCTGCAACATCTTCCCTTGCCCAGCCTTCTGGGACATCGGGGAGTGGTCTGAGTGCAGCAAGAC 740
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1999 GAGGAGGAGCCCTGCAACATCTTCCCTTGCCCAGCCTTCTGGGACATCGGGGAGTGGTCTGAGTGCAGCAAGAC 2072
Query 741 CTGTGGCCTGGGCATGCAGCACCGCCAGGTTCTGTGCCGCCAGGTGTACGCCAACCGCAGCCTGACGGTGCAGC 814
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2073 CTGTGGCCTGGGCATGCAGCACCGCCAGGTTCTGTGCCGCCAGGTGTACGCCAACCGCAGCCTGACGGTGCAGC 2146
Query 815 CCTACCGCTGCCAGCACCTGGAGAAACCTGAGACCACCAGCACCTGCCAACTCAAGATCTGCAGCGAGTGGCAG 888
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2147 CCTACCGCTGCCAGCACCTGGAGAAACCTGAGACCACCAGCACCTGCCAACTCAAGATCTGCAGCGAGTGGCAG 2220
Query 889 ATCCGGACCGACTGGACCTCGTGCTCGGTGCCCTGCGGCGTGGGACAGAGGACCCGTGATGTGAAGTGTGTGAG 962
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2221 ATCCGGACCGACTGGACCTCGTGCTCGGTGCCCTGCGGCGTGGGACAGAGGACCCGTGATGTGAAGTGTGTGAG 2294
Query 963 CAACATTGGGGATGTGGTTGACGATGAGGAATGCAACATGAAGCTCCGGCCGAATGACATTGAGAACTGCGACA 1036
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2295 CAACATTGGGGATGTGGTTGACGATGAGGAATGCAACATGAAGCTCCGGCCGAATGACATTGAGAACTGCGACA 2368
Query 1037 TGGGACCCTGTGCCAAGAGCTGGTTCCTCACCGAGTGGAGCGAAAGGTGCTCAGCGGAGTGTGGGGCCGGAGTG 1110
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2369 TGGGACCCTGTGCCAAGAGCTGGTTCCTCACCGAGTGGAGCGAAAGGTGCTCAGCGGAGTGTGGGGCCGGAGTG 2442
Query 1111 CGGACACGCTCGGTGGTGTGCATGACCAACCATGTCAGCAGCCTGCCCCTGGAGGGCTGTGGGAACAACCGGCC 1184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2443 CGGACACGCTCGGTGGTGTGCATGACCAACCATGTCAGCAGCCTGCCCCTGGAGGGCTGTGGGAACAACCGGCC 2516
Query 1185 GGCAGAGGCCACCCCATGTGACAACGGACCCTGCACGGGCAAGGTGGAGTGGTTTGCCGGGAGCTGGAGTCAGT 1258
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2517 GGCAGAGGCCACCCCATGTGACAACGGACCCTGCACGGGCAAGGTGGAGTGGTTTGCCGGGAGCTGGAGTCAGT 2590
Query 1259 GTTCCATCGAGTGTGGGAGCGGGACGCAACAGAGGGAGGTGATTTGTGTTAGAAAGAATGCAGACACCTTTGAA 1332
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2591 GTTCCATCGAGTGTGGGAGCGGGACGCAACAGAGGGAGGTGATTTGTGTTAGAAAGAATGCAGACACCTTTGAA 2664
Query 1333 GTGTTGGACCCCTCTGAATGTTCTTTCCTGGAGAAACCCCCCAGCCAGCAATCCTGCCACCTCAAGCCTTGCGG 1406
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2665 GTGTTGGACCCCTCTGAATGTTCTTTCCTGGAGAAACCCCCCAGCCAGCAATCCTGCCACCTCAAGCCTTGCGG 2738
Query 1407 AGCCAAATGGTTTAGCACCGAATGGAGCATGAGTCTACAAAGAGCCATGCTCACCAGG-------------CC- 1466
|||||||||||||||||||||||||||||| ||.|.|.|||||| || ||||| ||
Sbjct 2739 AGCCAAATGGTTTAGCACCGAATGGAGCAT--GTGTTCCAAGAGC--TG----CCAGGGTGGCTTTCGGGTCCG 2804
Query 1467 --AAGT-------------------------------------------------------------------- 1470
||||
Sbjct 2805 GGAAGTGCGGTGTCTGTCTGATGACATGACTCTAAGTAACCTCTGTGACCCTCAGTTGAAACCAGAAGAGAGAG 2878
Query 1471 -------------------------------------------------------------------------- 1470
Sbjct 2879 AATCTTGTAACCCTCAGGACTGTGTCCCTGAAGTTGATGAAAACTGCAAGGACAAGTACTACAACTGCAACGTG 2952
Query 1471 -------------------------------------------------------------------------- 1470
Sbjct 2953 GTGGTCCAGGCAAGACTCTGTGTCTACAACTACTACAAGACCGCCTGCTGTGCCTCCTGCACCCGTGTGGCCAA 3026
Query 1471 ---------------------------- 1470
Sbjct 3027 CAGGCAGACGGGCTTCCTGGGGAGCAGA 3054
