Nucleotide Global Alignment
Description
- Query:
- TRCN0000465475
- Subject:
- XR_001754270.1
- Aligned Length:
- 3855
- Identities:
- 300
- Gaps:
- 3545
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 TGTTTATTGATTGGAATTCTGCTGTAAGAAGAGCTGTTCCTTCGCCGATGATTGATGGATGGGTTTCTGTATGG 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 ACTTACAGCATAAAGTTCTGCTCCTCGGGAGTAAATCTGCGAATCAGAGCCTTCCTCAGGAAGATAGCTCTACA 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 GATGACCCAGGGGAACAAGTACAAGCCGTGCATTCCAGCACCCAGGATTTCTTGTTTCATGTCATTTTAAAGAA 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 CTCATGGTTTCAGCTCCACGGGGCACATGGCATCTCCCTCTGCTCATCATAGTGTTTGGATCAAACAAATGAAA 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 AACAGAAACATGACGGCCTCTACCAGCAAAAGCTCGAGGGTTGGAAAGAGTCCCCTGGCAGGGAATTGGCACCC 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 CGTCGTGCCTATCCTCTCTCTCTGACTGCCTGCTGGAAATGCCCCCATCTCCCTTTGAGTCCTCCTCCCGGGCG 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 ACTCCTGTGACCTGTAACCTCTGTCCTGAAATCATCACAATGGCCAGGGTGGCCTCAGCTCAGGGCCTCTGTGA 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 CATCACCAAGGGCCTGGCACCAGGTGCCCAGTCTTCCAGTTGCGAGGGCAAGCAAACCCGTCATGAGCAACTCC 592
Query 1 --------------------ATGTGGACGCTGAAATCGTCCCTGGTCCTGCTTCTGTGCCTCACCTGCAGCTAT 54
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 593 CTTCCCCATCTCTGCTCACCATGTGGACGCTGAAATCGTCCCTGGTCCTGCTTCTGTGCCTCACCTGCAGCTAT 666
Query 55 GCCTTTATGTTCTCTTCTCTGAGACAGAAAACTAGCGAACCCCAGGGGAAGGTGCCGTGTGGAGAGCACTTTCG 128
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 667 GCCTTTATGTTCTCTTCTCTGAGACAGAAAACTAGCGAACCCCAGGGGAAGGTGCCGTGTGGAGAGCACTTTCG 740
Query 129 GATTCGGCAGAACCTACCAGAGCACACCCAAGGCTGGCTTGGGAGCAAATGGCTCTGGCTTTTGTTTGCTGTTG 202
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 741 GATTCGGCAGAACCTACCAGAGCACACCCAAGGCTGGCTTGGGAGCAAATGGCTCTGGCTTTTGTTTGCTGTTG 814
Query 203 TGCCGTTTGTGATACTGAAGTGTCAAAGAGACAGTGAGAAGAATAAGGTAAG-------------------GAT 257
|||||||||||||||||.|||||||||||||||||||||||||||||| || ||
Sbjct 815 TGCCGTTTGTGATACTGCAGTGTCAAAGAGACAGTGAGAAGAATAAGG--AGCAGAGTCCTCCTGGCCTTCGA- 885
Query 258 GGCT--CCATTT--------------------------------TTTTTACACCATATTG---ATTCAAT--CT 292
|||| |||||| |.|||||| .|.|.|| ||||||| ||
Sbjct 886 GGCTTCCCATTTCGCACTCCACTAAAGAAAAATCAAAATGCTTCTCTTTACA-AAGACTGTGTATTCAATACCT 958
Query 293 CA---------GGAGTCTCAGG-------GAAA-------CGGATGTTC------------------------- 318
.| |.||| || |||| |.||.||.|
Sbjct 959 TAAACGAACTTGAAGT----GGAGCTTTTGAAATTTGTGTCCGAAGTGCAGAATCTTAAAGGTGCCATGGCAAC 1028
Query 319 -------------------------------------------------------------------------- 318
Sbjct 1029 AGGCAGTGGCAGTAACCTCAAGCTTCGAAGGTCAGAGATGCCTGCAGATCCATACCATGTCACAATCTGTAAAA 1102
Query 319 -------------------------------------------------------------------------- 318
Sbjct 1103 TATGGGGAGAAGAAAGCTCTAGCTGAATGGATTTGTGTGTCAGGAGAGAAAAAAAAGAAAAAGTGAATGGGAGA 1176
Query 319 -------------------------------------------------------------------------- 318
Sbjct 1177 CCAGTAGCCATAGCAGTGATGGTTTTGTTTTTGCCTCTCTCATGTCATCTAGAGCTGTGGATGGTGAGGAGAGC 1250
Query 319 -------------------------------------------------------------------------- 318
Sbjct 1251 ACCGAAAGCTACATAATAGTTCACAGGAAGTTGCAAAGGTGGCACTGAGAGGTCCCGTGTGCTCTTCACCCAGT 1324
Query 319 -------------------------------------------------------------------------- 318
Sbjct 1325 TTCCTCCTGTGGTTGCGTCTTAGTTGTACAGAACTTCATTGTGTGAACGTGCCATAGTTTACACAGCTGTGCTC 1398
Query 319 -------------------------------------------------------------------------- 318
Sbjct 1399 TCAGATATGAACACGCAGGGAGCATCCAAACATTTGAAATGACAAACAACAGTGCAGGGCCTAACCTTGTGCCT 1472
Query 319 -------------------------------------------------------------------------- 318
Sbjct 1473 GTGTATTTTGGTATTGCTGAAGCTGTAATTTCAGGGTAGATACCTAGAAGAGTGATCGTAGGTTAGAAAGGTAA 1546
Query 319 -------------------------------------------------------------------------- 318
Sbjct 1547 GTGCATATGCAGTTGTGTTAGGTATTGCCAAATTTCCCTTTAAAAGGATTGTGCCAATTTGTATTCTCACAAGA 1620
Query 319 -------------------------------------------------------------------------- 318
Sbjct 1621 GATGCTAGTACAAGTGTTGAGACTGATGTGTGGCTAGATGGCTGGAGAGCTGGCTGACATCTCACCCCGCAGCA 1694
Query 319 -------------------------------------------------------------------------- 318
Sbjct 1695 TCAATGTTAGAACCGGTGCTTACGCGGCTTGCAGTTACTAGAGAGAGCCACTAGATGGCAGATACAGCCCATCA 1768
Query 319 -------------------------------------------------------------------------- 318
Sbjct 1769 CAGACAACAGTGAGCACACCTTTTTCCAGATTTTGCTTCAGGGGCCTTTGATAACAATTGTGTAAGTTGAAGTA 1842
Query 319 -------------------------------------------------------------------------- 318
Sbjct 1843 ATAGAATGTTTCTAAATGACTAATAGCACAACAACTAGCTGTTTTGTAGGTTGTTTTTTGTTTTTTTGAGACAG 1916
Query 319 -------------------------------------------------------------------------- 318
Sbjct 1917 TCTCGCTCTCTTGTGCAGGCTGGAGTGCAGTAGCTTGATCTTGGCTCACTGCAGCCTCTACCTAACCTCCGAGT 1990
Query 319 -------------------------------------------------------------------------- 318
Sbjct 1991 CCAAGTGATCCTCCTGCCTCAGCCTCCCGAGTAGCTGGACTACAGGCACATGCCACCATGCCCAGCTAATTTTA 2064
Query 319 -------------------------------------------------------------------------- 318
Sbjct 2065 TTAATTTTTTGTAGAGACAGGGTTTCACTATGTTGCCCAGGCTGGTCTCAAACTCCTGGCCTCAAGTGATCCTC 2138
Query 319 -------------------------------------------------------------------------- 318
Sbjct 2139 CTGTCTCGGCCTCCCAAAGTGCTGGGATTACAGGCATGAGCCACCACTCAGGCCACAACTAGCATTTGTAATAC 2212
Query 319 -------------------------------------------------------------------------- 318
Sbjct 2213 TAGTAGGAACAGTAACATTATTTTTATTAGCAAGTAACATTTTTCATTTGATTATTCATTCATACAGTAAGTGT 2286
Query 319 -------------------------------------------------------------------------- 318
Sbjct 2287 ATATTTGTTCTATGTGCTGTTATAGGCACTGGGATGAAGAGATTTAAAAACAAACACAACCATCAGCCTGCATA 2360
Query 319 -------------------------------------------------------------------------- 318
Sbjct 2361 GAGCTTTCATTCTCCTGGGGGAGAGAGACAGTAAGGAAATACAAAAGCCAAATACATAGTCTATTGGGGAGCGT 2434
Query 319 -------------------------------------------------------------------------- 318
Sbjct 2435 AGGTGCTATGGAGAAAGCACAGAAGGGGAATAGGGTGTGTGTGCGTGCCTGTGTGCACATATATGTGCATGCGT 2508
Query 319 -------------------------------------------------------------------------- 318
Sbjct 2509 GCATGTGTGTGTGTGTGTGTGTGTGTATGTGGTGAGCAGGGTAGTTAGTTTACAACCTTAAACAATGTGATCAG 2582
Query 319 -------------------------------------------------------------------------- 318
Sbjct 2583 GGAAGGGCTCACTGAGAAGCAGCTGACTGAGAGAGGAAGCTGTAAGGACAAGCTGGGAGGGGAGGGTGTACGGC 2656
Query 319 -------------------------------------------------------------------------- 318
Sbjct 2657 AGGAGGAATGGGCCAGCAGAGAGCCCGCAGCAGGAGCAGCCTGGCATGATGGAGGTGCCAGTGCAGGGAGAGAA 2730
Query 319 -------------------------------------------------------------------------- 318
Sbjct 2731 GGCGCGAGCAGCGTTGGAGCGGGGTGTGGACCTTGGAGACCCTGTAGGCTACTGAAAGGACTTTGGATTTGTCC 2804
Query 319 -------------------------------------------------------------------------- 318
Sbjct 2805 CCGTGAGAAAGGAGAGCCATGGGAGAGTAAATCAAATCCCTCAGAAGCCCAGAAAGCAGCTGTCCTCAGCTCAC 2878
Query 319 -------------------------------------------------------------------------- 318
Sbjct 2879 TCCTCTCACCGCAGATCACCCATTCACCAGATCCCAGGTACCGAACTGAAGATGGTAGAGGAAAAGTTTTTCCT 2952
Query 319 -------------------------------------------------------------------------- 318
Sbjct 2953 GCTTAACATATTCAACTCTCTACCCTCAATATATTTGGCTGTTATTATTCTGGTTTACATGTATCATAATTTAA 3026
Query 319 -------------------------------------------------------------------------- 318
Sbjct 3027 CCAGTTCCCTACTGGTGGATGTCTAGGTTTCCCCGATGTTTTGCTATTAAAAACACACATGGTACACGTTTTTC 3100
Query 319 -------------------------------------------------------------------------- 318
Sbjct 3101 TAGATCGGGCAGGGTTTGCCCATCTCCACTTCAAGCAGCACAACCACCATCTGCCAGTGTTGGGGTTTACTCTA 3174
Query 319 -------------------------------------------------------------------------- 318
Sbjct 3175 CAGTCAGCAAACACTGTTGGCACATCCAGTCAGAGAAACTGAAAACAGAAAGCAGAAATGGCTTACACTGGACT 3248
Query 319 -------------------------------------------------------------------------- 318
Sbjct 3249 AATTTTAGAATTTCTAAGTACATTTAAGTGATGACTCATCCCACTTAAATTCAAAGCTGTTTGTTGTGCCATCT 3322
Query 319 -------------------------------------------------------------------------- 318
Sbjct 3323 GGCTCATCAGAACATGAAAGACTTCTCCTGCAACCTGGAAAAAGGCCAGAGAGGAAGACGAATGGAGGAGTCAA 3396
Query 319 -------------------------------------------------------------------------- 318
Sbjct 3397 CCCCATGGGAATGCTGACTGAGTGTTAGCTCCCCGTGGACAGGAATGTCACTGCATGAATAGGCTGCAGTATGT 3470
Query 319 -------------------------------------------------------------------------- 318
Sbjct 3471 CTGGGCCTGTTTTTTTTTCATAAAATGTTCCCCCCCTGTTTTTTTCTTATTCCAAAGCAATGCAACAAAAAGCA 3544
Query 319 -------------------------------------------------------------------------- 318
Sbjct 3545 CAAGAAATCAAAAAGGAAAAAATAGATATTGGACTTCATCAAAATGAAAAACTTTTGTGCTTCAAAGGAAATGG 3618
Query 319 -------------------------------------------------------------------------- 318
Sbjct 3619 AAAGAAAGTGAAAAAACAACTGAGGGAATGGAAGAAAATATTCTCAAATCATCATCTAACAAAGGTTGTGTTAG 3692
Query 319 -------------------------------------------------------------------------- 318
Sbjct 3693 TCTGTTCAGGTTGCTGTAACAAAATATCATTTCAGGTCACCAGGTGGCTTAAACAACAGATTCAGTTGGCCCTC 3766
Query 319 -------------------------------------------------------------------------- 318
Sbjct 3767 CGTATCCATGGGTTTCAGGCCTTCGACTTCAACCAACCTCAAATAAAAAATATTTTTAAAACCCAATACGGCCG 3840
Query 319 ------- 318
Sbjct 3841 AGTGCGG 3847
