Nucleotide Global Alignment

Description

Query:
TRCN0000465338
Subject:
NM_001201341.1
Aligned Length:
987
Identities:
427
Gaps:
516

Alignment

Query   1  ATGGANGCAAATGGGAGCCAAGGCACCTCGGGCAGCGCCAACGACTCCCAGCACGACCCCGGTAAAATGTTTAT  74
           |||||.|||||||||||||.||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct   1  ATGGAGGCAAATGGGAGCCCAGGCACCTCGGGCAGCGCCAACGACTCCCAGCACGACCCCGGTAAAATGTTTAT  74

Query  75  CGGTGGACTGAGCTGGCAGACCTCACCAGATAGCCTTAGAGACTATTTTAGCAAATTTGGAGAAATTAGAGAAT  148
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  75  CGGTGGACTGAGCTGGCAGACCTCACCAGATAGCCTTAGAGACTATTTTAGCAAATTTGGAGAAATTAGAGAAT  148

Query 149  GTATGGTCATGAGAGATCCCACTACGAAACGCTCCAGAGGCTTCGGTTTCGTCACGTTCGCAGACCCAGCAAGT  222
           ||||||||||||||||||||||.||||||||||||||||||||||||||||||||.||||||||||||||||||
Sbjct 149  GTATGGTCATGAGAGATCCCACAACGAAACGCTCCAGAGGCTTCGGTTTCGTCACCTTCGCAGACCCAGCAAGT  222

Query 223  GTAGATAAAGTATTAGGTCAGCCCCACCATGAGTTAGATTCCAAGACGATTGACCCCAAAGTTGCATTTCCTCG  296
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||.|||||||||||||||||
Sbjct 223  GTAGATAAAGTATTAGGTCAGCCCCACCATGAGTTAGATTCCAAGACGATTGACCCAAAAGTTGCATTTCCTCG  296

Query 297  TCGAGCGCAACCCAAGATGGTCACGAGAACAAAGAAAATATTTGTAGGCGGGTTATCTGCGAACACAGTAGTGG  370
           ||||||||||||.||||  ||||.|||.|             .|.||||                   |..|||
Sbjct 297  TCGAGCGCAACCTAAGA--GTCAAGAGCA-------------GGGAGGC-------------------TCCTGG  336

Query 371  AAGATGTAAAGCAATATTTCGAGCAGTTTGG--CAAGGTGGAAGATGCAATGCTGATGTTTGATAAAACTACCA  442
           |      ||.|||          ||   |||  ||.|||                                |||
Sbjct 337  A------AACGCA----------CA---TGGACCACGGT--------------------------------CCA  359

Query 443  ACAGGCACAGAGGGTTTGGCTTTGTCACTTTTGAGAATGAAGATGTTGTGGAGAAAGTCTGTGAGATTCATTTC  516
           |           |.|..||||...|||                      ||.||                   |
Sbjct 360  A-----------GCTCGGGCTGCCTCA----------------------GGTGA-------------------C  381

Query 517  CATGAAATCAATAATAAAATGGTAGAATGTAAGAAAGCTCAGCCGAAAGAAGTCATGTTCCCACCTGGGACAAG  590
           || ||          ||||.|.|.|..|||.|||   |||.||       .|.|.|.|||||            
Sbjct 382  CA-GA----------AAAAGGTTGGCTTGTCAGA---CTCTGC-------TGCCCTCTTCCC------------  422

Query 591  AGGCCGGGCCCGGGGACTGCCTTACACCATGGAC-GCGTTCATGCTTGGCATGGGGATGCTGGGATATCCCAAC  663
            |||....||||     |.|||           | |||     ||.||||| |..||.|||             
Sbjct 423  -GGCTCTCCCCG-----TCCCT-----------CTGCG-----GCCTGGCA-GACGAGGCT-------------  460

Query 664  TTCGTGGCGACCTATGGCCGTGGCTACCCCGGATTTGCTCCAAGCTATGGCTATCAGTTCCCAGGCTTCCCAGC  737
           ||.|.||        ||||||.                                                    
Sbjct 461  TTAGAGG--------GGCCGTC----------------------------------------------------  474

Query 738  AGCGGCTTATGGACCAGTGGCAGCAGCGGCGGTGGCGGCAGCAAGAGGATCAGGCTCCAACCCGGCGCGGCCCG  811
                                                                                     
Sbjct 475  --------------------------------------------------------------------------  474

Query 812  GAGGCTTCCCGGGGGCCAACAGCCCAGGACCTGTCGCCGATCTCTACGGCCCTGCCAGCCAGGACTCCGGAGTG  885
                                                                                     
Sbjct 475  --------------------------------------------------------------------------  474

Query 886  GGGAATTACATAAGTGCGGCCAGCCCACAGCCGGGCTCGGGCTTCGGCCACGGCATAGCTGGACCTTTGATTGC  959
                                                                                     
Sbjct 475  --------------------------------------------------------------------------  474

Query 960  AACGGCCTTTACAAATGGATACCAT  984
                                    
Sbjct 475  -------------------------  474