Nucleotide Global Alignment
Description
- Query:
- TRCN0000465557
- Subject:
- XM_006497186.2
- Aligned Length:
- 1254
- Identities:
- 735
- Gaps:
- 396
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGGAAGGAACAATAAAAAGGAACTGGGAGTATTTATGTAGCCATAATAAAGAAAATACGAAGGACCTAGAAGA 74
Query 1 -------------------------------------------------------ATGTCCTATAATATACTTT 19
|||||.|||||.||.||.|
Sbjct 75 CAGAAATGTTGACTCCACGTGTGAGGACCGTGAAGATAAGTTTGACTTCTCAGTGATGTCTTATAACATCCTCT 148
Query 20 CACAAGATTTACTGGAAGATAACTCTCACCTTTATAGACATTGCCGGCGGCCAGTATTACACTGGAGTTTTAGG 93
|.||.|||||||||||.||||||||||||||.||.|||||||||||.||.|||||.|||||||||||||||.||
Sbjct 149 CGCAGGATTTACTGGAGGATAACTCTCACCTCTACAGACATTGCCGACGTCCAGTGTTACACTGGAGTTTTCGG 222
Query 94 TTTCCCAATATTCTGAAAGAAATTAAACATTTTGATGCAGACGTACTTTGTTTGCAAGAAGTTCAAGAAGATCA 167
||.||||||||..||||||||||.|||||||||||||||||.||.||||||.|.||.|||||||||||||||||
Sbjct 223 TTCCCCAATATCTTGAAAGAAATCAAACATTTTGATGCAGATGTGCTTTGTCTACAGGAAGTTCAAGAAGATCA 296
Query 168 TTATGGAGCAGAGATCAGGCCAAGTTTGGAATCACTGGGTTATCACTGTGAATATAAGATGCGGACAGGAAGGA 241
||||||..||||.||||||||||||.|||||||||||||||||||.|||||||||||.|||...||||||||||
Sbjct 297 TTATGGGACAGAAATCAGGCCAAGTCTGGAATCACTGGGTTATCATTGTGAATATAAAATGAAAACAGGAAGGA 370
Query 242 AACCTGATGGCTGTGCTATTTGCTTCAAACATTCCAAATTTTCACTCTTGTCAGTGAACCCAGTGGAATTCTTC 315
|.||.||.||||||||.||.||||||||||||||||..||.||.|||||.||.||||||||||||||.||||.|
Sbjct 371 AGCCCGACGGCTGTGCCATCTGCTTCAAACATTCCAGGTTCTCGCTCTTATCTGTGAACCCAGTGGAGTTCTGC 444
Query 316 CGCCCTGATATTTCTCTGTTGGACAGAGACAATGTTGGATTAGTTTTACTCTTACAGCCCAAAATTCCATATGC 389
||||..||.|||.|||||.|||||||.|||||..|||||||.|||||||||.|.||||||||.||.|||...||
Sbjct 445 CGCCGCGACATTCCTCTGCTGGACAGGGACAACATTGGATTGGTTTTACTCCTGCAGCCCAAGATCCCACGCGC 518
Query 390 TGCCTGCCCTGCAATCTGCGTAGCAAATACGCATCTGTTGTATAATCCAAGGCGAGGTGATATTAAGCTGACGC 463
|||||..||..|.||||||.||||.||.||.||||||.|.|||||||||.||||.|||||.|||||||||||.|
Sbjct 519 TGCCTCTCCATCCATCTGCATAGCTAACACACATCTGCTCTATAATCCACGGCGCGGTGACATTAAGCTGACCC 592
Query 464 AATTGGCAATGCTACTGGCAGAGATTTCCAGTGTTGCCCACCAGAAAGATGGCAGCTTCTGCCCTATTGTTATG 537
|..||||||||||.||.||.||||||.|||.|||..||||.|..|||||||||||||.|||.||||||||.|||
Sbjct 593 AGCTGGCAATGCTGCTAGCTGAGATTGCCAATGTGACCCATCGCAAAGATGGCAGCTCCTGTCCTATTGTCATG 666
Query 538 TGTGGTGACTTTAATTCTGTTCCTGGTTCTCCACTATATAGTTTCATAAAGGAAGGAAAATTGAATTATGAAGG 611
|||||||||||||||||||||||||||||||||||.||||||||||||||||||||||||||.|||||||||||
Sbjct 667 TGTGGTGACTTTAATTCTGTTCCTGGTTCTCCACTCTATAGTTTCATAAAGGAAGGAAAATTAAATTATGAAGG 740
Query 612 ACTTCCCATAGGAAAGGTATCTGGCCAGGAACAGTCTTCACGGGGACAAAGAATTTTATCTATTCCAATTTGGC 685
.|||.|.||.||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 741 TCTTGCAATTGGAAAGGTATCTGGCCAGGAACAGTCTTCACGGGGACAAAGAATTTTATCTATTCCAATTTGGC 814
Query 686 CCCCAAACCTAGGTATCTCACAGAACTGTGTGTATGAGGTACAGCAGGTACCAAAAGTAGAAAAGACAGACAGT 759
|||||||||||||.|||||.|||||||||||.|||||||.|||||||||.||.|||||||||||.|||||||||
Sbjct 815 CCCCAAACCTAGGCATCTCTCAGAACTGTGTTTATGAGGCACAGCAGGTTCCCAAAGTAGAAAAAACAGACAGT 888
Query 760 GATCTGACACAAACACAGCTGAAGCAAACAGAGGTCCTAGTGACAGCTGAAAAATTGTCTTCAAATTTACAGCA 833
|||.||||.|||.||||||.|.||.||.|.|||||||.||||.|||||||.|||.||||.||..||.|||||||
Sbjct 889 GATGTGACTCAAGCACAGCAGGAGAAAGCGGAGGTCCCAGTGTCAGCTGACAAAGTGTCCTCGCATCTACAGCA 962
Query 834 CCATTTCAGTTTGTCATCTGTTTAT------------------------------------------------- 858
|..||||||.|||||||||||.|||
Sbjct 963 CGGTTTCAGCTTGTCATCTGTCTATTCCCATTATGTTCCTGACACTGGAGTTCCAGAGGTGACCACCTGCCATT 1036
Query 859 -------------------------------------------------------------------------- 858
Sbjct 1037 CCCGAAGTGCCATAACTGTTGATTATATTTTCTACACTGCAAAGAAGGAGAACACTGCTCAGGGGCCAGGAGCT 1110
Query 859 -------------------------------------------------------------------------- 858
Sbjct 1111 GAAGTTGCTTTGGTTGGTGGCTTGAAACTTCTAGCTAGACTGTCACTTCTAACAGAGCAAGACTTGTGGACTGT 1184
Query 859 ---------------------------------------------------------------------- 858
Sbjct 1185 GAACGGCCTTCCCAATGAGCACAACTCCTCAGATCACCTGCCTTTGCTGGCCAAGTTCAGGCTTGAGCTC 1254