Nucleotide Global Alignment

Description

Query:
TRCN0000465557
Subject:
XR_001737528.1
Aligned Length:
4386
Identities:
731
Gaps:
3655

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  GAAGAGGAAGAGGGTCTGGGCGATGGTGCATCCGGGACGAGCCTCCAGAGACCAAGCGGGATAGGTAAACCCGC  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  CGCGCAGCTGGCGGGACGCTGGGCCAACGAGGTCTGGGGTCTTGGCGCGGAGTTCATGGGCCGCCGGCCAGGCT  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  TGTGCCAGTGGCTTTGGATCCCTGGCCTGCTTCCCCCAACCCAGCCTCCAGACCAGCGCTGGCCTGCTCCACAC  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  ACTCCGCAGCACCGTCCCGGGAACCGAGCGTCGGCGGGGAGGCCGCCTCTCCGCAGTGTGATAAAGCGGAATTG  296

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  297  GGAATATATATGTAGCCATGATAAAGAAAAAACGAAGATCCTAGGAGACAAAAATGTTGATCCCAAATGTGAAG  370

Query    1  -----------------------------ATGTCCTATAATATACTTTCACAAGATTTACTGGAAGATAACTCT  45
                                         |||||||||||||||||||||||||||||||||||||||||||||
Sbjct  371  ACAGTGAGAACAAGTTTGACTTTTCAGTGATGTCCTATAATATACTTTCACAAGATTTACTGGAAGATAACTCT  444

Query   46  CACCTTTATAGACATTGCCGGCGGCCAGTATTACACTGGAGTTTTAGGTTTCCCAATATTCTGAAAGAAATTAA  119
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  445  CACCTTTATAGACATTGCCGGCGGCCAGTATTACACTGGAGTTTTAGGTTTCCCAATATTCTGAAAGAAATTAA  518

Query  120  ACATTTTGATGCAGACGTACTTTGTTTGCAAGAAGTTCAAGAAGATCATTATGGAGCAGAGATCAGGCCAAGTT  193
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  519  ACATTTTGATGCAGACGTACTTTGTTTGCAAGAAGTTCAAGAAGATCATTATGGAGCAGAGATCAGGCCAAGTT  592

Query  194  TGGAATCACTGGGTTATCACTGTGAATATAAGATGCGGACAGGAAGGAAACCTGATGGCTGTGCTATTTGCTTC  267
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  593  TGGAATCACTGGGTTATCACTGTGAATATAAGATGCGGACAGGAAGGAAACCTGATGGCTGTGCTATTTGCTTC  666

Query  268  AAACATTCCAAATTTTCACTCTTGTCAGTGAACCCAGTGGAATTCTTCCGCCCTGATATTTCTCTGTTGGACAG  341
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  667  AAACATTCCAAATTTTCACTCTTGTCAGTGAACCCAGTGGAATTCTTCCGCCCTGATATTTCTCTGTTGGACAG  740

Query  342  AGACAATGTTGGATTAGTTTTACTCTTACAGCCCAAAATTCCATATGCTGCCTGCCCTGCAATCTGCGTAGCAA  415
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  741  AGACAATGTTGGATTAGTTTTACTCTTACAGCCCAAAATTCCATATGCTGCCTGCCCTGCAATCTGCGTAGCAA  814

Query  416  ATACGCATCTGTTGTATAATCCAAGGCGAGGTGATATTAAGCTGACGCAATTGGCAATGCTACTGGCAGAGATT  489
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  815  ATACGCATCTGTTGTATAATCCAAGGCGAGGTGATATTAAGCTGACGCAATTGGCAATGCTACTGGCAGAGATT  888

Query  490  TCCAGTGTTGCCCACCAGAAAGATGGCAGCTTCTGCCCTATTGTTATGTGTGGTGACTTTAATTCTGTTCCTGG  563
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  889  TCCAGTGTTGCCCACCAGAAAGATGGCAGCTTCTGCCCTATTGTTATGTGTGGTGACTTTAATTCTGTTCCTGG  962

Query  564  TTCTCCACTATATAGTTTCATAAAGGAAGGAAAATTGAATTATGAAGGACTTCCCATAGGAAAGGTATCTGGCC  637
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||            
Sbjct  963  TTCTCCACTATATAGTTTCATAAAGGAAGGAAAATTGAATTATGAAGGACTTCCCATAGGAA------------  1024

Query  638  AGGAACAGTCTTCACGGGGACAAAGAATTTTATCTATTCCAATTTGGCCCCCAAACCTAGGTATCTCACAGAAC  711
                                                                                      
Sbjct 1025  --------------------------------------------------------------------------  1024

Query  712  TGTGTGTATGAGGTACAGCAGGTACCAAAAGTAGAAAAGACAGACAGTGATCTGACACAAACACAGCTGAAGCA  785
                                                     |||||||||||||||||||||||||||||||||
Sbjct 1025  -----------------------------------------AGACAGTGATCTGACACAAACACAGCTGAAGCA  1057

Query  786  AACAGAGGTCCTAGTGACAGCTGAAAAATTGTCTTCAAATTTACAGCACCATTTCAGTTTGTCATCTGTTTAT-  858
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| 
Sbjct 1058  AACAGAGGTCCTAGTGACAGCTGAAAAATTGTCTTCAAATTTACAGCACCATTTCAGTTTGTCATCTGTTTATT  1131

Query  859  --------------------------------------------------------------------------  858
                                                                                      
Sbjct 1132  CACATTACTTTCCTGACACTGGAATTCCAGAAGTGACCACCTGTCATTCCCGAAGTGCCATAACTGTGGATTAT  1205

Query  859  --------------------------------------------------------------------------  858
                                                                                      
Sbjct 1206  ATTTTCTACTCTGCAGAAAAGGAAGATGTTGCTGGGCACCCAGGAGCTGAAGTTGCTTTGGTTGGTGGCTTGAA  1279

Query  859  --------------------------------------------------------------------------  858
                                                                                      
Sbjct 1280  ACTTCTAGCTAGACTGTCACTTCTTACAGAACAAGACTTATGGACTGTTAATGGACTTCCAAACGAAAATAACT  1353

Query  859  --------------------------------------------------------------------------  858
                                                                                      
Sbjct 1354  CTTCAGATCATCTGCCTTTATTGGCAAAGTTCAGACTTGAGCTCTGACTCTCTTTGATCACATACTAATTTTCT  1427

Query  859  --------------------------------------------------------------------------  858
                                                                                      
Sbjct 1428  TTCCAATTTGTATTGTTTTTCAAAGAATGTAAAGTTCTTAAGTGTATGCATGTTGTTTATTTTTGCACTGTGGA  1501

Query  859  --------------------------------------------------------------------------  858
                                                                                      
Sbjct 1502  GATTCTGAAGCGGTTATGTTAGATGCTTTGAAACTCCATATCAGAAGAAATAACTTTATAACAATTTTTTTTAA  1575

Query  859  --------------------------------------------------------------------------  858
                                                                                      
Sbjct 1576  TAATGAAAAATATTTTCGTGACAAGTGAGCTCTAAATTCTCTTTATTGTAAAAGAGATGTAAAGGTTTTATATT  1649

Query  859  --------------------------------------------------------------------------  858
                                                                                      
Sbjct 1650  CTAAATCCTAGTAAAATTGACAGTGATTTTTAAATATAATGCATCTTCCTTTGTCTGCTTAGTAAAAAATTTCA  1723

Query  859  --------------------------------------------------------------------------  858
                                                                                      
Sbjct 1724  TTTCATAATTTTGGCAAGCTCTGTAGTGGATCCAAAGTATCTTTGAGTTCTTGCAAACTACAAGTTGTTTCCTT  1797

Query  859  --------------------------------------------------------------------------  858
                                                                                      
Sbjct 1798  TCCAGAAGGCTTGATTTCATTAGGAGACCCCTCTATTGAGTTCTAAATAGTTTATCTTAGAAAGCCTTGGGTCA  1871

Query  859  --------------------------------------------------------------------------  858
                                                                                      
Sbjct 1872  TTCACAGGTATCCAACCAGCCATTGTTTAGTTTGTTTTTGAAGGGGTTTGATAATGCTTTTTAAGTTGTACAGA  1945

Query  859  --------------------------------------------------------------------------  858
                                                                                      
Sbjct 1946  ATGCTTAATCCATCTTATTACTGTCCTGAGCCATGTAATATGCCTGCATCGTGTTGGGGAAATGTTTGGGAAAT  2019

Query  859  --------------------------------------------------------------------------  858
                                                                                      
Sbjct 2020  ATAAGCCAGCATAACGTGTAAAGCTCACTCTTTCACCCTGGAACAGACAAGAGGTGGGCTTAATAGAGGCAGAG  2093

Query  859  --------------------------------------------------------------------------  858
                                                                                      
Sbjct 2094  ACTGGGGATATACCTTTGTTTCCCTAGCATTTTTATTTATTTATTTTTATTTTATTTTATTTTTTGAGATGGAG  2167

Query  859  --------------------------------------------------------------------------  858
                                                                                      
Sbjct 2168  TTTCACTCTTGTTGCCCAGGCTGGGGGTGCAATGGCGCAATCTTTGCTCACTGCAACCCCTGCCTCCCGGGCTC  2241

Query  859  --------------------------------------------------------------------------  858
                                                                                      
Sbjct 2242  AAGCGATTCTCCTGCCTCAGCCTCTCGAGTAGCTGGGATTACAGGCATGCGTCACCACTCCCAGCTAATTTTGT  2315

Query  859  --------------------------------------------------------------------------  858
                                                                                      
Sbjct 2316  ATTTTCAGTAGAGACAGGGTTTCCCCATGTTGGTTAGGCTGGTCTCGAACTCCCAACCTCAGGTGATCCGCCCA  2389

Query  859  --------------------------------------------------------------------------  858
                                                                                      
Sbjct 2390  CCTCAGCTCTCAAAGTGCTGGGATTACAGGCGGGAGCCACTGCACATGGCAGCATTTTTTAAAAATTCAGTTTT  2463

Query  859  --------------------------------------------------------------------------  858
                                                                                      
Sbjct 2464  AAGATCTCTGGTTTAGGGGAGAGATTTTATTTTACTGAACCAGTTCTATAGAAATTTATTTTATTAGGAAATTT  2537

Query  859  --------------------------------------------------------------------------  858
                                                                                      
Sbjct 2538  GTCTTTGGAACAAAGTGGCAGCTATAAAATTATTTTTGTTAAGCCTCAGAAATATGAGGAAGCCTGTAAAACTC  2611

Query  859  --------------------------------------------------------------------------  858
                                                                                      
Sbjct 2612  TAGTGGGGAGATATTAACTTGGAGACCTAATGCTCTGTAAATAGTCATTTAAACTGTTGGTTTTAGTGGTTTTG  2685

Query  859  --------------------------------------------------------------------------  858
                                                                                      
Sbjct 2686  TTTCTAAAATGTTTTCTTTTACCGTGATGCACCAGTATGAGATGGTGCTGACACTTTCTATGAAGTGGTTATGA  2759

Query  859  --------------------------------------------------------------------------  858
                                                                                      
Sbjct 2760  GCAGGTTTAATAAATCCTCTATACAAGTGTTTGAATCAATTTTAAAACATAAAAAGTGGAAATTTCCTTTTTTG  2833

Query  859  --------------------------------------------------------------------------  858
                                                                                      
Sbjct 2834  TAGACAGTAGGAACAAGGAATTATATGCATTTTTACTAAGTAGTAATTTTACACTGAATTGTAAATGTTTTTAC  2907

Query  859  --------------------------------------------------------------------------  858
                                                                                      
Sbjct 2908  AGTGAGTTTTATTAATAGAATGCTTCACCTTAAATTGGAAAACAATAATAGTCTTGGACTAAGTCTTTGTACTA  2981

Query  859  --------------------------------------------------------------------------  858
                                                                                      
Sbjct 2982  AAGCATTTGCTATAATTATTTTTAAAAAAACAAACAGATGAAAACCTCAGAGAAGGCATGTGGATTATAAGATT  3055

Query  859  --------------------------------------------------------------------------  858
                                                                                      
Sbjct 3056  TGTCTAGTAAAAATTGTAATTGAATATGTTTAAATATTTAATTTCTCATTTTGGGGGGTTTTTATTTTTTTATT  3129

Query  859  --------------------------------------------------------------------------  858
                                                                                      
Sbjct 3130  TTTTAGATGGTGTCTCACGCTATCGCCCAGGCTGGAGTGCAGTGGCGCGAACTCGGCTCACTGCAACCTCCGCC  3203

Query  859  --------------------------------------------------------------------------  858
                                                                                      
Sbjct 3204  TCCTGGGTTCAAGCAATTCTCCTTCCTCAGCCTCCCAAGTAGCTGGGATTACAGGCATGCACCACCATGCCCAG  3277

Query  859  --------------------------------------------------------------------------  858
                                                                                      
Sbjct 3278  CTAATTTTTGTATTTTTAGTAGAGATGGAATTTTGCCATGTTGGCCAGGCTGGTCTTGAACTCCTGACCTCAGG  3351

Query  859  --------------------------------------------------------------------------  858
                                                                                      
Sbjct 3352  GGTGATCCACCCGCCTCGGGCTCCCAAAGTGCTGTGATTACAGGCATGAGCCACCATGCCTGGCCTTTGGGGGG  3425

Query  859  --------------------------------------------------------------------------  858
                                                                                      
Sbjct 3426  ATTTTAATTACAGTATTAATTATAGTTCTAGGATTTCCCACATTTTATAGTAGTAGTTTGCAGGATATTATGTG  3499

Query  859  --------------------------------------------------------------------------  858
                                                                                      
Sbjct 3500  CCCTAATTAGCAGATATAGACATTATCAAATTATAATGATAGTATAATTATCCCTTTTTAATATTGGGGAAAGA  3573

Query  859  --------------------------------------------------------------------------  858
                                                                                      
Sbjct 3574  AAAATGAAAATTCATTAGTTAATTACTGCTTTGTGTTGTGTGAATTTATTAACAAATAACATTATTACATATAG  3647

Query  859  --------------------------------------------------------------------------  858
                                                                                      
Sbjct 3648  GTCATTGTTAACAAACAAACATCCCTGAAAACCTCTGTGAAAATTTAATTTTTTATATCCTGATTAATATATTG  3721

Query  859  --------------------------------------------------------------------------  858
                                                                                      
Sbjct 3722  TGACTTTAGGCCCATTTTTCATGTGCTTCACTTTGATAGAGTTAATCCATAAAATTGCTCTTTACTTTAGCTTA  3795

Query  859  --------------------------------------------------------------------------  858
                                                                                      
Sbjct 3796  TCAAATGAAGTATTATTTTGTGGACTGGAGGCCAAAAAGTCAATGTGAGCTTCTCACAGGTTTTTAAAGCTCCA  3869

Query  859  --------------------------------------------------------------------------  858
                                                                                      
Sbjct 3870  CTAAAAATAATTATCCACTTGTCTTTACTTTTGTTGACCAGAATAGTTGGTAACTCTGCCAGAGCCTGTACTTA  3943

Query  859  --------------------------------------------------------------------------  858
                                                                                      
Sbjct 3944  CCTGCCAAAAACAATTAAATCTGGTTAATGCCTGAAACCAAATCTCTCAGTCTCAAGTGTTATACTATCCAAGT  4017

Query  859  --------------------------------------------------------------------------  858
                                                                                      
Sbjct 4018  TTTAAATGGAAAGGTAAACTGTGGAGTAATGAAATTTTGGTTTTACTGTACCTTTTGCTATCAAGATAATATTC  4091

Query  859  --------------------------------------------------------------------------  858
                                                                                      
Sbjct 4092  ATGTTTGAAATCTTGTCTTTATTTGGAATTTAGTTACTGTCTGCTTTTAACCTTTGCTTTCCTAAAGAAAGTTT  4165

Query  859  --------------------------------------------------------------------------  858
                                                                                      
Sbjct 4166  GAGATCCAGAGAGTTCAAGGGATTGGGGAAAGAGAGGCGTCAAGTCATTTGCACTTTGTACCTGTAAGTTAGGT  4239

Query  859  --------------------  858
                                
Sbjct 4240  AATAAACTATTATACTCGTA  4259

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