Nucleotide Global Alignment
Description
- Query:
- TRCN0000465424
- Subject:
- XM_011516917.2
- Aligned Length:
- 2452
- Identities:
- 1478
- Gaps:
- 932
Alignment
Query 1 ATGTCATACGGATCCATCGCCCGTGGAGGTGGCCTGGGGAGCCGTGGCCCTTTCGGGGGACCTTCGAGACAAGG 74
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1 ATGTCATACGGATCCATCGCCCGTGGAGGTGGCCTGGGGAGCCGTGGCCCTTTCGGGGGACCTTCGAGACAAGG 74
Query 75 CTGTCAGCCCCTAGAGTGCGCTAGATGTTGGACCGAGTATGGAATCCGCCATTTCCCCTGCCCGTCGCCAGAGA 148
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 75 CTGTCAGCCCCTAGAGTGCGCTAGATGTTGGACCGAGTATGGAATCCGCCATTTCCCCTGCCCGTCGCCAGAGA 148
Query 149 GCAAGCTGCAGAACCGCTGTGTGGGGAAGGACGGGGAAGGTGATCTGGGGCCAGCAGGCACGCCTATTGTCCCA 222
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 149 GCAAGCTGCAGAACCGCTGTGTGGGGAAGGACGGGGAAGGTGATCTGGGGCCAGCAGGCACGCCTATTGTCCCA 222
Query 223 AGGGCCAGGAAGCGAGGGCCTGGGGTTGCCCCTGAAGGCAGCCGGATGCCGGAGCCCACCTCATCACCCACCAT 296
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 223 AGGGCCAGGAAGCGAGGGCCTGGGGTTGCCCCTGAAGGCAGCCGGATGCCGGAGCCCACCTCATCACCCACCAT 296
Query 297 TGGCCCGAGGAAGGACTCGGCTGCTGGGCCCCATGGCCGGATGGCGGGGCCCAGCACTACCCGGGCCAAGAAGA 370
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 297 TGGCCCGAGGAAGGACTCGGCTGCTGGGCCCCATGGCCGGATGGCGGGGCCCAGCACTACCCGGGCCAAGAAGA 370
Query 371 GGAAGCCCAACTTCTGCCCGCAGGAGACCGAGGTGCTGGTGTCCAAGGTGAGCAAGCACCACCAGCTGCTGTTT 444
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 GGAAGCCCAACTTCTGCCCGCAGGAGACCGAGGTGCTGGTGTCCAAGGTGAGCAAGCACCACCAGCTGCTGTTT 444
Query 445 GGCACGGGGCTGCTGAAGGCCGAGCCCACTCGCAGGTACCGCGTGTGGAGCCGCATCCTGCAGGCCGTGAATGC 518
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 GGCACGGGGCTGCTGAAGGCCGAGCCCACTCGCAGGTACCGCGTGTGGAGCCGCATCCTGCAGGCCGTGAATGC 518
Query 519 GCTGGGCTACTGTCGCCGCGACGTTGTGGACCTGAAGCACAAGTGGCGGGACCTACGAGCCGTCGTGCGGCGCA 592
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 GCTGGGCTACTGTCGCCGCGACGTTGTGGACCTGAAGCACAAGTGGCGGGACCTACGAGCCGTCGTGCGGCGCA 592
Query 593 AGCTGGGCGACCTCCGGAAGGCGGCCCATGGCCCCAGCCCTGGTTCCGGCAAGCCCCAGGCCCTGGCTCTCACG 666
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 593 AGCTGGGCGACCTCCGGAAGGCGGCCCATGGCCCCAGCCCTGGTTCCGGCAAGCCCCAGGCCCTGGCTCTCACG 666
Query 667 CCCGTGGAGCAGGTGGTGGCCAAGACCTTCTCTTGCCAGGCCCTGCCCTCCGAGGGCTTCAGTCTGGAGCCGCC 740
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 667 CCCGTGGAGCAGGTGGTGGCCAAGACCTTCTCTTGCCAGGCCCTGCCCTCCGAGGGCTTCAGTCTGGAGCCGCC 740
Query 741 CAGAGCCACCCAGGTCGATCCGTGCAACCTCCAGGAGCTGTTCCAGGAGATGTCGGCCAACGTCTTCCGAATCA 814
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 741 CAGAGCCACCCAGGTCGATCCGTGCAACCTCCAGGAGCTGTTCCAGGAGATGTCGGCCAACGTCTTCCGAATCA 814
Query 815 ACTCCAGTGTGACCTCCTTGGAGCGGAGCCTTCAGTCCTTAGGGACACCGAGTGACACGCAGGAGCTTCGGGAC 888
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 815 ACTCCAGTGTGACCTCCTTGGAGCGGAGCCTTCAGTCCTTAGGGACACCGAGTGACACGCAGGAGCTTCGGGAC 888
Query 889 AGCCTGCACACGGCACAGCAGGAGACCAACAAGACCATTGCAGCCAGCGCCAGCTCCGTGAAGCAGATGGCCGA 962
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 889 AGCCTGCACACGGCACAGCAGGAGACCAACAAGACCATTGCAGCCAGCGCCAGCTCCGTGAAGCAGATGGCCGA 962
Query 963 GCTGCTGCGCAGCTCCTGCCCGCAGGAGCGTCTGCAGCAGGAGCGTCCTCAGCTGGACCGGCTGAAAACCCAGC 1036
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 963 GCTGCTGCGCAGCTCCTGCCCGCAGGAGCGTCTGCAGCAGGAGCGTCCTCAGCTGGACCGGCTGAAAACCCAGC 1036
Query 1037 TCTCAGATGCCATTCAGTGCTATGGAGTGGTGCAGAAGAAAATTGCAGAAAAGTCCAGAGCGCTGCTTCCCATG 1110
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037 TCTCAGATGCCATTCAGTGCTATGGAGTGGTGCAGAAGAAAATTGCAGAAAAGTCCAGAGCGCTGCTTCCCATG 1110
Query 1111 GCGCAGAGGGGCAGTAAA---CAGAGTCCCCAGGCCCCGTTTGCCGAGCTGGCTGATGATGAGAAGGTCTTTAA 1181
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1111 GCGCAGAGGGGCAGTAAACAGCAGAGTCCCCAGGCCCCGTTTGCCGAGCTGGCTGATGATGAGAAGGTCTTTAA 1184
Query 1182 CGGGAGTGACAACATGTGGCAGGGCCAGGAGCAGGCGCTGCTCCCGGACATCACTGAAGAGGACCTGGAGGCCA 1255
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1185 CGGGAGTGACAACATGTGGCAGGGCCAGGAGCAGGCGCTGCTCCCGGACATCACTGAAGAGGACCTGGAGGCCA 1258
Query 1256 TCCGGCTGCGGGAGGAGGCCATCCTGCAGATGGAGAGCAACTTGCTGGATGTGAATCAGATCATCAAGGACTTG 1329
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1259 TCCGGCTGCGGGAGGAGGCCATCCTGCAGATGGAGAGCAACTTGCTGGATGTGAATCAGATCATCAAGGACTTG 1332
Query 1330 GCCTCCATGGTGTCAGAGCAAGGAGAAGCTGTTG------ATAGTATTGAAGCCA---GCCTTGAG-GCTGCGT 1393
|||||||||||||||||||||||||||||||||| ..||.|...|||||| |||...|| |||||..
Sbjct 1333 GCCTCCATGGTGTCAGAGCAAGGAGAAGCTGTTGGGTCCAGCAGCAGCAAAGCCATCTGCCAGCAGAGCTGCAG 1406
Query 1394 CCTC--GCATGCGGAGGCAGCCCGCCAGCT-----CCTGGCTGGAGC----CAGCC---------GGCACCAAC 1447
||.| ||..||.|.||||||||..|.||| ||.|||.|| || ||.|| |||.||.||
Sbjct 1407 CCCCGAGCCGGCCGCGGCAGCCCTGCTGCTGGGTGCCGGGCCGG-GCTCCACACCCCTGCGGCCGGGCCCCCAC 1479
Query 1448 TCC-------AGAGACACAAGATCAA----------------------GTGCTGCTTC---------------- 1476
||| |||.||.||||..||| ||||||.|.|
Sbjct 1480 TCCCGCACCAAGACACGCAAGCCCAACTTCAGCCCCCAGGAGACGGAGGTGCTGGTGCAGAGGGTGCGGCGCCA 1553
Query 1477 CTATCAGCTGGAG-TCACTGCCCTGCTTGTCATCATCATCATCATCGCCACCTCTGTCCGAAAG---------- 1539
|||.|.||||..| ||...||.||||..|.|| ||| |||.|||||||
Sbjct 1554 CTACCCGCTGCTGTTCGGGGCGCTGCGGGGCA----------------CAC--CTGCCCGAAAGCACCGCGTGT 1609
Query 1540 -------------------------------------------------------------------------- 1539
Sbjct 1610 GGAGCCGCATCCTGCAGGCAGTGAACGCGCTGGGCTACTGCCGCCGCGACCTGGGGGACCTCAAGCACAAGTGG 1683
Query 1540 -------------------------------------------------------------------------- 1539
Sbjct 1684 CGGGACCTGCGAGGTGCTGTGCGCAAGAAGCTGGCGGAGGGCGGCCCCGCCCCCGGCCTCCTCCTCACACCTGT 1757
Query 1540 -------------------------------------------------------------------------- 1539
Sbjct 1758 GGAGCGCATGGTGGCAGAGACCTTTTCTGCCCACGGTCCCCAAGGCGAGGGCCAGACCACGGAGCCCCTGCCAA 1831
Query 1540 -------------------------------------------------------------------------- 1539
Sbjct 1832 CTGATGAGGAGGACGAGACCCCCAGCTGCTTGTGGCTGCCCCTGAGGTCCCTGGAAGGGCCCAGCCTGCCTGAA 1905
Query 1540 -------------------------------------------------------------------------- 1539
Sbjct 1906 CCTGACCCCCTGGACTTACGAGGAGTCTTCCACGCACCCACCTCCTCACCCTCCCCACCTGCTTCCCCAGCCTC 1979
Query 1540 -------------------------------------------------------------------------- 1539
Sbjct 1980 CACCCCACCAGCAACCACACTCATGGGGGCCTTCCAGCCTTCCCCGCCCTCTTCGGCGCCAGCACCTCCCTTGC 2053
Query 1540 -------------------------------------------------------------------------- 1539
Sbjct 2054 CCTCCAGGAGGACCCCAGCGGCAGCATCTGAAACGTCCGCATTTGAGCAGCAGCTGCTGGACTCCCACCGGCAG 2127
Query 1540 -------------------------------------------------------------------------- 1539
Sbjct 2128 CAGGGCGCCCTGCTGTCCTCCTGGGCCCAGCAGCAGAGCACACTCATGGCCCAGCAAAACCTGCTGCTGCAGCG 2201
Query 1540 -------------------------------------------------------------------------- 1539
Sbjct 2202 GCTGGCCGAGCAGAGCCAGCGTCTGGCCGATGGCGTGGAGGCCCTCAACCGGACCCTCGAGAGGCTGGTGGAAG 2275
Query 1540 -------------------------------------------------------------------------- 1539
Sbjct 2276 CACGCCCTACCCGGGAAGCCTCACCCTCACTCCAGGACGGTAGTCCTGCCAGTGGAGTGGCCCAGGGGCCTGCT 2349
Query 1540 -------------------------------------------------------------------------- 1539
Sbjct 2350 GGAGGCTCCCAGGACAGCCCCAAGGGCACCCACTCGGGGCTCGAGGTCTTCTCAGGGATGATCTTGAAGGTGGA 2423
Query 1540 ---------- 1539
Sbjct 2424 GGAGGAGATA 2433