Nucleotide Global Alignment

Description

Query:
TRCN0000465352
Subject:
NM_001368300.1
Aligned Length:
3364
Identities:
1421
Gaps:
1901

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  ATGGCCCCAAAGCACAAGAGTAGTGATGCTGGGAATTTGGATAGGCCAAAGAGAAGCCGTAAAGTGCTTCCTCT  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  AAGTGAAAAGGTGAAAGTTCTCGACTTAATCAGGAAAGACAAAAAATCCTATGCTGAGGTTGCTAAGATCTACG  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  GGAAGAATGAATCTTCCATCCGTGAAATTGTGAAGAAGGAAAAAGAAATTCGTGCTAGTTTTGCTGTCTCACCT  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  CCAACTGCTAAAGTGACGGCCACAGTGCGTGATAAGTGCTTAGTTAAGATGGAACAGGCACTGCATTTGTGGGT  296

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  297  GGAAGAGATGAACAGAAAACGTGTTCCCATTGACAGCAACATGTTGCGCCAGAAAGCTTTGAGCCTATACCAAG  370

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  371  ACTTCTGCAAGGGATGCTCTGAAACTGACACCAAGCCATTTACTGCGAGTAAGGGATGGTTACACAGATTCAGG  444

Query    1  ------------------------------------------ATGGCCCAGGTAGCAGTGTCCACCCTGCCTGT  32
                                                      ||||||||||||||||||||||||||||||||
Sbjct  445  CATAGATTCTCACATCATTACAAGAAGAAGAAGAAGGGGATCATGGCCCAGGTAGCAGTGTCCACCCTGCCTGT  518

Query   33  TGAAGAAGAGTCCTCCTCAGAGACCAGGATGGTGGTGACATTCCTCGTGTCTGCCCTCGAATCCATGTGTAAAG  106
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  519  TGAAGAAGAGTCCTCCTCAGAGACCAGGATGGTGGTGACATTCCTCGTGTCTGCCCTCGAATCCATGTGTAAAG  592

Query  107  AACTGGCCAAGTCCAAGGCAGAAGTGGCCTGCATCGCAGTGTACGAAACAGACGTGTTTGTCGTCGGAACCGAG  180
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  593  AACTGGCCAAGTCCAAGGCAGAAGTGGCCTGCATCGCAGTGTACGAAACAGACGTGTTTGTCGTCGGAACCGAG  666

Query  181  AGAGGATGCGCTTTTGTTAATGCCAGGACGGATTTTCAGAAAGATTTTGCAAAATACTGCGTTGCAGAGGGACT  254
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  667  AGAGGATGCGCTTTTGTTAATGCCAGGACGGATTTTCAGAAAGATTTTGCAAAATACTGCGTTGCAGAGGGACT  740

Query  255  GTGTGAGGTGAAACCTCCCTGCCCTGTGAACGGGATGCAGGTCCACTCGGGCGAAACGGAAATACTCAGGAAGG  328
            ||||||||||||||||||||||||||||||||||||||||||||||||.|||||||||||||||||||||||||
Sbjct  741  GTGTGAGGTGAAACCTCCCTGCCCTGTGAACGGGATGCAGGTCCACTCAGGCGAAACGGAAATACTCAGGAAGG  814

Query  329  CAGTGGAGGACTATTTCTGCTTTTGTTATGGTAAAGCCTTAGGGACAACAGTGATGGTGCCTGTTCCCTATGAG  402
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  815  CAGTGGAGGACTATTTCTGCTTTTGTTATGGTAAAGCCTTAGGGACAACAGTGATGGTGCCTGTTCCCTATGAG  888

Query  403  AAGATGCTGCGAGACCAGTCGGCTGTGGTAGTGCAGGGGCTTCCGGAAGGCGTTGCCTTTCAACACCCTGAGAA  476
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  889  AAGATGCTGCGAGACCAGTCGGCTGTGGTAGTGCAGGGGCTTCCGGAAGGCGTTGCCTTTCAACACCCTGAGAA  962

Query  477  TTACGACCTTGCAACCCTGAAATGGATTTTGGAGAACAAAGCAGGGATTTCATTCATCATAAATAGACCCTTCC  550
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  963  TTACGACCTTGCAACCCTGAAATGGATTTTGGAGAACAAAGCAGGGATTTCATTCATCATAAATAGACCCTTCC  1036

Query  551  TAGGACCAGAGAGTCAGCTGGGTGGCCCTGGGATGGTAACAGATGCGGAGAGATCCATAGTATCACCAAGTGAA  624
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037  TAGGACCAGAGAGTCAGCTGGGTGGCCCTGGGATGGTAACAGATGCGGAGAGATCCATAGTATCACCAAGTGAA  1110

Query  625  AGCTGCGGCCCCATCAATGTGAAAACTGAACCCATGGAAGATTCTGGCATTTCACTGAAAGCAGAAGCTGTCTC  698
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1111  AGCTGCGGCCCCATCAATGTGAAAACTGAACCCATGGAAGATTCTGGCATTTCACTGAAAGCAGAAGCTGTCTC  1184

Query  699  AGTCAAGAAAGAATCAGAAGATCCTAATTACTATCAATATAATATGCAAGGAAGCCACCCTTCTTCCACAAGCA  772
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1185  AGTCAAGAAAGAATCAGAAGATCCTAATTACTATCAATATAATATGCAAGGAAGCCACCCTTCTTCCACAAGCA  1258

Query  773  ATGAAGTAATAGAAATGGAATTACCAATGGAAGATTCCACTCCGCTGGTCCCTTCAGAAGAACCAAATGAGGAC  846
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1259  ATGAAGTAATAGAAATGGAATTACCAATGGAAGATTCCACTCCGCTGGTCCCTTCAGAAGAACCAAATGAGGAC  1332

Query  847  CCTGAAGCCGAGGTGAAAATCGAAGGAAACACAAATTCATCCAGTGTTACAAATTCTGCAGCAGGTGTTGAAGA  920
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1333  CCTGAAGCCGAGGTGAAAATCGAAGGAAACACAAATTCATCCAGTGTTACAAATTCTGCAGCAGGTGTTGAAGA  1406

Query  921  TCTTAACATCGTTCAAGTGACTGTTCCAGATAATGAGAAGGAAAGATTATCAAGCATTGAAAAGATTAAACAGC  994
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1407  TCTTAACATCGTTCAAGTGACTGTTCCAGATAATGAGAAGGAAAGATTATCAAGCATTGAAAAGATTAAACAGC  1480

Query  995  TAAGAGAACAAGTTAATGACCTCTTTAGCCGAAAATTTGGTGAAGCAATTGGCGTGGATTTCCCTGTGAAAGTT  1068
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1481  TAAGAGAACAAGTTAATGACCTCTTTAGCCGAAAATTTGGTGAAGCAATTGGCGTGGATTTCCCTGTGAAAGTT  1554

Query 1069  CCCTACAGGAAGATCACATTCAACCCTGGCTGTGTGGTGATTGATGGCATGCCCCCGGGGGTGGTATTCAAGGC  1142
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1555  CCCTACAGGAAGATCACATTCAACCCTGGCTGTGTGGTGATTGATGGCATGCCCCCGGGGGTGGTATTCAAGGC  1628

Query 1143  CCCCGGCTATCTGGAAATCAGTTCCATGAGGAGGATCTTGGAGGCAGCTGAGTTTATCAAATTCACAGTCATCA  1216
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1629  CCCCGGCTATCTGGAAATCAGTTCCATGAGGAGGATCTTGGAGGCAGCTGAGTTTATCAAATTCACAGTCATCA  1702

Query 1217  GGCCGCTTCCAGGGCTTGAGCTCAGTAATGGACTTTTGGAGGCCG-------GGGCAGGAGGATTGCTTGAGGC  1283
            ||||||||||||||||||||||||||||||     |.|||...||       |..||||||          |||
Sbjct 1703  GGCCGCTTCCAGGGCTTGAGCTCAGTAATG-----TGGGAAAACGCAAGATAGACCAGGAG----------GGC  1761

Query 1284  CGGGAGTTTGA---------GGCCAG------------CCTGG--------------GCAACATGGC-------  1315
            ||.|.||||.|         ||..||            |.|||              .|||||||.|       
Sbjct 1762  CGTGTGTTTCAAGAAAAGTGGGAGAGAGCGTATTTCTTCGTGGAAGTACAGAATATTCCAACATGTCTCATATG  1835

Query 1316  ------AAGACCCCATCTC----TACAAAAAATTTAA---AA------------------------------AT  1346
                  |||    |||.||    |.||||.|||.|||   ||                              ||
Sbjct 1836  CAAACAAAG----CATGTCTGTGTCCAAAGAATATAACCTAAGACGCCACTATCAAACCAATCACAGCAAGCAT  1905

Query 1347  T------------------------------------------AGCTGGAAACAGTGGCTC-------------  1365
            |                                          |||||.|||.|| |||||             
Sbjct 1906  TATGACCAGTATATGGAAAGAATGCGTGACGAGAAGCTTCACGAGCTGAAAAAAG-GGCTCAGGAAGTATCTCT  1978

Query 1366  ------------ACACC---TGTAGCCCCAGC---------TACTTG---------------------------  1388
                        |||||   |||  |||.|||         |..|||                           
Sbjct 1979  TAGGCTCATCAGACACCGAGTGT--CCCGAGCAAAAACAAGTGTTTGCAAACCCAAGTCCAACCCAGAAATCCC  2050

Query 1389  ----GCAGGCTGAAGCGGGAGGA--TCGCT-TGAACTCA--GGAG------------------------TTTGA  1429
                ||||.|||.|    |||||  |.||| .|||||.|  ||||                        ||||.
Sbjct 2051  CCGTGCAGCCTGTA----GAGGACCTAGCTGGGAACTTATGGGAGAAGTTACGTGAAAAAATCAGGTCTTTTGT  2120

Query 1430  GACA---------GCA------GAGAAC-----CATAATTGCAATACTGCACTCCAG---------------CC  1468
            |.||         |||      ||||.|     .||||.|  |||||  ||| ||||               |.
Sbjct 2121  GGCATATTCTATCGCAATCGATGAGATCACGGATATAAAT--AATAC--CAC-CCAGTTGGCCATATTCATCCG  2189

Query 1469  TGG-------------------GTGACAGAACAA------GACCCTGTCTC-----------------------  1494
            |||                   |||.|.|||.||      |||.|.||..|                       
Sbjct 2190  TGGTGTCGATGAGAATTTCGATGTGTCCGAAGAACTTCTGGACACGGTGCCCATGACGGGTACAAAATCTGGCA  2263

Query 1495  --------------------------------------------------------------------------  1494
                                                                                      
Sbjct 2264  ACGAGATCTTTTCGCGTGTTGAGAAAAGCCTGAAAAACTTCTGTATCGACTGGTCGAAATTAGTAAGCGTGGCC  2337

Query 1495  --------------------------------------------------------------------------  1494
                                                                                      
Sbjct 2338  TCCACTGGCACCCCAGCGATGGTGGATGCCAATAACGGGCTTGTCACAAAACTGAAGTCCAGGGTGGCGACGTT  2411

Query 1495  --------------------------------------------------------------------------  1494
                                                                                      
Sbjct 2412  CTGCAAGGGTGCGGAACTGAAGTCCATCTGTTGTATAATTCATCCGGAATCACTCTGTGCTCAGAAGTTGAAGA  2485

Query 1495  --------------------------------------------------------------------------  1494
                                                                                      
Sbjct 2486  TGGACCACGTCATGGACGTGGTAGTGAAGTCCGTGAACTGGATATGCTCCCGGGGACTGAACCACAGTGAGTTC  2559

Query 1495  --------------------------------------------------------------------------  1494
                                                                                      
Sbjct 2560  ACAACCTTGCTCTATGAGCTGGACAGCCAGTATGGTAGCCTCCTGTACTACACGGAGATTAAGTGGCTCAGTCG  2633

Query 1495  --------------------------------------------------------------------------  1494
                                                                                      
Sbjct 2634  CGGGCTCGTGCTAAAGAGATTTTTCGAATCCTTGGAAGAAATCGACTCCTTCATGTCATCCAGAGGGAAACCCC  2707

Query 1495  --------------------------------------------------------------------------  1494
                                                                                      
Sbjct 2708  TGCCTCAACTGAGCTCCATAGATTGGATCCGAGACCTGGCCTTCTTGGTTGACATGACGATGCATCTGAACGCT  2781

Query 1495  --------------------------------------------------------------------------  1494
                                                                                      
Sbjct 2782  TTGAACATCTCTCTCCAAGGACACTCCCAAATCGTCACGCAGATGTATGACCTGATCCGGGCGTTCCTAGCAAA  2855

Query 1495  --------------------------------------------------------------------------  1494
                                                                                      
Sbjct 2856  ACTGTGCCTCTGGGAGACTCATTTGACGAGGAATAATCTGGCCCACTTTCCCACCCTGAAATTGGCTTCCAGAA  2929

Query 1495  --------------------------------------------------------------------------  1494
                                                                                      
Sbjct 2930  ATGAAAGCGATGGCCTGAACTACATTCCCAAAATCGCGGAACTCCAGACCGAATTCCAGAAAAGGCTGTCTGAT  3003

Query 1495  --------------------------------------------------------------------------  1494
                                                                                      
Sbjct 3004  TTCAAACTCTACGAAAGCGAACTGACTCTGTTCAGCTCCCCGTTCTCCACGAAGATCGACAGTGTGCACGAGGA  3077

Query 1495  --------------------------------------------------------------------------  1494
                                                                                      
Sbjct 3078  GCTCCAGATGGAGGTTATCGACCTGCAATGCAACACGGTCCTGAAGACGAAATACGACAAGGTGGGAATACCAG  3151

Query 1495  --------------------------------------------------------------------------  1494
                                                                                      
Sbjct 3152  AATTCTACAAGTACCTCTGGGGTAGCTACCCGAAATACAAGCACCATTGCGCAAAGATTCTTTCCATGTTCGGG  3225

Query 1495  --------------------------------------------------------------------------  1494
                                                                                      
Sbjct 3226  AGCACCTACATCTGCGAACAGCTGTTCTCCATTATGAAACTGAGCAAAACAAAATACTGCTCCCAGTTAAAGGA  3299

Query 1495  ----------------------------------  1494
                                              
Sbjct 3300  TTCCCAGTGGGATTCTGTACTCCACATCGCAACG  3333

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