Nucleotide Global Alignment

Description

Query:
TRCN0000465424
Subject:
XM_011516913.2
Aligned Length:
2452
Identities:
1475
Gaps:
935

Alignment

Query    1  ATGTCATACGGATCCATCGCCCGTGGAGGTGGCCTGGGGAGCCGTGGCCCTTTCGGGGGACCTTCGAGACAAGG  74
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct    1  ATGTCATACGGATCCATCGCCCGTGGAGGTGGCCTGGGGAGCCGTGGCCCTTTCGGGGGACCTTCGAGACAAGG  74

Query   75  CTGTCAGCCCCTAGAGTGCGCTAGATGTTGGACCGAGTATGGAATCCGCCATTTCCCCTGCCCGTCGCCAGAGA  148
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct   75  CTGTCAGCCCCTAGAGTGCGCTAGATGTTGGACCGAGTATGGAATCCGCCATTTCCCCTGCCCGTCGCCAGAGA  148

Query  149  GCAAGCTGCAGAACCGCTGTGTGGGGAAGGACGGGGAAGGTGATCTGGGGCCAGCAGGCACGCCTATTGTCCCA  222
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  149  GCAAGCTGCAGAACCGCTGTGTGGGGAAGGACGGGGAAGGTGATCTGGGGCCAGCAGGCACGCCTATTGTCCCA  222

Query  223  AGGGCCAGGAAGCGAGGGCCTGGGGTTGCCCCTGAAGGCAGCCGGATGCCGGAGCCCACCTCATCACCCACCAT  296
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  223  AGGGCCAGGAAGCGAGGGCCTGGGGTTGCCCCTGAAGGCAGCCGGATGCCGGAGCCCACCTCATCACCCACCAT  296

Query  297  TGGCCCGAGGAAGGACTCGGCTGCTGGGCCCCATGGCCGGATGGCGGGGCCCAGCACTACCCGGGCCAAGAAGA  370
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  297  TGGCCCGAGGAAGGACTCGGCTGCTGGGCCCCATGGCCGGATGGCGGGGCCCAGCACTACCCGGGCCAAGAAGA  370

Query  371  GGAAGCCCAACTTCTGCCCGCAGGAGACCGAGGTGCTGGTGTCCAAGGTGAGCAAGCACCACCAGCTGCTGTTT  444
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  371  GGAAGCCCAACTTCTGCCCGCAGGAGACCGAGGTGCTGGTGTCCAAGGTGAGCAAGCACCACCAGCTGCTGTTT  444

Query  445  GGCACGGGGCTGCTGAAGGCCGAGCCCACTCGCAGGTACCGCGTGTGGAGCCGCATCCTGCAGGCCGTGAATGC  518
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  445  GGCACGGGGCTGCTGAAGGCCGAGCCCACTCGCAGGTACCGCGTGTGGAGCCGCATCCTGCAGGCCGTGAATGC  518

Query  519  GCTGGGCTACTGTCGCCGCGACGTTGTGGACCTGAAGCACAAGTGGCGGGACCTACGAGCCGTCGTGCGGCGCA  592
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  519  GCTGGGCTACTGTCGCCGCGACGTTGTGGACCTGAAGCACAAGTGGCGGGACCTACGAGCCGTCGTGCGGCGCA  592

Query  593  AGCTGGGCGACCTCCGGAAGGCGGCCCATGGCCCCAGCCCTGGTTCCGGCAAGCCCCAGGCCCTGGCTCTCACG  666
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  593  AGCTGGGCGACCTCCGGAAGGCGGCCCATGGCCCCAGCCCTGGTTCCGGCAAGCCCCAGGCCCTGGCTCTCACG  666

Query  667  CCCGTGGAGCAGGTGGTGGCCAAGACCTTCTCTTGCCAGGCCCTGCCCTCCGAGGGCTTCAGTCTGGAGCCGCC  740
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  667  CCCGTGGAGCAGGTGGTGGCCAAGACCTTCTCTTGCCAGGCCCTGCCCTCCGAGGGCTTCAGTCTGGAGCCGCC  740

Query  741  CAGAGCCACCCAGGTCGATCCGTGCAACCTCCAGGAGCTGTTCCAGGAGATGTCGGCCAACGTCTTCCGAATCA  814
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  741  CAGAGCCACCCAGGTCGATCCGTGCAACCTCCAGGAGCTGTTCCAGGAGATGTCGGCCAACGTCTTCCGAATCA  814

Query  815  ACTCCAGTGTGACCTCCTTGGAGCGGAGCCTTCAGTCCTTAGGGACACCGAGTGACACGCAGGAGCTTCGGGAC  888
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  815  ACTCCAGTGTGACCTCCTTGGAGCGGAGCCTTCAGTCCTTAGGGACACCGAGTGACACGCAGGAGCTTCGGGAC  888

Query  889  AGCCTGCACACGGCACAGCAGGAGACCAACAAGACCATTGCAGCCAGCGCCAGCTCCGTGAAGCAGATGGCCGA  962
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  889  AGCCTGCACACGGCACAGCAGGAGACCAACAAGACCATTGCAGCCAGCGCCAGCTCCGTGAAGCAGATGGCCGA  962

Query  963  GCTGCTGCGCAGCTCCTGCCCGCAGGAGCGTCTGCAGCAGGAGCGTCCTCAGCTGGACCGGCTGAAAACCCAGC  1036
            |||||||||||||||||||||   ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  963  GCTGCTGCGCAGCTCCTGCCC---GGAGCGTCTGCAGCAGGAGCGTCCTCAGCTGGACCGGCTGAAAACCCAGC  1033

Query 1037  TCTCAGATGCCATTCAGTGCTATGGAGTGGTGCAGAAGAAAATTGCAGAAAAGTCCAGAGCGCTGCTTCCCATG  1110
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1034  TCTCAGATGCCATTCAGTGCTATGGAGTGGTGCAGAAGAAAATTGCAGAAAAGTCCAGAGCGCTGCTTCCCATG  1107

Query 1111  GCGCAGAGGGGCAGTAAA---CAGAGTCCCCAGGCCCCGTTTGCCGAGCTGGCTGATGATGAGAAGGTCTTTAA  1181
            ||||||||||||||||||   |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1108  GCGCAGAGGGGCAGTAAACAGCAGAGTCCCCAGGCCCCGTTTGCCGAGCTGGCTGATGATGAGAAGGTCTTTAA  1181

Query 1182  CGGGAGTGACAACATGTGGCAGGGCCAGGAGCAGGCGCTGCTCCCGGACATCACTGAAGAGGACCTGGAGGCCA  1255
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1182  CGGGAGTGACAACATGTGGCAGGGCCAGGAGCAGGCGCTGCTCCCGGACATCACTGAAGAGGACCTGGAGGCCA  1255

Query 1256  TCCGGCTGCGGGAGGAGGCCATCCTGCAGATGGAGAGCAACTTGCTGGATGTGAATCAGATCATCAAGGACTTG  1329
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1256  TCCGGCTGCGGGAGGAGGCCATCCTGCAGATGGAGAGCAACTTGCTGGATGTGAATCAGATCATCAAGGACTTG  1329

Query 1330  GCCTCCATGGTGTCAGAGCAAGGAGAAGCTGTTG------ATAGTATTGAAGCCA---GCCTTGAG-GCTGCGT  1393
            ||||||||||||||||||||||||||||||||||      ..||.|...||||||   |||...|| |||||..
Sbjct 1330  GCCTCCATGGTGTCAGAGCAAGGAGAAGCTGTTGGGTCCAGCAGCAGCAAAGCCATCTGCCAGCAGAGCTGCAG  1403

Query 1394  CCTC--GCATGCGGAGGCAGCCCGCCAGCT-----CCTGGCTGGAGC----CAGCC---------GGCACCAAC  1447
            ||.|  ||..||.|.||||||||..|.|||     ||.|||.|| ||    ||.||         |||.||.||
Sbjct 1404  CCCCGAGCCGGCCGCGGCAGCCCTGCTGCTGGGTGCCGGGCCGG-GCTCCACACCCCTGCGGCCGGGCCCCCAC  1476

Query 1448  TCC-------AGAGACACAAGATCAA----------------------GTGCTGCTTC----------------  1476
            |||       |||.||.||||..|||                      ||||||.|.|                
Sbjct 1477  TCCCGCACCAAGACACGCAAGCCCAACTTCAGCCCCCAGGAGACGGAGGTGCTGGTGCAGAGGGTGCGGCGCCA  1550

Query 1477  CTATCAGCTGGAG-TCACTGCCCTGCTTGTCATCATCATCATCATCGCCACCTCTGTCCGAAAG----------  1539
            |||.|.||||..| ||...||.||||..|.||                |||  |||.|||||||          
Sbjct 1551  CTACCCGCTGCTGTTCGGGGCGCTGCGGGGCA----------------CAC--CTGCCCGAAAGCACCGCGTGT  1606

Query 1540  --------------------------------------------------------------------------  1539
                                                                                      
Sbjct 1607  GGAGCCGCATCCTGCAGGCAGTGAACGCGCTGGGCTACTGCCGCCGCGACCTGGGGGACCTCAAGCACAAGTGG  1680

Query 1540  --------------------------------------------------------------------------  1539
                                                                                      
Sbjct 1681  CGGGACCTGCGAGGTGCTGTGCGCAAGAAGCTGGCGGAGGGCGGCCCCGCCCCCGGCCTCCTCCTCACACCTGT  1754

Query 1540  --------------------------------------------------------------------------  1539
                                                                                      
Sbjct 1755  GGAGCGCATGGTGGCAGAGACCTTTTCTGCCCACGGTCCCCAAGGCGAGGGCCAGACCACGGAGCCCCTGCCAA  1828

Query 1540  --------------------------------------------------------------------------  1539
                                                                                      
Sbjct 1829  CTGATGAGGAGGACGAGACCCCCAGCTGCTTGTGGCTGCCCCTGAGGTCCCTGGAAGGGCCCAGCCTGCCTGAA  1902

Query 1540  --------------------------------------------------------------------------  1539
                                                                                      
Sbjct 1903  CCTGACCCCCTGGACTTACGAGGAGTCTTCCACGCACCCACCTCCTCACCCTCCCCACCTGCTTCCCCAGCCTC  1976

Query 1540  --------------------------------------------------------------------------  1539
                                                                                      
Sbjct 1977  CACCCCACCAGCAACCACACTCATGGGGGCCTTCCAGCCTTCCCCGCCCTCTTCGGCGCCAGCACCTCCCTTGC  2050

Query 1540  --------------------------------------------------------------------------  1539
                                                                                      
Sbjct 2051  CCTCCAGGAGGACCCCAGCGGCAGCATCTGAAACGTCCGCATTTGAGCAGCAGCTGCTGGACTCCCACCGGCAG  2124

Query 1540  --------------------------------------------------------------------------  1539
                                                                                      
Sbjct 2125  CAGGGCGCCCTGCTGTCCTCCTGGGCCCAGCAGCAGAGCACACTCATGGCCCAGCAAAACCTGCTGCTGCAGCG  2198

Query 1540  --------------------------------------------------------------------------  1539
                                                                                      
Sbjct 2199  GCTGGCCGAGCAGAGCCAGCGTCTGGCCGATGGCGTGGAGGCCCTCAACCGGACCCTCGAGAGGCTGGTGGAAG  2272

Query 1540  --------------------------------------------------------------------------  1539
                                                                                      
Sbjct 2273  CACGCCCTACCCGGGAAGCCTCACCCTCACTCCAGGACGGTAGTCCTGCCAGTGGAGTGGCCCAGGGGCCTGCT  2346

Query 1540  --------------------------------------------------------------------------  1539
                                                                                      
Sbjct 2347  GGAGGCTCCCAGGACAGCCCCAAGGGCACCCACTCGGGGCTCGAGGTCTTCTCAGGGATGATCTTGAAGGTGGA  2420

Query 1540  ----------  1539
                      
Sbjct 2421  GGAGGAGATA  2430

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