Nucleotide Global Alignment
Description
- Query:
- TRCN0000465457
- Subject:
- XM_011525767.2
- Aligned Length:
- 1979
- Identities:
- 674
- Gaps:
- 1270
Alignment
Query 1 ATGAAACAGCCCAACAGGAAAAGGAAGCTTAATATGGATTCCAAAGAGCGTTTGGATCAGGACGGACGCTTGGA 74
Sbjct 1 -------------------------------------------------------------------------- 0
Query 75 GCAAGCTGAAGAGGAAAAGAAGCCCAAGGATAGCACAACCCCTTTGAGTCACGTCCCTTCAGCGGCTGCACAGG 148
Sbjct 1 -------------------------------------------------------------------------- 0
Query 149 GAGCATGGTCTTGGGAGTGGTACTTGAAAGAACAGAAGGCTGTCGCAGCACCTGTTGAGCTGTTTTCCAAGGAT 222
Sbjct 1 -------------------------------------------------------------------------- 0
Query 223 CAGTCCTTTCCAGAGCATGAAAATGGTTTTCAGATTGGAATGAGATTAGAAGGCATTGATCCCCGACATCCATC 296
Sbjct 1 -------------------------------------------------------------------------- 0
Query 297 GGTATTCTGTGTGCTTTCTGTAGCGGAGGTTTGTGGTTACCGTCTAAGACTTCATTTTGATGGTTATTTAAGTT 370
Sbjct 1 -------------------------------------------------------------------------- 0
Query 371 GCTATGATTTTTGGACCAATGCTGGTTCCCCTGACATTCATCCAGTAGGATGGTGTGAAAAGACCAAACATGAA 444
Sbjct 1 -------------------------------------------------------------------------- 0
Query 445 CTGCACATCCCTAAGGGTTATAGAAAAGATAAATTTGTTTGGATGGATTACTTGAAGGCCTGCAAATTGCAAAA 518
Sbjct 1 -------------------------------------------------------------------------- 0
Query 519 TGCTCCAAAGAAATTATTCAGAAACAGAAGTCCTAATGGGCCAATGTCTAAAGAATTTCAGGTTGGAATGAAGC 592
Sbjct 1 -------------------------------------------------------------------------- 0
Query 593 TGGAGGCCGTGGACAGGAAGAACCCTTCCTTGGTGTGTGTGGCGACCATAGCAGATATTGTTGAAGATCGCTTA 666
Sbjct 1 -------------------------------------------------------------------------- 0
Query 667 CTAGTGCATTTTGACAACTGGGATGATAGTTACGATTACTGGTGCGATGTTAATAGCCCTTATGTCCAGCCAGT 740
Sbjct 1 -------------------------------------------------------------------------- 0
Query 741 TGGTTGGTGTCAGGAGAATGGAAGAACTCTGATAGCACCCCAAGGTTATCCCAATCCAGAAAATTTTTCCTGGA 814
Sbjct 1 -------------------------------------------------------------------------- 0
Query 815 CAGAATACCTGGAAGCTACTCAAACCAATGCAGTTCCTGCCAAAGTTTTTAAAATGAGGTTGCCTCATGGTTTT 888
|||||||||||||||||||||
Sbjct 1 -----------------------------------------------------ATGAGGTTGCCTCATGGTTTT 21
Query 889 CTGCCAAATATGAAACTTGAAGTTGTGGATAAACGGAACCCCAGGTTAATTCGTGTTGCTACGATTGTAGATGT 962
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 22 CTGCCAAATATGAAACTTGAAGTTGTGGATAAACGGAACCCCAGGTTAATTCGTGTTGCTACGATTGTAGATGT 95
Query 963 TGATGACCAAAGAGTAAAGGTTCATTTTGATGGTTGGGACCATAAGTATGACTACTGGGTGGAGGCAGACAGCC 1036
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 96 TGATGACCAAAGAGTAAAGGTTCATTTTGATGGTTGGGACCATAAGTATGACTACTGGGTGGAGGCAGACAGCC 169
Query 1037 CTGATATCCACCCGATCGGATGGTGTGATGTCACAGGGCATCCACTGGAAGTGCCACAGCGAACGAATGACCTG 1110
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 170 CTGATATCCACCCGATCGGATGGTGTGATGTCACAGGGCATCCACTGGAAGTGCCACAGCGAACGAATGACCTG 243
Query 1111 AAGATCCTTCCAGGTCAAGCTGTCTGTCCTACTCCCGGGTGCCGAGGAATAGGCCATATCCGTGGTCCACGTTA 1184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 244 AAGATCCTTCCAGGTCAAGCTGTCTGTCCTACTCCCGGGTGCCGAGGAATAGGCCATATCCGTGGTCCACGTTA 317
Query 1185 TTCGGGACATCACAGTGCTTTTGGCTGCCCGTATTCAGACATGAACTTGAAAAAGGAGGCAACACTTCACGATC 1258
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 318 TTCGGGACATCACAGTGCTTTTGGCTGCCCGTATTCAGACATGAACTTGAAAAAGGAGGCAACACTTCACGATC 391
Query 1259 GTTTGAGAGAACAAACACAGGCAAATTTGGAATCAGACTCTTCACATTCAAAATCAAAAAGCCTCTGTAGTTTG 1332
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 392 GTTTGAGAGAACAAACACAGGCAAATTTGGAATCAGACTCTTCACATTCAAAATCAAAAAGCCTCTGTAGTTTG 465
Query 1333 AACTTCAATGGAAAACATGAAAAGGTGAACAGTCAGCCCAGACTTGTACAGCAGGCAAAGTGTTTGAAAATCAA 1406
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 466 AACTTCAATGGAAAACATGAAAAGGTGAACAGTCAGCCCAGACTTGTACAGCAGGCAAAGTGTTTGAAAATCAA 539
Query 1407 AGGAAAAGAAGATATTGACTTGGATAATCTCTTCAGAGGCCGAGTGCGGTGGCTCATGCCTGTAATCCCAGCAC 1480
||||||||||||||||||||||||||||||||||||||..|..|||| ||| |||||||...
Sbjct 540 AGGAAAAGAAGATATTGACTTGGATAATCTCTTCAGAGTGCTTGTGC---------TGC-----ATCCCAGAGG 599
Query 1481 TTTGGGA-----GGCCGAGGCAGGCAGA---------TCACGAGATCAGGAGATCAAGACCATCCTG---GCCA 1537
|||||.| ||..|| ||||||..| ||||.|| ||| |.|..||.|.|||...|| |||.
Sbjct 600 TTTGGAATACTCGGTGGA-GCAGGCGCAGCAGGTGCTTCACCAG-TCA-GTGTCCATGTCCACGGTGTCAGCCC 670
Query 1538 ACGCAGT--GAAAC---CCCGTCTC------TACCAAAAATACAAAAAATTAG------CCAGGCGTGGTGG-- 1592
||.|..| |..|| ||| ||| .|.|||.|.|.|| || ||||||||||..|
Sbjct 671 ACCCTTTTCGGGACCTTCCC--CTCGGCAGGGAGCAACACTGCA-------AGTTGCTTCCAGGCGTGGCTGAC 735
Query 1593 ---CGGGC--GCCTA----------------------------------------------------------- 1602
||||| |||.|
Sbjct 736 ATCCGGGCCAGCCAAGTGGCACGTTGGACTGTGGATGAGGTGGCTGAGTTTGTACAGTCTCTTCTGGGCTGTGA 809
Query 1603 -------------------------------------------------------------------------- 1602
Sbjct 810 AGAGCATGCCAAGTGCTTTAAGAAAGAGGAATCATCTGAGCCAGGCTGTGTCAATCAGAGACGCTGCAGTAGTC 883
Query 1603 -------------------------------------------------------------------------- 1602
Sbjct 884 CCTGGAGTTGTGCTGAGGTCACTGGGGCATCCAGAAGCTGGGGAAAGCAGCCTACACGGTGGCCACTGCCATCC 957
Query 1603 -------------------------------------------------------------------------- 1602
Sbjct 958 TCAGATCGATGGCAAAGCCTTCCTGCTTCTGACACAGACGGACATTGTCAAAGTGATGAAGATCAAACTGGGCC 1031
Query 1603 ------------------------------------------------------- 1602
Sbjct 1032 CAGCACTGAAGATTTACAACTCTATCCTGATGTTCAGGCATTCCCAGGAACTCCC 1086
