Nucleotide Global Alignment

Description

Query:
TRCN0000465550
Subject:
NM_001326.3
Aligned Length:
2157
Identities:
286
Gaps:
1855

Alignment

Query    1  ATGTCAGGAGA-GGAGCCACGGAGCAGGCAGCTGAGTATGTCCCAGAGAAGGTGAAGAAAGCGGAAAAGAAATT  73
            ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct    1  ATGTCAGGAGACGGAGCCACGGAGCAGGCAGCTGAGTATGTCCCAGAGAAGGTGAAGAAAGCGGAAAAGAAATT  74

Query   74  AGAAGAGAATCCATATGACCTTGATGCTTGGAGCATTCTCATTCGAGAGGCACAGAATCAACCTATAGACAAAG  147
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct   75  AGAAGAGAATCCATATGACCTTGATGCTTGGAGCATTCTCATTCGAGAGGCACAGAATCAACCTATAGACAAAG  148

Query  148  CACGGAAGACTTATGAACGCCTTGTTGCCCAGTTCCCCAGTTCTGGCAGATTCTGGAAACTGTACATTGAAGCA  221
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  149  CACGGAAGACTTATGAACGCCTTGTTGCCCAGTTCCCCAGTTCTGGCAGATTCTGGAAACTGTACATTGAAGCA  222

Query  222  GAGGTTA---CT--ATTTTAT-------TT-------TATTT------TTTCTTATATCAGTATTGCAGCATTC  270
            |||.|||   ||  |..||||       ||       |||||      |..|||||....||.||||| ||||.
Sbjct  223  GAGATTAAAGCTAAAAATTATGACAAGGTTGAAAAGCTATTTCAGAGATGCCTTATGAAGGTTTTGCA-CATTG  295

Query  271  ACT----GTAGTGAT----------------AGAAAACAAGTTAGG--AACATAGCCAAT--------------  308
            |.|    |.||||.|                |||||.||||   ||  ||| || ||||.              
Sbjct  296  ATTTATGGAAGTGTTATCTTTCATATGTCCGAGAAACCAAG---GGTAAAC-TA-CCAAGTTACAAAGAAAAAA  364

Query  309  --------------------------------------------------------------------------  308
                                                                                      
Sbjct  365  TGGCTCAAGCATATGACTTTGCACTGGATAAAATTGGAATGGAAATTATGTCCTATCAGATTTGGGTGGATTAC  438

Query  309  --------------------------------------------------------------------------  308
                                                                                      
Sbjct  439  ATCAATTTCCTAAAAGGCGTGGAAGCTGTAGGATCTTATGCAGAAAATCAAAGAATAACAGCTGTCCGAAGAGT  512

Query  309  --------------------------------------------------------------------------  308
                                                                                      
Sbjct  513  TTATCAACGAGGTTGTGTTAATCCGATGATCAACATTGAACAGCTCTGGAGAGACTATAACAAGTATGAAGAGG  586

Query  309  --------------------------------------------------------------------------  308
                                                                                      
Sbjct  587  GTATCAATATTCATTTAGCTAAAAAAATGATTGAAGATCGGAGTAGAGATTATATGAATGCTAGACGTGTAGCA  660

Query  309  --------------------------------------------------------------------------  308
                                                                                      
Sbjct  661  AAGGAATATGAGACAGTAATGAAAGGCTTGGACCGTAATGCTCCCTCGGTGCCTCCTCAGAATACTCCTCAAGA  734

Query  309  --------------------------------------------------------------------------  308
                                                                                      
Sbjct  735  AGCTCAACAAGTAGATATGTGGAAGAAATATATACAGTGGGAAAAGAGCAACCCTCTTCGTACAGAGGATCAGA  808

Query  309  --------------------------------------------------------------------------  308
                                                                                      
Sbjct  809  CCCTTATAACAAAAAGAGTTATGTTTGCTTATGAACAGTGCCTGCTTGTGCTGGGCCATCACCCTGATATTTGG  882

Query  309  --------------------------------------------------------------------------  308
                                                                                      
Sbjct  883  TATGAAGCTGCCCAGTATCTTGAGCAGTCAAGTAAACTGCTCGCAGAAAAGGGAGATATGAATAATGCCAAATT  956

Query  309  --------------------------------------------------------------------------  308
                                                                                      
Sbjct  957  ATTTAGTGATGAAGCTGCTAATATATATGAAAGAGCCATAAGCACTTTATTGAAGAAGAATATGCTTCTTTATT  1030

Query  309  --------------------------------------------------------------------------  308
                                                                                      
Sbjct 1031  TTGCATATGCAGATTATGAAGAGAGTCGCATGAAGTATGAAAAGGTTCACAGTATATATAACAGACTTCTGGCA  1104

Query  309  --------------------------------------------------------------------------  308
                                                                                      
Sbjct 1105  ATTGAGGATATTGACCCTACCTTGGTATATATCCAATATATGAAATTTGCACGGAGAGCAGAAGGCATCAAATC  1178

Query  309  --------------------------------------------------------------------------  308
                                                                                      
Sbjct 1179  TGGAAGAATGATATTTAAAAAAGCAAGAGAAGATACCAGAACCCGCCACCATGTCTATGTTACTGCAGCACTCA  1252

Query  309  --------------------------------------------------------------------------  308
                                                                                      
Sbjct 1253  TGGAATATTACTGTAGTAAGGACAAATCTGTTGCCTTTAAGATTTTTGAGCTGGGGCTAAAAAAATATGGAGAC  1326

Query  309  --------------------------------------------------------------------------  308
                                                                                      
Sbjct 1327  ATTCCAGAGTATGTCCTGGCCTATATTGACTATCTTTCTCACCTCAATGAGGACAATAATACCCGAGTTTTGTT  1400

Query  309  --------------------------------------------------------------------------  308
                                                                                      
Sbjct 1401  TGAACGAGTTTTAACATCTGGAAGCCTTCCTCCTGAGAAGTCTGGAGAAATCTGGGCCCGATTTCTAGCATTTG  1474

Query  309  --------------------------------------------------------------------------  308
                                                                                      
Sbjct 1475  AAAGTAATATTGGTGATCTAGCTAGTATACTCAAAGTGGAGAAAAGACGGTTTACAGCATTCAAAGAAGAGTAT  1548

Query  309  --------------------------------------------------------------------------  308
                                                                                      
Sbjct 1549  GAAGGGAAAGAAACGGCTTTACTAGTAGATAGATACAAGTTCATGGATTTATATCCTTGCTCTGCAAGTGAATT  1622

Query  309  --------------------------------------------------------------------------  308
                                                                                      
Sbjct 1623  AAAAGCACTTGGTTATAAGGATGTCTCCCGTGCTAAGCTAGCAGCTATAATTCCGGACCCAGTTGTAGCTCCTT  1696

Query  309  --------------------------------------------------------------------------  308
                                                                                      
Sbjct 1697  CTATAGTGCCTGTTCTGAAAGATGAAGTGGATAGAAAACCAGAATACCCTAAACCAGACACTCAGCAGATGATT  1770

Query  309  --------------------------------------------------------------------------  308
                                                                                      
Sbjct 1771  CCATTTCAGCCACGACATTTAGCACCTCCAGGTTTACACCCTGTACCTGGTGGAGTGTTCCCAGTCCCTCCTGC  1844

Query  309  --------------------------------------------------------------------------  308
                                                                                      
Sbjct 1845  AGCTGTTGTTTTAATGAAACTTCTCCCTCCTCCTATCTGTTTCCAGGGTCCTTTTGTACAAGTGGATGAACTGA  1918

Query  309  --------------------------------------------------------------------------  308
                                                                                      
Sbjct 1919  TGGAAATTTTCCGAAGATGCAAGATACCAAATACTGTTGAGGAAGCTGTGAGGATCATTACTGGTGGGGCCCCA  1992

Query  309  --------------------------------------------------------------------------  308
                                                                                      
Sbjct 1993  GAGCTAGCTGTAGAAGGCAACGGCCCCGTGGAAAGTAATGCAGTACTCACCAAGGCCGTCAAAAGGCCCAACGA  2066

Query  309  --------------------------------------------------------------------------  308
                                                                                      
Sbjct 2067  GGATTCAGATGAAGATGAAGAAAAGGGAGCCGTTGTCCCCCCTGTTCATGACATTTACAGAGCACGGCAGCAGA  2140

Query  309  -----------  308
                       
Sbjct 2141  AGCGGATTCGG  2151

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