Nucleotide Global Alignment
Description
- Query:
- TRCN0000465557
- Subject:
- NR_125333.1
- Aligned Length:
- 4391
- Identities:
- 731
- Gaps:
- 3660
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 GTTAAGGCATTCAGGGACTCTGACTGCGCAAGATGGAGTGTAGGCCGGCCGGCGAGACTGCACCTCCCAGCATG 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 CCTTGCAGCCAGGACTGGAGTCGGTACTTAAGAGTGATGGGGTTCCCTAGATACTTTAGGCCGTCGCATCGATT 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 ATAGAGATTGAGGTGGAACCCGGGGCCTGGGAACTGGACGCACGCGGAGGGCGAAGATGGAAGCCTGGCGCTGT 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 GTGAGGAAGGGCTACGGCCACTGTGTGGTGGGAAGAGGCCGGTGTGATAAAGCGGAATTGGGAATATATATGTA 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 GCCATGATAAAGAAAAAACGAAGATCCTAGGAGACAAAAATGTTGATCCCAAATGTGAAGACAGTGAGAACAAG 370
Query 1 ---------------ATGTCCTATAATATACTTTCACAAGATTTACTGGAAGATAACTCTCACCTTTATAGACA 59
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 TTTGACTTTTCAGTGATGTCCTATAATATACTTTCACAAGATTTACTGGAAGATAACTCTCACCTTTATAGACA 444
Query 60 TTGCCGGCGGCCAGTATTACACTGGAGTTTTAGGTTTCCCAATATTCTGAAAGAAATTAAACATTTTGATGCAG 133
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 TTGCCGGCGGCCAGTATTACACTGGAGTTTTAGGTTTCCCAATATTCTGAAAGAAATTAAACATTTTGATGCAG 518
Query 134 ACGTACTTTGTTTGCAAGAAGTTCAAGAAGATCATTATGGAGCAGAGATCAGGCCAAGTTTGGAATCACTGGGT 207
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 ACGTACTTTGTTTGCAAGAAGTTCAAGAAGATCATTATGGAGCAGAGATCAGGCCAAGTTTGGAATCACTGGGT 592
Query 208 TATCACTGTGAATATAAGATGCGGACAGGAAGGAAACCTGATGGCTGTGCTATTTGCTTCAAACATTCCAAATT 281
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 593 TATCACTGTGAATATAAGATGCGGACAGGAAGGAAACCTGATGGCTGTGCTATTTGCTTCAAACATTCCAAATT 666
Query 282 TTCACTCTTGTCAGTGAACCCAGTGGAATTCTTCCGCCCTGATATTTCTCTGTTGGACAGAGACAATGTTGGAT 355
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 667 TTCACTCTTGTCAGTGAACCCAGTGGAATTCTTCCGCCCTGATATTTCTCTGTTGGACAGAGACAATGTTGGAT 740
Query 356 TAGTTTTACTCTTACAGCCCAAAATTCCATATGCTGCCTGCCCTGCAATCTGCGTAGCAAATACGCATCTGTTG 429
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 741 TAGTTTTACTCTTACAGCCCAAAATTCCATATGCTGCCTGCCCTGCAATCTGCGTAGCAAATACGCATCTGTTG 814
Query 430 TATAATCCAAGGCGAGGTGATATTAAGCTGACGCAATTGGCAATGCTACTGGCAGAGATTTCCAGTGTTGCCCA 503
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 815 TATAATCCAAGGCGAGGTGATATTAAGCTGACGCAATTGGCAATGCTACTGGCAGAGATTTCCAGTGTTGCCCA 888
Query 504 CCAGAAAGATGGCAGCTTCTGCCCTATTGTTATGTGTGGTGACTTTAATTCTGTTCCTGGTTCTCCACTATATA 577
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 889 CCAGAAAGATGGCAGCTTCTGCCCTATTGTTATGTGTGGTGACTTTAATTCTGTTCCTGGTTCTCCACTATATA 962
Query 578 GTTTCATAAAGGAAGGAAAATTGAATTATGAAGGACTTCCCATAGGAAAGGTATCTGGCCAGGAACAGTCTTCA 651
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 963 GTTTCATAAAGGAAGGAAAATTGAATTATGAAGGACTTCCCATAGGAA-------------------------- 1010
Query 652 CGGGGACAAAGAATTTTATCTATTCCAATTTGGCCCCCAAACCTAGGTATCTCACAGAACTGTGTGTATGAGGT 725
Sbjct 1011 -------------------------------------------------------------------------- 1010
Query 726 ACAGCAGGTACCAAAAGTAGAAAAGACAGACAGTGATCTGACACAAACACAGCTGAAGCAAACAGAGGTCCTAG 799
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1011 ---------------------------AGACAGTGATCTGACACAAACACAGCTGAAGCAAACAGAGGTCCTAG 1057
Query 800 TGACAGCTGAAAAATTGTCTTCAAATTTACAGCACCATTTCAGTTTGTCATCTGTTTAT--------------- 858
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1058 TGACAGCTGAAAAATTGTCTTCAAATTTACAGCACCATTTCAGTTTGTCATCTGTTTATTCACATTACTTTCCT 1131
Query 859 -------------------------------------------------------------------------- 858
Sbjct 1132 GACACTGGAATTCCAGAAGTGACCACCTGTCATTCCCGAAGTGCCATAACTGTGGATTATATTTTCTACTCTGC 1205
Query 859 -------------------------------------------------------------------------- 858
Sbjct 1206 AGAAAAGGAAGATGTTGCTGGGCACCCAGGAGCTGAAGTTGCTTTGGTTGGTGGCTTGAAACTTCTAGCTAGAC 1279
Query 859 -------------------------------------------------------------------------- 858
Sbjct 1280 TGTCACTTCTTACAGAACAAGACTTATGGACTGTTAATGGACTTCCAAACGAAAATAACTCTTCAGATCATCTG 1353
Query 859 -------------------------------------------------------------------------- 858
Sbjct 1354 CCTTTATTGGCAAAGTTCAGACTTGAGCTCTGACTCTCTTTGATCACATACTAATTTTCTTTCCAATTTGTATT 1427
Query 859 -------------------------------------------------------------------------- 858
Sbjct 1428 GTTTTTCAAAGAATGTAAAGTTCTTAAGTGTATGCATGTTGTTTATTTTTGCACTGTGGAGATTCTGAAGCGGT 1501
Query 859 -------------------------------------------------------------------------- 858
Sbjct 1502 TATGTTAGATGCTTTGAAACTCCATATCAGAAGAAATAACTTTATAACAATTTTTTTTAATAATGAAAAATATT 1575
Query 859 -------------------------------------------------------------------------- 858
Sbjct 1576 TTCGTGACAAGTGAGCTCTAAATTCTCTTTATTGTAAAAGAGATGTAAAGGTTTTATATTCTAAATCCTAGTAA 1649
Query 859 -------------------------------------------------------------------------- 858
Sbjct 1650 AATTGACAGTGATTTTTAAATATAATGCATCTTCCTTTGTCTGCTTAGTAAAAAATTTCATTTCATAATTTTGG 1723
Query 859 -------------------------------------------------------------------------- 858
Sbjct 1724 CAAGCTCTGTAGTGGATCCAAAGTATCTTTGAGTTCTTGCAAACTACAAGTTGTTTCCTTTCCAGAAGGCTTGA 1797
Query 859 -------------------------------------------------------------------------- 858
Sbjct 1798 TTTCATTAGGAGACCCCTCTATTGAGTTCTAAATAGTTTATCTTAGAAAGCCTTGGGTCATTCACAGGTATCCA 1871
Query 859 -------------------------------------------------------------------------- 858
Sbjct 1872 ACCAGCCATTGTTTAGTTTGTTTTTGAAGGGGTTTGATAATGCTTTTTAAGTTGTACAGAATGCTTAATCCATC 1945
Query 859 -------------------------------------------------------------------------- 858
Sbjct 1946 TTATTACTGTCCTGAGCCATGTAATATGCCTGCATCGTGTTGGGGAAATGTTTGGGAAATATAAGCCAGCATAA 2019
Query 859 -------------------------------------------------------------------------- 858
Sbjct 2020 CGTGTAAAGCTCACTCTTTCACCCTGGAACAGACAAGAGGTGGGCTTAATAGAGGCAGAGACTGGGGATATACC 2093
Query 859 -------------------------------------------------------------------------- 858
Sbjct 2094 TTTGTTTCCCTAGCATTTTTATTTATTTATTTTTATTTTATTTTATTTTTTGAGATGGAGTTTCACTCTTGTTG 2167
Query 859 -------------------------------------------------------------------------- 858
Sbjct 2168 CCCAGGCTGGGGGTGCAATGGCGCAATCTTTGCTCACTGCAACCCCTGCCTCCCGGGCTCAAGCGATTCTCCTG 2241
Query 859 -------------------------------------------------------------------------- 858
Sbjct 2242 CCTCAGCCTCTCGAGTAGCTGGGATTACAGGCATGCGTCACCACTCCCAGCTAATTTTGTATTTTCAGTAGAGA 2315
Query 859 -------------------------------------------------------------------------- 858
Sbjct 2316 CAGGGTTTCCCCATGTTGGTTAGGCTGGTCTCGAACTCCCAACCTCAGGTGATCCGCCCACCTCAGCTCTCAAA 2389
Query 859 -------------------------------------------------------------------------- 858
Sbjct 2390 GTGCTGGGATTACAGGCGGGAGCCACTGCACATGGCAGCATTTTTTAAAAATTCAGTTTTAAGATCTCTGGTTT 2463
Query 859 -------------------------------------------------------------------------- 858
Sbjct 2464 AGGGGAGAGATTTTATTTTACTGAACCAGTTCTATAGAAATTTATTTTATTAGGAAATTTGTCTTTGGAACAAA 2537
Query 859 -------------------------------------------------------------------------- 858
Sbjct 2538 GTGGCAGCTATAAAATTATTTTTGTTAAGCCTCAGAAATATGAGGAAGCCTGTAAAACTCTAGTGGGGAGATAT 2611
Query 859 -------------------------------------------------------------------------- 858
Sbjct 2612 TAACTTGGAGACCTAATGCTCTGTAAATAGTCATTTAAACTGTTGGTTTTAGTGGTTTTGTTTCTAAAATGTTT 2685
Query 859 -------------------------------------------------------------------------- 858
Sbjct 2686 TCTTTTACCGTGATGCACCAGTATGAGATGGTGCTGACACTTTCTATGAAGTGGTTATGAGCAGGTTTAATAAA 2759
Query 859 -------------------------------------------------------------------------- 858
Sbjct 2760 TCCTCTATACAAGTGTTTGAATCAATTTTAAAACATAAAAAGTGGAAATTTCCTTTTTTGTAGACAGTAGGAAC 2833
Query 859 -------------------------------------------------------------------------- 858
Sbjct 2834 AAGGAATTATATGCATTTTTACTAAGTAGTAATTTTACACTGAATTGTAAATGTTTTTACAGTGAGTTTTATTA 2907
Query 859 -------------------------------------------------------------------------- 858
Sbjct 2908 ATAGAATGCTTCACCTTAAATTGGAAAACAATAATAGTCTTGGACTAAGTCTTTGTACTAAAGCATTTGCTATA 2981
Query 859 -------------------------------------------------------------------------- 858
Sbjct 2982 ATTATTTTTAAAAAAACAAACAGATGAAAACCTCAGAGAAGGCATGTGGATTATAAGATTTGTCTAGTAAAAAT 3055
Query 859 -------------------------------------------------------------------------- 858
Sbjct 3056 TGTAATTGAATATGTTTAAATATTTAATTTCTCATTTTGGGGGGTTTTTATTTTTTTATTTTTTAGATGGTGTC 3129
Query 859 -------------------------------------------------------------------------- 858
Sbjct 3130 TCACGCTATCGCCCAGGCTGGAGTGCAGTGGCGCGAACTCGGCTCACTGCAACCTCCGCCTCCTGGGTTCAAGC 3203
Query 859 -------------------------------------------------------------------------- 858
Sbjct 3204 AATTCTCCTTCCTCAGCCTCCCAAGTAGCTGGGATTACAGGCATGCACCACCATGCCCAGCTAATTTTTGTATT 3277
Query 859 -------------------------------------------------------------------------- 858
Sbjct 3278 TTTAGTAGAGATGGAATTTTGCCATGTTGGCCAGGCTGGTCTTGAACTCCTGACCTCAGGGGTGATCCACCCGC 3351
Query 859 -------------------------------------------------------------------------- 858
Sbjct 3352 CTCGGGCTCCCAAAGTGCTGTGATTACAGGCATGAGCCACCATGCCTGGCCTTTGGGGGGATTTTAATTACAGT 3425
Query 859 -------------------------------------------------------------------------- 858
Sbjct 3426 ATTAATTATAGTTCTAGGATTTCCCACATTTTATAGTAGTAGTTTGCAGGATATTATGTGCCCTAATTAGCAGA 3499
Query 859 -------------------------------------------------------------------------- 858
Sbjct 3500 TATAGACATTATCAAATTATAATGATAGTATAATTATCCCTTTTTAATATTGGGGAAAGAAAAATGAAAATTCA 3573
Query 859 -------------------------------------------------------------------------- 858
Sbjct 3574 TTAGTTAATTACTGCTTTGTGTTGTGTGAATTTATTAACAAATAACATTATTACATATAGGTCATTGTTAACAA 3647
Query 859 -------------------------------------------------------------------------- 858
Sbjct 3648 ACAAACATCCCTGAAAACCTCTGTGAAAATTTAATTTTTTATATCCTGATTAATATATTGTGACTTTAGGCCCA 3721
Query 859 -------------------------------------------------------------------------- 858
Sbjct 3722 TTTTTCATGTGCTTCACTTTGATAGAGTTAATCCATAAAATTGCTCTTTACTTTAGCTTATCAAATGAAGTATT 3795
Query 859 -------------------------------------------------------------------------- 858
Sbjct 3796 ATTTTGTGGACTGGAGGCCAAAAAGTCAATGTGAGCTTCTCACAGGTTTTTAAAGCTCCACTAAAAATAATTAT 3869
Query 859 -------------------------------------------------------------------------- 858
Sbjct 3870 CCACTTGTCTTTACTTTTGTTGACCAGAATAGTTGGTAACTCTGCCAGAGCCTGTACTTACCTGCCAAAAACAA 3943
Query 859 -------------------------------------------------------------------------- 858
Sbjct 3944 TTAAATCTGGTTAATGCCTGAAACCAAATCTCTCAGTCTCAAGTGTTATACTATCCAAGTTTTAAATGGAAAGG 4017
Query 859 -------------------------------------------------------------------------- 858
Sbjct 4018 TAAACTGTGGAGTAATGAAATTTTGGTTTTACTGTACCTTTTGCTATCAAGATAATATTCATGTTTGAAATCTT 4091
Query 859 -------------------------------------------------------------------------- 858
Sbjct 4092 GTCTTTATTTGGAATTTAGTTACTGTCTGCTTTTAACCTTTGCTTTCCTAAAGAAAGTTTGAGATCCAGAGAGT 4165
Query 859 -------------------------------------------------------------------------- 858
Sbjct 4166 TCAAGGGATTGGGGAAAGAGAGGCGTCAAGTCATTTGCACTTTGTACCTGTAAGTTAGGTAATAAACTATTATA 4239
Query 859 ------------------------- 858
Sbjct 4240 CTCGTAAAAAAAAAAAAAAAAAAAA 4264
