Nucleotide Global Alignment
Description
- Query:
- TRCN0000465341
- Subject:
- XR_878097.2
- Aligned Length:
- 3638
- Identities:
- 1095
- Gaps:
- 2465
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 TTCCATCCGGGTTCTTCAGCCTCGTTCCCGGGTAGTATAAAGATTGCAGTCTCCTTTGTTCGCCCTCGTTGCGC 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 AGTCGTCCTAGCGTCATTTCTGTTCCGTTCTGAAAATCGGTAGCTGTCACTGGTGCGGCGCTGCTCGGGAGGTC 148
Query 1 ---------------------------------------------------------------------ATGGT 5
|||||
Sbjct 149 CGGTCGGCGAGCTCAGAGGAGCTTGAGACCGTCGCAGTCCCCTCGGACCCCCATCGGTTAAGAGGAAAAATGGT 222
Query 6 TGAAGCAGATCGCCCAGGAAAGCTCTTCATTGGTGGGCTTAATACGGAAACAAATGAGAAAGCTCTTGAAGCAG 79
|||||||||||||||||||||||||||.|||||||||||||||||.||.||.|||||||||||.|||||.||||
Sbjct 223 TGAAGCAGATCGCCCAGGAAAGCTCTTTATTGGTGGGCTTAATACAGAGACGAATGAGAAAGCCCTTGAGGCAG 296
Query 80 TATTTGGCAAATATGGACGAATAGTGGAAGTACTCTTGATGAAAGACCGTGAAACCAACAAATCAAGAGGATTT 153
|.|||||||||||||||||||||||||||||.||.||||||||.|||||.|||||.||.||.|||||||||||.
Sbjct 297 TGTTTGGCAAATATGGACGAATAGTGGAAGTTCTTTTGATGAAGGACCGAGAAACGAATAAGTCAAGAGGATTC 370
Query 154 GCTTTTGTCACCTTTGAAAGCCCAGCAGACGCTAAGGATGCAGCCAGAGACATGAATGGAAAGTCATTAGATGG 227
|||||||||||.|||||||||||||||||.||.||||||||.|||||||||||||||||||||||.||||||||
Sbjct 371 GCTTTTGTCACTTTTGAAAGCCCAGCAGATGCAAAGGATGCTGCCAGAGACATGAATGGAAAGTCCTTAGATGG 444
Query 228 AAAAGCCATCAAGGTGGAACAAGCCACCAAACCATCATTTGAAAGTGGTAGACGTGGACCGCCTCCACCTCCAA 301
.|||||||||||||||||.||||||||||||||||||||||||||||||||||||||||..||.||||||||||
Sbjct 445 GAAAGCCATCAAGGTGGAGCAAGCCACCAAACCATCATTTGAAAGTGGTAGACGTGGACTACCCCCACCTCCAA 518
Query 302 GAAGTAGAGGCCCTCCAAGAGGTCTTAGAGGTGGAAGAGGAGGAAGTGGAGGAACCAGGGGACCTCCCTCACGG 375
||||.|||||||||||.|||||||||.||||.||||||||||||||||||||||||||.|||||.|||||.|||
Sbjct 519 GAAGCAGAGGCCCTCCCAGAGGTCTTCGAGGAGGAAGAGGAGGAAGTGGAGGAACCAGAGGACCCCCCTCCCGG 592
Query 376 GGAGGACACATGGATGACGGTGGATATTCCATGAATTTTAACATGAGTTCTTCCAGGGGACCACTCCCAGTAAA 449
|||||||||||||||||.|||||.||.|||||||||||||.|||||||||||||||.|||||.||.||||||||
Sbjct 593 GGAGGACACATGGATGATGGTGGCTACTCCATGAATTTTACCATGAGTTCTTCCAGAGGACCTCTGCCAGTAAA 666
Query 450 AAGAGGACCACCACCAAGAAGTGGGGGTCCTCCTCCTAAGAGATCTGCACCTTCAGGACCAGTTCGCAGTAGCA 523
|.||||||||||||||.|||||||.||||||||||||||.|||||.||||||||.|||||||||||.||.||||
Sbjct 667 ACGAGGACCACCACCACGAAGTGGAGGTCCTCCTCCTAAAAGATCAGCACCTTCTGGACCAGTTCGTAGCAGCA 740
Query 524 GTGGAATGGGAGGAAGAGCTCCTGTATCACGTGGAAGAGATAGTTATGGAGGTCCACCTCGAAGGGAACCGCTG 597
|||||.|||||||||||||.|||||.||.||||||||||||.||||.|||||.||.||.||||||||.||.|||
Sbjct 741 GTGGACTGGGAGGAAGAGCCCCTGTGTCCCGTGGAAGAGATGGTTACGGAGGCCCGCCACGAAGGGAGCCCCTG 814
Query 598 CCCTCTCGTAGAGATGTTTATTTGTCCCCAAGAGATGATGGGTATTCTACTAAAGACAGCTATTCAAGCAGAGA 671
||.|||||.||||||||||||||||||||.|||||||||||.|||||.||||||||||||||||||||||||||
Sbjct 815 CCTTCTCGAAGAGATGTTTATTTGTCCCCGAGAGATGATGGATATTCCACTAAAGACAGCTATTCAAGCAGAGA 888
Query 672 TTACCCAAGTTCTCGTGATACTAGAGATTATGCACCACCACCACGAGATTATACTTACCGTGATTATGGTCATT 745
.||.|||||||||||.|||||..||||||||||||||||||||.||||||||||||||||||||||||||||||
Sbjct 889 ATATCCAAGTTCTCGAGATACACGAGATTATGCACCACCACCAAGAGATTATACTTACCGTGATTATGGTCATT 962
Query 746 CCAGTTCACGTGATGACTATCCATCAAGAGGATATAGCGATAGAGATGGATATGGTCGTGATCGTGACTATTCA 819
||||||||||.||||||||||||||||||||.|||||.|||||||||||.||||||||.|||||.|||||||||
Sbjct 963 CCAGTTCACGAGATGACTATCCATCAAGAGGCTATAGTGATAGAGATGGCTATGGTCGGGATCGGGACTATTCA 1036
Query 820 GATCATCCAAGTGGAGGTTCCTACAGAGATTCATATGAGAGTTATGGTAACTCACGTAGTGCTCCACCTACACG 893
||||||||||||||||||||||||||||||||.|||||||||||||||||||||||||||||||||||||||||
Sbjct 1037 GATCATCCAAGTGGAGGTTCCTACAGAGATTCGTATGAGAGTTATGGTAACTCACGTAGTGCTCCACCTACACG 1110
Query 894 AGGGCCCCCGCCATCTTATGGTGGAAGCAGTCGCTATGATGATTACAGCAGCTCACGTGACGGATATGGTGGAA 967
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1111 AGGGCCCCCGCCATCTTATGGTGGAAGCAGTCGCTATGATGATTACAGCAGCTCACGTGACGGATATGGTGGAA 1184
Query 968 GTCGAGACAGTTACTCAAGCAGCCGAAGTGATCTCTACTCAAGTGGTCGTGATCGGGTTGGCAGACAAGAAAGA 1041
|||||||||||||||||||||||||||||||||||||||||||||||||||||||.||.|||||||||||||||
Sbjct 1185 GTCGAGACAGTTACTCAAGCAGCCGAAGTGATCTCTACTCAAGTGGTCGTGATCGCGTGGGCAGACAAGAAAGA 1258
Query 1042 GGGCTTCCCCCTTCTATGGAAAGGGGGTACCCTCCTCCACGTGATTCCTACAGCAGTTCAAGCCGCGGAGCACC 1115
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1259 GGGCTTCCCCCTTCTATGGAAAGGGGGTACCCTCCTCCACGTGATTCCTACAGCAGTTCAAGCCGCGGAGCACC 1332
Query 1116 AAGAGGTGGTGGCCGTGGAGGAAGCCGATCTGATAGAGGGGGAGGCAGAAGCAGATAC---------------- 1173
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1333 AAGAGGTGGTGGCCGTGGAGGAAGCCGATCTGATAGAGGGGGAGGCAGAAGCAGATACTAGGAACAAACAAAAC 1406
Query 1174 -------------------------------------------------------------------------- 1173
Sbjct 1407 TTTTGGACCAAAAAAATCCCCATTCAAAGCAACAAACAAAAGTGGAAACTTTCTGTCATAAACTACCCAAGGAC 1480
Query 1174 -------------------------------------------------------------------------- 1173
Sbjct 1481 TACTAAAAGGAAAAATTGTGTTACCTTTTTAAAATTTCCTGTTCCCTTTTAATAATTTTTATGTTCTTGTGAGG 1554
Query 1174 -------------------------------------------------------------------------- 1173
Sbjct 1555 GAAAAAGTAAGACGTGTTTAATTTTATTTGCTAGTATGAGCTGCTTTCAACAAGCAAATGGTAGATGTGTGAGC 1628
Query 1174 -------------------------------------------------------------------------- 1173
Sbjct 1629 CTTGACTTGTTCCTAGTGTTGTAATTTTCCAAGTGAAAGTGTCCCTGAAGGCCAGCCACTTCCTGATTTTTTTC 1702
Query 1174 -------------------------------------------------------------------------- 1173
Sbjct 1703 CCCAGTAAATGAGGCAAGCAACCCCAAGATCATCCACAAACTTCCAGCCATCTAGATGGCCTCTGGTCTCCACT 1776
Query 1174 -------------------------------------------------------------------------- 1173
Sbjct 1777 GAGAGCTGAATCGCCCTGCCTGTGCAGACAAGCTAGCCATTAGAGAGGGTTGGTTGGGTGTGCTACTTTCAGTA 1850
Query 1174 -------------------------------------------------------------------------- 1173
Sbjct 1851 TTTCAGGGTGTCTTCCAACTGAAATCTCAATCTTCGCAGTATATATATTAAAACCAACGAGCAAACCTGAGCTC 1924
Query 1174 -------------------------------------------------------------------------- 1173
Sbjct 1925 CGATGCCTAGGATGTACTGTTTACCCAGAAACCCCCCAAAAAAGCAGATGGATACTGGCCATATTTTGCTTTTT 1998
Query 1174 -------------------------------------------------------------------------- 1173
Sbjct 1999 TGACACTTCCTTGGGAATCTACAAGAACCTCCCTTCCCCCTCCCCGAGTAAGACCTAAGACCATTTAAGTGTGT 2072
Query 1174 -------------------------------------------------------------------------- 1173
Sbjct 2073 GTTAAACAACTACAAAATACTCAATAAAACGTTTGGCCAAAGTCAACCCTGAAGCTGCAAACCGATGCTTGCTC 2146
Query 1174 -------------------------------------------------------------------------- 1173
Sbjct 2147 TTACTGTTTCAAATTTTTGCAACTCTGTAGTGTCTCACTTTTAAAGGAACAGCTTGATTGCAAAGGAGAAAATA 2220
Query 1174 -------------------------------------------------------------------------- 1173
Sbjct 2221 GATAAGCAATGAAGTTATCTCCAACTTCCTAAAGGCTTATGACTTCTAAAAAGTGAATCTATCAGCATTCCACA 2294
Query 1174 -------------------------------------------------------------------------- 1173
Sbjct 2295 TCAGATTTAAAGCACCAAATGCCCGTGAAACAGCAAAGATGGTTGAATCTAATGGTCATACTGTCCTGGAGTGC 2368
Query 1174 -------------------------------------------------------------------------- 1173
Sbjct 2369 TGATTGATTGATTCACAGTAGATAAAGCTGGCAGTAAGGAACAATCAGATGCTCAGAGTTGCTGAAGCAGAGGA 2442
Query 1174 -------------------------------------------------------------------------- 1173
Sbjct 2443 ACGCTGAGACTAAGCCACAGCAGTTGCTTACCCAGTGCGCATCAGAATTGGTTTGGTACAGGCAATAGTTTGTT 2516
Query 1174 -------------------------------------------------------------------------- 1173
Sbjct 2517 TTTTTTTTTTTTTTGTCTTCAAGGGAGGGAGGATGATTAAACCGAATCAGTGCTTGTTAATCCTTAATTAGGGA 2590
Query 1174 -------------------------------------------------------------------------- 1173
Sbjct 2591 GTGGCAATCACTTAAAACTGACCCAATGGAGAGAGGGAGACTAATTGGTAAGTGGAGGTACCTACCCAAGAAGT 2664
Query 1174 -------------------------------------------------------------------------- 1173
Sbjct 2665 TCGGGTGACTCTTTGTAGACATTCAGTCGTTCGGGCAAAGTCATAGGGCAACTCTGCAATTTCGAGCTGATGAT 2738
Query 1174 -------------------------------------------------------------------------- 1173
Sbjct 2739 CACTGAGAGAAGAACATTGAATGAGCTGGGGCTGTAACTCCATGGTGAGTGCTTGCCTAAGCACCAGTGAGGCT 2812
Query 1174 -------------------------------------------------------------------------- 1173
Sbjct 2813 AGCATTCAACCCCTGGCAGGACACACAAACATTTCAGTCAGAAAAATTATACCTCACTCATGTCTGACCCATTT 2886
Query 1174 -------------------------------------------------------------------------- 1173
Sbjct 2887 GATGAATTTTGCCTCATCAGTAGGAAACATTATTAGTTGTCTTGTAAAACTAAGAAGGGGAAGAACAGTGCTGG 2960
Query 1174 -------------------------------------------------------------------------- 1173
Sbjct 2961 GAAATGAAAGTCAAAACTGGCAACGTTAGGCTAGTTAGGAAAACATATTGGGAACAAAAATAGGTCACTAGGTC 3034
Query 1174 -------------------------------------------------------------------------- 1173
Sbjct 3035 ACTGTGGTTTTATAAAAGGTACTTTACCCTCAGGGCTCCATCTTGGAAACAAACCATGAAGCTATAACTCTAGT 3108
Query 1174 -------------------------------------------------------------------------- 1173
Sbjct 3109 TTACTGCTTTGGAAACTCAGCCAGTAATGTGAACGCAGATAATCTCAACAGAAGCGGGTTGAGTTTTAGAGTCA 3182
Query 1174 -------------------------------------------------------------------------- 1173
Sbjct 3183 AAGAATTTAACTCCACTTGTGAGATTTTTCTTACGAATTTGTTACAGTGCTGTTGAGGGGATTTCAAGCCTTTC 3256
Query 1174 -------------------------------------------------------------------------- 1173
Sbjct 3257 GTCCTCTAATCAGGCCCGGAGTAGGTTCTGCTGTCAAGACCTTTAGCTCGTGACATTTTATATGCATTTTTTAG 3330
Query 1174 -------------------------------------------------------------------------- 1173
Sbjct 3331 TTTGTCATGGGCAATATTACACTAAATATGAATGTTAAATTCAAAGTGGGAAGTTGGTAGAAAATTTCAAGAGA 3404
Query 1174 -------------------------------------------------------------------------- 1173
Sbjct 3405 CTTTTTTGACAAGTGGTAGAATATAGAACTAGCAGGTCTAAAATCTGCAATTAGAAAAAAAAAATTAGCCTTGA 3478
Query 1174 -------------------------------------------------------------------------- 1173
Sbjct 3479 TTCTTCTGGCTAAACTCTGGTTGTAGAAGAATTTGAATAATACACAAAGTGCTGTGGTTTATTTGGTAGCTGGA 3552
Query 1174 -------------------------------------------------------------------------- 1173
Sbjct 3553 TGTAGAACATTATAGATCATTTATTTATTTATTTATTTATTTTGGAATGTTTTGTATTGAAGCCCAATAAAACT 3626
Query 1174 ------------ 1173
Sbjct 3627 TGAATGTGTGTC 3638
