Nucleotide Global Alignment
Description
- Query:
- TRCN0000465557
- Subject:
- XR_001737529.2
- Aligned Length:
- 4719
- Identities:
- 731
- Gaps:
- 3988
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 GTGGAAGGAAGAGGAAGAGGGTCTGGGCGATGGTGCATCCGGGACGAGCCTCCAGAGACCAAGCGGGATAGGTA 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 AACCCGCCGCGCAGCTGGCGGGACGCTGGGCCAACGAGGTCTGGGGTCTTGGCGCGGAGTTCATGGGCCGCCGG 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 CCAGGCTTGTGCCAGTGGCTTTGGATCCCTGGCCTGCTTCCCCCAACCCAGCCTCCAGACCAGCGCTGGCCTGC 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 TCCACACACTCCGCAGCACCGTCCCGGGAACCGAGCGTCGGCGGGGAGGCCGCCTCTCCGCAATACCCCATGTT 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 TCCCCATCACTCGAGGAGTCTGGGCAGAGACTGGACTACACCGTGGGAGAATCTGCAAAGGTGTTGCTGGAACA 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 GACATATTTCTAGTTGTATGAGGTGGCCTGGACATTACTCTCGAGCTCCTTACCCATACTTCAGTAGTAGGCAT 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 TTTTCACTAAATTGGAGACCACCCTGTTTGTTTGAGTCTAGAACTCAGTTCCAGTACTGTAACTGGAGACCTGA 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 CAACCTGAGCCAGACATCTTTGATTCATCTCTCTAGTTACGTCATGAACGCTGAGGGAGATGAGCCTTCATCAA 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 AACGAAGAAAACACCAAGGTGTGATAAAGCGGAATTGGGAATATATATGTAGCCATGATAAAGAAAAAACGAAG 666
Query 1 ------------------------------------------------------------------ATGTCCTA 8
||||||||
Sbjct 667 ATCCTAGGAGACAAAAATGTTGATCCCAAATGTGAAGACAGTGAGAACAAGTTTGACTTTTCAGTGATGTCCTA 740
Query 9 TAATATACTTTCACAAGATTTACTGGAAGATAACTCTCACCTTTATAGACATTGCCGGCGGCCAGTATTACACT 82
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 741 TAATATACTTTCACAAGATTTACTGGAAGATAACTCTCACCTTTATAGACATTGCCGGCGGCCAGTATTACACT 814
Query 83 GGAGTTTTAGGTTTCCCAATATTCTGAAAGAAATTAAACATTTTGATGCAGACGTACTTTGTTTGCAAGAAGTT 156
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 815 GGAGTTTTAGGTTTCCCAATATTCTGAAAGAAATTAAACATTTTGATGCAGACGTACTTTGTTTGCAAGAAGTT 888
Query 157 CAAGAAGATCATTATGGAGCAGAGATCAGGCCAAGTTTGGAATCACTGGGTTATCACTGTGAATATAAGATGCG 230
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 889 CAAGAAGATCATTATGGAGCAGAGATCAGGCCAAGTTTGGAATCACTGGGTTATCACTGTGAATATAAGATGCG 962
Query 231 GACAGGAAGGAAACCTGATGGCTGTGCTATTTGCTTCAAACATTCCAAATTTTCACTCTTGTCAGTGAACCCAG 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 963 GACAGGAAGGAAACCTGATGGCTGTGCTATTTGCTTCAAACATTCCAAATTTTCACTCTTGTCAGTGAACCCAG 1036
Query 305 TGGAATTCTTCCGCCCTGATATTTCTCTGTTGGACAGAGACAATGTTGGATTAGTTTTACTCTTACAGCCCAAA 378
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037 TGGAATTCTTCCGCCCTGATATTTCTCTGTTGGACAGAGACAATGTTGGATTAGTTTTACTCTTACAGCCCAAA 1110
Query 379 ATTCCATATGCTGCCTGCCCTGCAATCTGCGTAGCAAATACGCATCTGTTGTATAATCCAAGGCGAGGTGATAT 452
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1111 ATTCCATATGCTGCCTGCCCTGCAATCTGCGTAGCAAATACGCATCTGTTGTATAATCCAAGGCGAGGTGATAT 1184
Query 453 TAAGCTGACGCAATTGGCAATGCTACTGGCAGAGATTTCCAGTGTTGCCCACCAGAAAGATGGCAGCTTCTGCC 526
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1185 TAAGCTGACGCAATTGGCAATGCTACTGGCAGAGATTTCCAGTGTTGCCCACCAGAAAGATGGCAGCTTCTGCC 1258
Query 527 CTATTGTTATGTGTGGTGACTTTAATTCTGTTCCTGGTTCTCCACTATATAGTTTCATAAAGGAAGGAAAATTG 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1259 CTATTGTTATGTGTGGTGACTTTAATTCTGTTCCTGGTTCTCCACTATATAGTTTCATAAAGGAAGGAAAATTG 1332
Query 601 AATTATGAAGGACTTCCCATAGGAAAGGTATCTGGCCAGGAACAGTCTTCACGGGGACAAAGAATTTTATCTAT 674
|||||||||||||||||||||||||
Sbjct 1333 AATTATGAAGGACTTCCCATAGGAA------------------------------------------------- 1357
Query 675 TCCAATTTGGCCCCCAAACCTAGGTATCTCACAGAACTGTGTGTATGAGGTACAGCAGGTACCAAAAGTAGAAA 748
Sbjct 1358 -------------------------------------------------------------------------- 1357
Query 749 AGACAGACAGTGATCTGACACAAACACAGCTGAAGCAAACAGAGGTCCTAGTGACAGCTGAAAAATTGTCTTCA 822
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1358 ----AGACAGTGATCTGACACAAACACAGCTGAAGCAAACAGAGGTCCTAGTGACAGCTGAAAAATTGTCTTCA 1427
Query 823 AATTTACAGCACCATTTCAGTTTGTCATCTGTTTAT-------------------------------------- 858
||||||||||||||||||||||||||||||||||||
Sbjct 1428 AATTTACAGCACCATTTCAGTTTGTCATCTGTTTATTCACATTACTTTCCTGACACTGGAATTCCAGAAGTGAC 1501
Query 859 -------------------------------------------------------------------------- 858
Sbjct 1502 CACCTGTCATTCCCGAAGTGCCATAACTGTGGATTATATTTTCTACTCTGCAGAAAAGGAAGATGTTGCTGGGC 1575
Query 859 -------------------------------------------------------------------------- 858
Sbjct 1576 ACCCAGGAGCTGAAGTTGCTTTGGTTGGTGGCTTGAAACTTCTAGCTAGACTGTCACTTCTTACAGAACAAGAC 1649
Query 859 -------------------------------------------------------------------------- 858
Sbjct 1650 TTATGGACTGTTAATGGACTTCCAAACGAAAATAACTCTTCAGATCATCTGCCTTTATTGGCAAAGTTCAGACT 1723
Query 859 -------------------------------------------------------------------------- 858
Sbjct 1724 TGAGCTCTGACTCTCTTTGATCACATACTAATTTTCTTTCCAATTTGTATTGTTTTTCAAAGAATGTAAAGTTC 1797
Query 859 -------------------------------------------------------------------------- 858
Sbjct 1798 TTAAGTGTATGCATGTTGTTTATTTTTGCACTGTGGAGATTCTGAAGCGGTTATGTTAGATGCTTTGAAACTCC 1871
Query 859 -------------------------------------------------------------------------- 858
Sbjct 1872 ATATCAGAAGAAATAACTTTATAACAATTTTTTTTAATAATGAAAAATATTTTCGTGACAAGTGAGCTCTAAAT 1945
Query 859 -------------------------------------------------------------------------- 858
Sbjct 1946 TCTCTTTATTGTAAAAGAGATGTAAAGGTTTTATATTCTAAATCCTAGTAAAATTGACAGTGATTTTTAAATAT 2019
Query 859 -------------------------------------------------------------------------- 858
Sbjct 2020 AATGCATCTTCCTTTGTCTGCTTAGTAAAAAATTTCATTTCATAATTTTGGCAAGCTCTGTAGTGGATCCAAAG 2093
Query 859 -------------------------------------------------------------------------- 858
Sbjct 2094 TATCTTTGAGTTCTTGCAAACTACAAGTTGTTTCCTTTCCAGAAGGCTTGATTTCATTAGGAGACCCCTCTATT 2167
Query 859 -------------------------------------------------------------------------- 858
Sbjct 2168 GAGTTCTAAATAGTTTATCTTAGAAAGCCTTGGGTCATTCACAGGTATCCAACCAGCCATTGTTTAGTTTGTTT 2241
Query 859 -------------------------------------------------------------------------- 858
Sbjct 2242 TTGAAGGGGTTTGATAATGCTTTTTAAGTTGTACAGAATGCTTAATCCATCTTATTACTGTCCTGAGCCATGTA 2315
Query 859 -------------------------------------------------------------------------- 858
Sbjct 2316 ATATGCCTGCATCGTGTTGGGGAAATGTTTGGGAAATATAAGCCAGCATAACGTGTAAAGCTCACTCTTTCACC 2389
Query 859 -------------------------------------------------------------------------- 858
Sbjct 2390 CTGGAACAGACAAGAGGTGGGCTTAATAGAGGCAGAGACTGGGGATATACCTTTGTTTCCCTAGCATTTTTATT 2463
Query 859 -------------------------------------------------------------------------- 858
Sbjct 2464 TATTTATTTTTATTTTATTTTATTTTTTGAGATGGAGTTTCACTCTTGTTGCCCAGGCTGGGGGTGCAATGGCG 2537
Query 859 -------------------------------------------------------------------------- 858
Sbjct 2538 CAATCTTTGCTCACTGCAACCCCTGCCTCCCGGGCTCAAGCGATTCTCCTGCCTCAGCCTCTCGAGTAGCTGGG 2611
Query 859 -------------------------------------------------------------------------- 858
Sbjct 2612 ATTACAGGCATGCGTCACCACTCCCAGCTAATTTTGTATTTTCAGTAGAGACAGGGTTTCCCCATGTTGGTTAG 2685
Query 859 -------------------------------------------------------------------------- 858
Sbjct 2686 GCTGGTCTCGAACTCCCAACCTCAGGTGATCCGCCCACCTCAGCTCTCAAAGTGCTGGGATTACAGGCGGGAGC 2759
Query 859 -------------------------------------------------------------------------- 858
Sbjct 2760 CACTGCACATGGCAGCATTTTTTAAAAATTCAGTTTTAAGATCTCTGGTTTAGGGGAGAGATTTTATTTTACTG 2833
Query 859 -------------------------------------------------------------------------- 858
Sbjct 2834 AACCAGTTCTATAGAAATTTATTTTATTAGGAAATTTGTCTTTGGAACAAAGTGGCAGCTATAAAATTATTTTT 2907
Query 859 -------------------------------------------------------------------------- 858
Sbjct 2908 GTTAAGCCTCAGAAATATGAGGAAGCCTGTAAAACTCTAGTGGGGAGATATTAACTTGGAGACCTAATGCTCTG 2981
Query 859 -------------------------------------------------------------------------- 858
Sbjct 2982 TAAATAGTCATTTAAACTGTTGGTTTTAGTGGTTTTGTTTCTAAAATGTTTTCTTTTACCGTGATGCACCAGTA 3055
Query 859 -------------------------------------------------------------------------- 858
Sbjct 3056 TGAGATGGTGCTGACACTTTCTATGAAGTGGTTATGAGCAGGTTTAATAAATCCTCTATACAAGTGTTTGAATC 3129
Query 859 -------------------------------------------------------------------------- 858
Sbjct 3130 AATTTTAAAACATAAAAAGTGGAAATTTCCTTTTTTGTAGACAGTAGGAACAAGGAATTATATGCATTTTTACT 3203
Query 859 -------------------------------------------------------------------------- 858
Sbjct 3204 AAGTAGTAATTTTACACTGAATTGTAAATGTTTTTACAGTGAGTTTTATTAATAGAATGCTTCACCTTAAATTG 3277
Query 859 -------------------------------------------------------------------------- 858
Sbjct 3278 GAAAACAATAATAGTCTTGGACTAAGTCTTTGTACTAAAGCATTTGCTATAATTATTTTTAAAAAAACAAACAG 3351
Query 859 -------------------------------------------------------------------------- 858
Sbjct 3352 ATGAAAACCTCAGAGAAGGCATGTGGATTATAAGATTTGTCTAGTAAAAATTGTAATTGAATATGTTTAAATAT 3425
Query 859 -------------------------------------------------------------------------- 858
Sbjct 3426 TTAATTTCTCATTTTGGGGGGTTTTTATTTTTTTATTTTTTAGATGGTGTCTCACGCTATCGCCCAGGCTGGAG 3499
Query 859 -------------------------------------------------------------------------- 858
Sbjct 3500 TGCAGTGGCGCGAACTCGGCTCACTGCAACCTCCGCCTCCTGGGTTCAAGCAATTCTCCTTCCTCAGCCTCCCA 3573
Query 859 -------------------------------------------------------------------------- 858
Sbjct 3574 AGTAGCTGGGATTACAGGCATGCACCACCATGCCCAGCTAATTTTTGTATTTTTAGTAGAGATGGAATTTTGCC 3647
Query 859 -------------------------------------------------------------------------- 858
Sbjct 3648 ATGTTGGCCAGGCTGGTCTTGAACTCCTGACCTCAGGGGTGATCCACCCGCCTCGGGCTCCCAAAGTGCTGTGA 3721
Query 859 -------------------------------------------------------------------------- 858
Sbjct 3722 TTACAGGCATGAGCCACCATGCCTGGCCTTTGGGGGGATTTTAATTACAGTATTAATTATAGTTCTAGGATTTC 3795
Query 859 -------------------------------------------------------------------------- 858
Sbjct 3796 CCACATTTTATAGTAGTAGTTTGCAGGATATTATGTGCCCTAATTAGCAGATATAGACATTATCAAATTATAAT 3869
Query 859 -------------------------------------------------------------------------- 858
Sbjct 3870 GATAGTATAATTATCCCTTTTTAATATTGGGGAAAGAAAAATGAAAATTCATTAGTTAATTACTGCTTTGTGTT 3943
Query 859 -------------------------------------------------------------------------- 858
Sbjct 3944 GTGTGAATTTATTAACAAATAACATTATTACATATAGGTCATTGTTAACAAACAAACATCCCTGAAAACCTCTG 4017
Query 859 -------------------------------------------------------------------------- 858
Sbjct 4018 TGAAAATTTAATTTTTTATATCCTGATTAATATATTGTGACTTTAGGCCCATTTTTCATGTGCTTCACTTTGAT 4091
Query 859 -------------------------------------------------------------------------- 858
Sbjct 4092 AGAGTTAATCCATAAAATTGCTCTTTACTTTAGCTTATCAAATGAAGTATTATTTTGTGGACTGGAGGCCAAAA 4165
Query 859 -------------------------------------------------------------------------- 858
Sbjct 4166 AGTCAATGTGAGCTTCTCACAGGTTTTTAAAGCTCCACTAAAAATAATTATCCACTTGTCTTTACTTTTGTTGA 4239
Query 859 -------------------------------------------------------------------------- 858
Sbjct 4240 CCAGAATAGTTGGTAACTCTGCCAGAGCCTGTACTTACCTGCCAAAAACAATTAAATCTGGTTAATGCCTGAAA 4313
Query 859 -------------------------------------------------------------------------- 858
Sbjct 4314 CCAAATCTCTCAGTCTCAAGTGTTATACTATCCAAGTTTTAAATGGAAAGGTAAACTGTGGAGTAATGAAATTT 4387
Query 859 -------------------------------------------------------------------------- 858
Sbjct 4388 TGGTTTTACTGTACCTTTTGCTATCAAGATAATATTCATGTTTGAAATCTTGTCTTTATTTGGAATTTAGTTAC 4461
Query 859 -------------------------------------------------------------------------- 858
Sbjct 4462 TGTCTGCTTTTAACCTTTGCTTTCCTAAAGAAAGTTTGAGATCCAGAGAGTTCAAGGGATTGGGGAAAGAGAGG 4535
Query 859 --------------------------------------------------------- 858
Sbjct 4536 CGTCAAGTCATTTGCACTTTGTACCTGTAAGTTAGGTAATAAACTATTATACTCGTA 4592
