Nucleotide Global Alignment
Description
- Query:
- TRCN0000465548
- Subject:
- NR_135246.2
- Aligned Length:
- 4237
- Identities:
- 519
- Gaps:
- 3718
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 GCGGGAAGTGGAACCTGGCTCTGGGGAGAAGCCGCGTGAGATCCGCGCGGGTGCTAGCTAGTCCTTTCTCGTCG 74
Query 1 -----------------------------------------------ATGCCCATGAAGGGCCGCTTCCCCATC 27
|||||||||||||||||||||||||||
Sbjct 75 CTGCTCGGCTCGCGGCCCGTGGGGTCGGCCCCGCCACCGTTGCCGCCATGCCCATGAAGGGCCGCTTCCCCATC 148
Query 28 CGCCGCACCCTGCAATATCTGAGCCAGGGGAACGTGGTGTTCAAGGACTCCGTGAAGGTCATGACAGTGAATTA 101
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 149 CGCCGCACCCTGCAATATCTGAGCCAGGGGAACGTGGTGTTCAAGGACTCCGTGAAGGTCATGACAGTGAATTA 222
Query 102 CAACACGCATGGGGAGCTGGGCGAGGGCGCCAGGAAGTTTGTGTTTTTCAACATACCTCAGATTCAATACAAAA 175
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 223 CAACACGCATGGGGAGCTGGGCGAGGGCGCCAGGAAGTTTGTGTTTTTCAACATACCTCAGATTCAATACAAAA 296
Query 176 ACCCTTGGGTGCAGATCATGATGTTTAAGAACATGACGCCGTCACCCTTCCTGCGATTCTACTTAGATTCTGGG 249
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 297 ACCCTTGGGTGCAGATCATGATGTTTAAGAACATGACGCCGTCACCCTTCCTGCGATTCTACTTAGATTCTGGG 370
Query 250 GAGCAGGTCCTGGTGGATGTGGAGACCAAGAGCAATAAGGAGATCATGGAGCACATCAGAAAAATCTTGGGGAA 323
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 GAGCAGGTCCTGGTGGATGTGGAGACCAAGAGCAATAAGGAGATCATGGAGCACATCAGAAAAATCTTGGGGAA 444
Query 324 GAATGA-------------------------------------------------------------------- 329
||||||
Sbjct 445 GAATGAGTGAGTTGTTTGGTTTGACCTGGAAGGAACAAACTTCTCAGCCCAGAGAATTTGAGGAAGAAAGGGGT 518
Query 330 ---------------------GGAAACCCTCAGGGAAGAGGAGGAGGAGAAAAAGCAGCTTTCTCACCCAGCCA 382
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 GTGTGGGAAGGGTGTTGAGAGGGAAACCCTCAGGGAAGAGGAGGAGGAGAAAAAGCAGCTTTCTCACCCAGCCA 592
Query 383 ACTTCGGCCCTCGAAAGTACTGCCTGCGGGAGTGCATCTGTGAAGTGGAAGGGCAGGTGCCCTGCCCCAGCCTG 456
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 593 ACTTCGGCCCTCGAAAGTACTGCCTGCGGGAGTGCATCTGTGAAGTGGAAGGGCAGGTGCCCTGCCCCAGCCTG 666
Query 457 GTGCCATTACCCAAGGAGATGAGGGGGAAGTACAAAGCCGCTCTGAAAGCCGATGCCCAGGAC----------- 519
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 667 GTGCCATTACCCAAGGAGATGAGGGGGAAGTACAAAGCCGCTCTGAAAGCCGATGCCCAGGACTAAGGCCCACG 740
Query 520 -------------------------------------------------------------------------- 519
Sbjct 741 GTCACTGTGGGCTGGGGTGATGGTGTCTGACCAGTGGGGAGATTGGAATGGGATTACTTTGGCCCAGGGAAGCC 814
Query 520 -------------------------------------------------------------------------- 519
Sbjct 815 CCTGGTTCTGTCCCTGGAGACTCTGGAAATCCTTTTGCATTAAAAGGACTTTACACACCTGTGTAAAAGGATGT 888
Query 520 -------------------------------------------------------------------------- 519
Sbjct 889 GGGAGAGGAGGGTCTGAAGCTGAGCTGCTAAATGAATATCCCTGCTCTGCTGGTCAATAAAACGCTTCCTAATA 962
Query 520 -------------------------------------------------------------------------- 519
Sbjct 963 GCAGCTTGGCGTGTATCTGGTCCTAGTGAAGAGGAAGGCCTGTGTAGCAGAAAGGCTTTGGGCCTGAGAGGTTA 1036
Query 520 -------------------------------------------------------------------------- 519
Sbjct 1037 AGGCCACAGCCTGTTGACACCTGTTTTGGTCCTGCGACCCTTTACTGGTCTCCGCTGGCTTTGAATCTTCCTCT 1110
Query 520 -------------------------------------------------------------------------- 519
Sbjct 1111 GGGCTCTACTCTGGAGAACATAAGGGCTGCTGTGGTTGAGTCTGGCTAGCACTGTCTGTGGTTGGCAGTGTGTA 1184
Query 520 -------------------------------------------------------------------------- 519
Sbjct 1185 CACCCCTCCGTTCAGTTCCTTGGGGGTATTTTTCAGAAATCCAAAGGCAACCCTTCGTGCAGTGCTCACTTTTT 1258
Query 520 -------------------------------------------------------------------------- 519
Sbjct 1259 TAAGTACAGTTGATTACCCTTGCCTGCTGGGGGGCCTAGCCATGGGCCAGAGATGGAGGAGCCCCAGTGGCTGA 1332
Query 520 -------------------------------------------------------------------------- 519
Sbjct 1333 CAGGCCAGCCTCACTCAGGCACGTACCTGCTGACCAGTCAGCCACTGCCAACCCATGGCCCAGCCACTGTGTGC 1406
Query 520 -------------------------------------------------------------------------- 519
Sbjct 1407 ATTAGCAGGGAGGTTTGTAGGCCATGGAGGAAATGAGGAGACACCACCTAGTGGAGACATTGGGGCCCTGCTGG 1480
Query 520 -------------------------------------------------------------------------- 519
Sbjct 1481 GGGGATGGTGTCTATAGCTGGCTCTGCTGGCTCCCTCAGGCCCTGCTTACCAAGCTCTGGAGGAGGGAGTGCTG 1554
Query 520 -------------------------------------------------------------------------- 519
Sbjct 1555 CATTACTGAGCACCTTCCTTGTTCTTTCCTCATAGGACACTGATGTTACTGTCACTTTAGTTATGCTAAAGTGG 1628
Query 520 -------------------------------------------------------------------------- 519
Sbjct 1629 AGGTTTCAGCCTCCAGAAGACAGCAGAGCCTTCTAGGGTCACCTTAAGAATAGGTTTAGCTAGGCTGGGTGTGG 1702
Query 520 -------------------------------------------------------------------------- 519
Sbjct 1703 TGGCTCATGCCTGTAATCCCAGCACTTTGGGAGGCTGATGTGGGCGGATAGTTGAGCCCAGGAGTTCGAGACCA 1776
Query 520 -------------------------------------------------------------------------- 519
Sbjct 1777 GCCTGGGCAACATGGCAAGACCTTGTCTCTACAAAAAGTACAAAAATTAGATGGGTGTGGTGTTTCGCGTCTGT 1850
Query 520 -------------------------------------------------------------------------- 519
Sbjct 1851 AGTCCCAGCTATTTGGGAAGCTGAGGTGGGAGGATCTCGAGCCTGCGAGATCAAGGCTGCAGTGAATCATGATC 1924
Query 520 -------------------------------------------------------------------------- 519
Sbjct 1925 GTGCGCTACTGCACTCCAGCCTGGGCCACAGAGCAAGACTGTCTCAAGAAAAAAAATTTTTTAAATAAGTTTAA 1998
Query 520 -------------------------------------------------------------------------- 519
Sbjct 1999 TTATAAAGTGAAGGACCAGTTGGACCACGGACCCCTAGAAACTCAGCCAAGGAGACCTGACTTTATCTGAGACA 2072
Query 520 -------------------------------------------------------------------------- 519
Sbjct 2073 GGAAGGCAGTGGTTAAAAGAATTAAAAAAGGACAGTGGTGCTTGACAGAGCAGGACTGAAGTTTTCATTCCTCT 2146
Query 520 -------------------------------------------------------------------------- 519
Sbjct 2147 ACCTGCTGGGGCCTTGGTCAAGTCCTAAAAGCTTTCCAGGTCTGTAACTGGTTTTGTCTGTAAAATGGGGAAAA 2220
Query 520 -------------------------------------------------------------------------- 519
Sbjct 2221 GGTTACCTTTTCTGCCACATGAAGTAGCTGGCTGGTGAAATGATGTCATACTACGATGTGTTTCATTAACTGTT 2294
Query 520 -------------------------------------------------------------------------- 519
Sbjct 2295 GGAGATTATCACATTAAATTGAGCAGATTTGGATCTTTTACATTTGATGCTCAAGTTTGATTCTGTACCAGATC 2368
Query 520 -------------------------------------------------------------------------- 519
Sbjct 2369 TGGGTTTGGGGTGATGGCTTGTCGGGGGTGGGAGGGGAAGGTGGGCAGAGACTGATGTATAATGGACAGGTGTT 2442
Query 520 -------------------------------------------------------------------------- 519
Sbjct 2443 CCTTGAGTGACAGACTTACAAAGGGAGTGTTTAATTGAAATCTAGCATCTTGTCTCTCTGCTATCAGCATTTTG 2516
Query 520 -------------------------------------------------------------------------- 519
Sbjct 2517 GCTGGGTGGAAAAAGCTCTCCTCCACAGAGAGCCCTCCCATGTCTGCTGGTTTCAGTTCCCCACCCAACTGACT 2590
Query 520 -------------------------------------------------------------------------- 519
Sbjct 2591 GAAGTCTTGACCTTGATACCACCTGCCTGGGCGTTCTACTTGGCTGCAAGGGCTCTTCAGAAAGCACCTAGTTC 2664
Query 520 -------------------------------------------------------------------------- 519
Sbjct 2665 CTTTTGGCTTTCATCTGCAGTGTAGGTCTCCATAGCTAGTGACACACAAAGCCTTATGAGAGTATTCCTTCCCT 2738
Query 520 -------------------------------------------------------------------------- 519
Sbjct 2739 CTAGGGCCCAAAGAGGCTGCTAACCAGCAGGAATGTCCTGAACCAAAAGGAGTGGTGACCATTCTCTAGACAGA 2812
Query 520 -------------------------------------------------------------------------- 519
Sbjct 2813 ATAAATGTCTGGTCCCTAATGGGACAGATAACTAGGGTTTGAGTTCAGGCTTGACACAGGAGCAATGGGCAGTG 2886
Query 520 -------------------------------------------------------------------------- 519
Sbjct 2887 AGGTGGACAGCCCAGACCCTGAAAGGACGTGTGGAGACAGCAGCAGTCCTGTGGTGCAGTTACTGCCTGTGTGG 2960
Query 520 -------------------------------------------------------------------------- 519
Sbjct 2961 CCAGCTTCACAGGCAGCAGATAATTTGTGGAAATAAACATTATTTTCTTTTTTTGTTCCCTGTAGGCTACTTGA 3034
Query 520 -------------------------------------------------------------------------- 519
Sbjct 3035 TCCTGGATAGTTTCTCTTTAAACCTTTGTCTTTCCCTATTTTGTTTAGTAGTGATGAAAGATGGGTTTAAAATA 3108
Query 520 -------------------------------------------------------------------------- 519
Sbjct 3109 TACAGAAATGGGAGAAAATTAATTAGAGAAAATGTGAGGATTTTATAATTGATAACATGTTCTTAATTTTACTT 3182
Query 520 -------------------------------------------------------------------------- 519
Sbjct 3183 GCACAAGCAGTGTTCACAGCCTTATTCTGAAGTGACCACTTTTCTTCTCTTTGAGGCACTACCTGGCAGCACCA 3256
Query 520 -------------------------------------------------------------------------- 519
Sbjct 3257 TCTAAACCTGTATCATCTGCTGTGGTCCCAGTTACTCAGGAGGCTGAGGCAGGAGGATCACTTGAGCCCAGGAG 3330
Query 520 -------------------------------------------------------------------------- 519
Sbjct 3331 GTTGAGGCTGGAGTGAGCCATGACTGTACCACTGCATTCCAGCCTGGGTGACGGAGTGAGGCCCTATCTGCCTG 3404
Query 520 -------------------------------------------------------------------------- 519
Sbjct 3405 CCAGTGAGTTCTGTCATGCATCAGACTTTGGACCTCAGAATTTTCACCTGGAACATGAGAGGTGTGTGGTTTGC 3478
Query 520 -------------------------------------------------------------------------- 519
Sbjct 3479 GCTATAGACTGGCTCCGGTGATCTGGCCATTATACTCTGCTGTCTCCATCTTGAGGATGTAGGGGATTATGCTG 3552
Query 520 -------------------------------------------------------------------------- 519
Sbjct 3553 TCTATCGAAACATTGCCAATGAGACCAGTAAAAAAAAGTTCTTCTGTTATGTTGGAGCTCATCAGCCTGAGTGC 3626
Query 520 -------------------------------------------------------------------------- 519
Sbjct 3627 CGGCAGGCGAACGAGGATCCGGGCCAATCTATAAAAGGGAGTGTCATTAGAAAAGGAGACTGTTTGATGCCCTT 3700
Query 520 -------------------------------------------------------------------------- 519
Sbjct 3701 CAACCACAGCTCAGCAAAGGCTCCTGGGGTCCCGTCTGTATTGCACAGAATCAAACCAAACGGATCCACCATCC 3774
Query 520 -------------------------------------------------------------------------- 519
Sbjct 3775 ACCCACCTCTCTTTTCTGATTTCAACAGTTCCTCTTATAGAAATTTATCATGAGAAAAAACCAAATGAGTACAA 3848
Query 520 -------------------------------------------------------------------------- 519
Sbjct 3849 AATGTATGTACAGATGTGTTCCCTTCACTCTTGTTTATTCCAACTCTCCTCACCCCCACCACCAAGAGAAAACC 3922
Query 520 -------------------------------------------------------------------------- 519
Sbjct 3923 TGGAAATTCATCAACAGAGGACAGACTAAAGTAGGAGTCTTCATATGATGAACTGCTAGAGACTCATTTAAAAA 3996
Query 520 -------------------------------------------------------------------------- 519
Sbjct 3997 ACGATAATACAAACCTGTATTTACTGACCAGGAAAGACATCCATGACATATTGCTCAATAAAAGTTTAAAAGGA 4070
Query 520 -------------------------------------------------------------------------- 519
Sbjct 4071 GATTATAAAACAGCAAGTATAGATGTGTATATAAAGTATTGGGAAAATGTTCACCACGCTAACAGTTGGGCTCT 4144
Query 520 -------------------------------------------------------------------------- 519
Sbjct 4145 GGGTATTGGGATTTGAGGTGATTTTTTCTTATTTTTTGTACTGCTCTAATTTCCAGTGTTCATTTAGCATTATA 4218
Query 520 ------------------- 519
Sbjct 4219 AATAAAGCAGTAAAATAGC 4237
