Nucleotide Global Alignment

Description

Query:
TRCN0000465557
Subject:
XR_001737531.1
Aligned Length:
4939
Identities:
731
Gaps:
4208

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  TCAGGGACTCTGACTGCGCAAGATGGAGTGTAGGCCGGCCGGCGAGACTGCACCTCCCAGCATGCCTTGCAGCC  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  AGGACTGGAGTCGGTACTTAAGAGTGATGGGGTTCCCTAGATACTTTAGGCCGTCGCATCGATTATAGAGATTG  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  AGGTGGAACCCGGGGCCTGGGAACTGGACGCACGCGGAGGGCGAAGATGGAAGCCTGGCGCTGTGTGAGGAAGG  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  GCTACGGCCACTGTGTGGTGGGAAGAGGCCGATACCCCATGTTTCCCCATCACTCGAGGAGTCTGGGCAGAGAC  296

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  297  TGGACTACACCGTGGGAGAATCTGCAAAGGTGTTGCTGGAACAGACATATTTCTAGTTGTATGAGGTGGCCTGG  370

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  371  ACATTACTCTCGAGCTCCTTACCCATACTTCAGTAGTAGGCATTTTTCACTAAATTGGAGACCACCCTGTTTGT  444

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  445  TTGAGTCTAGAACTCAGTTCCAGTACTGTAACTGGAGACCTGACAACCTGAGCCAGACATCTTTGATTCATCTC  518

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  519  TCTAGTTACGTCATGAACGCTGAGGGAGATGAGCCTTCATCAAAACGAAGAAAACACCAAGGTGTTGTGAATAA  592

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  593  GGAAAATGCTCTTCGTTAAGCCATATTTGTGACTTCCGATATTTCACTAATACTTTTCAATCAAGAAAACAGCA  666

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  667  TTGCTAACTTGCCTATCACTTTAAAGTGGTATTTGAAGGATTTGTGTGATACAATTATGACTTTGTAATTAGGC  740

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  741  ACCCTAAAAACCTGATCAGGCCTATTGCTTACTTTCTTTGATTCATCTGTCTTCTCTGCTGTGATCACCTTGTT  814

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  815  CCTCCTGATATGGAAGGTGTGATAAAGCGGAATTGGGAATATATATGTAGCCATGATAAAGAAAAAACGAAGAT  888

Query    1  ----------------------------------------------------------------ATGTCCTATA  10
                                                                            ||||||||||
Sbjct  889  CCTAGGAGACAAAAATGTTGATCCCAAATGTGAAGACAGTGAGAACAAGTTTGACTTTTCAGTGATGTCCTATA  962

Query   11  ATATACTTTCACAAGATTTACTGGAAGATAACTCTCACCTTTATAGACATTGCCGGCGGCCAGTATTACACTGG  84
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  963  ATATACTTTCACAAGATTTACTGGAAGATAACTCTCACCTTTATAGACATTGCCGGCGGCCAGTATTACACTGG  1036

Query   85  AGTTTTAGGTTTCCCAATATTCTGAAAGAAATTAAACATTTTGATGCAGACGTACTTTGTTTGCAAGAAGTTCA  158
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037  AGTTTTAGGTTTCCCAATATTCTGAAAGAAATTAAACATTTTGATGCAGACGTACTTTGTTTGCAAGAAGTTCA  1110

Query  159  AGAAGATCATTATGGAGCAGAGATCAGGCCAAGTTTGGAATCACTGGGTTATCACTGTGAATATAAGATGCGGA  232
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1111  AGAAGATCATTATGGAGCAGAGATCAGGCCAAGTTTGGAATCACTGGGTTATCACTGTGAATATAAGATGCGGA  1184

Query  233  CAGGAAGGAAACCTGATGGCTGTGCTATTTGCTTCAAACATTCCAAATTTTCACTCTTGTCAGTGAACCCAGTG  306
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1185  CAGGAAGGAAACCTGATGGCTGTGCTATTTGCTTCAAACATTCCAAATTTTCACTCTTGTCAGTGAACCCAGTG  1258

Query  307  GAATTCTTCCGCCCTGATATTTCTCTGTTGGACAGAGACAATGTTGGATTAGTTTTACTCTTACAGCCCAAAAT  380
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1259  GAATTCTTCCGCCCTGATATTTCTCTGTTGGACAGAGACAATGTTGGATTAGTTTTACTCTTACAGCCCAAAAT  1332

Query  381  TCCATATGCTGCCTGCCCTGCAATCTGCGTAGCAAATACGCATCTGTTGTATAATCCAAGGCGAGGTGATATTA  454
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1333  TCCATATGCTGCCTGCCCTGCAATCTGCGTAGCAAATACGCATCTGTTGTATAATCCAAGGCGAGGTGATATTA  1406

Query  455  AGCTGACGCAATTGGCAATGCTACTGGCAGAGATTTCCAGTGTTGCCCACCAGAAAGATGGCAGCTTCTGCCCT  528
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1407  AGCTGACGCAATTGGCAATGCTACTGGCAGAGATTTCCAGTGTTGCCCACCAGAAAGATGGCAGCTTCTGCCCT  1480

Query  529  ATTGTTATGTGTGGTGACTTTAATTCTGTTCCTGGTTCTCCACTATATAGTTTCATAAAGGAAGGAAAATTGAA  602
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1481  ATTGTTATGTGTGGTGACTTTAATTCTGTTCCTGGTTCTCCACTATATAGTTTCATAAAGGAAGGAAAATTGAA  1554

Query  603  TTATGAAGGACTTCCCATAGGAAAGGTATCTGGCCAGGAACAGTCTTCACGGGGACAAAGAATTTTATCTATTC  676
            |||||||||||||||||||||||                                                   
Sbjct 1555  TTATGAAGGACTTCCCATAGGAA---------------------------------------------------  1577

Query  677  CAATTTGGCCCCCAAACCTAGGTATCTCACAGAACTGTGTGTATGAGGTACAGCAGGTACCAAAAGTAGAAAAG  750
                                                                                      
Sbjct 1578  --------------------------------------------------------------------------  1577

Query  751  ACAGACAGTGATCTGACACAAACACAGCTGAAGCAAACAGAGGTCCTAGTGACAGCTGAAAAATTGTCTTCAAA  824
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1578  --AGACAGTGATCTGACACAAACACAGCTGAAGCAAACAGAGGTCCTAGTGACAGCTGAAAAATTGTCTTCAAA  1649

Query  825  TTTACAGCACCATTTCAGTTTGTCATCTGTTTAT----------------------------------------  858
            ||||||||||||||||||||||||||||||||||                                        
Sbjct 1650  TTTACAGCACCATTTCAGTTTGTCATCTGTTTATTCACATTACTTTCCTGACACTGGAATTCCAGAAGTGACCA  1723

Query  859  --------------------------------------------------------------------------  858
                                                                                      
Sbjct 1724  CCTGTCATTCCCGAAGTGCCATAACTGTGGATTATATTTTCTACTCTGCAGAAAAGGAAGATGTTGCTGGGCAC  1797

Query  859  --------------------------------------------------------------------------  858
                                                                                      
Sbjct 1798  CCAGGAGCTGAAGTTGCTTTGGTTGGTGGCTTGAAACTTCTAGCTAGACTGTCACTTCTTACAGAACAAGACTT  1871

Query  859  --------------------------------------------------------------------------  858
                                                                                      
Sbjct 1872  ATGGACTGTTAATGGACTTCCAAACGAAAATAACTCTTCAGATCATCTGCCTTTATTGGCAAAGTTCAGACTTG  1945

Query  859  --------------------------------------------------------------------------  858
                                                                                      
Sbjct 1946  AGCTCTGACTCTCTTTGATCACATACTAATTTTCTTTCCAATTTGTATTGTTTTTCAAAGAATGTAAAGTTCTT  2019

Query  859  --------------------------------------------------------------------------  858
                                                                                      
Sbjct 2020  AAGTGTATGCATGTTGTTTATTTTTGCACTGTGGAGATTCTGAAGCGGTTATGTTAGATGCTTTGAAACTCCAT  2093

Query  859  --------------------------------------------------------------------------  858
                                                                                      
Sbjct 2094  ATCAGAAGAAATAACTTTATAACAATTTTTTTTAATAATGAAAAATATTTTCGTGACAAGTGAGCTCTAAATTC  2167

Query  859  --------------------------------------------------------------------------  858
                                                                                      
Sbjct 2168  TCTTTATTGTAAAAGAGATGTAAAGGTTTTATATTCTAAATCCTAGTAAAATTGACAGTGATTTTTAAATATAA  2241

Query  859  --------------------------------------------------------------------------  858
                                                                                      
Sbjct 2242  TGCATCTTCCTTTGTCTGCTTAGTAAAAAATTTCATTTCATAATTTTGGCAAGCTCTGTAGTGGATCCAAAGTA  2315

Query  859  --------------------------------------------------------------------------  858
                                                                                      
Sbjct 2316  TCTTTGAGTTCTTGCAAACTACAAGTTGTTTCCTTTCCAGAAGGCTTGATTTCATTAGGAGACCCCTCTATTGA  2389

Query  859  --------------------------------------------------------------------------  858
                                                                                      
Sbjct 2390  GTTCTAAATAGTTTATCTTAGAAAGCCTTGGGTCATTCACAGGTATCCAACCAGCCATTGTTTAGTTTGTTTTT  2463

Query  859  --------------------------------------------------------------------------  858
                                                                                      
Sbjct 2464  GAAGGGGTTTGATAATGCTTTTTAAGTTGTACAGAATGCTTAATCCATCTTATTACTGTCCTGAGCCATGTAAT  2537

Query  859  --------------------------------------------------------------------------  858
                                                                                      
Sbjct 2538  ATGCCTGCATCGTGTTGGGGAAATGTTTGGGAAATATAAGCCAGCATAACGTGTAAAGCTCACTCTTTCACCCT  2611

Query  859  --------------------------------------------------------------------------  858
                                                                                      
Sbjct 2612  GGAACAGACAAGAGGTGGGCTTAATAGAGGCAGAGACTGGGGATATACCTTTGTTTCCCTAGCATTTTTATTTA  2685

Query  859  --------------------------------------------------------------------------  858
                                                                                      
Sbjct 2686  TTTATTTTTATTTTATTTTATTTTTTGAGATGGAGTTTCACTCTTGTTGCCCAGGCTGGGGGTGCAATGGCGCA  2759

Query  859  --------------------------------------------------------------------------  858
                                                                                      
Sbjct 2760  ATCTTTGCTCACTGCAACCCCTGCCTCCCGGGCTCAAGCGATTCTCCTGCCTCAGCCTCTCGAGTAGCTGGGAT  2833

Query  859  --------------------------------------------------------------------------  858
                                                                                      
Sbjct 2834  TACAGGCATGCGTCACCACTCCCAGCTAATTTTGTATTTTCAGTAGAGACAGGGTTTCCCCATGTTGGTTAGGC  2907

Query  859  --------------------------------------------------------------------------  858
                                                                                      
Sbjct 2908  TGGTCTCGAACTCCCAACCTCAGGTGATCCGCCCACCTCAGCTCTCAAAGTGCTGGGATTACAGGCGGGAGCCA  2981

Query  859  --------------------------------------------------------------------------  858
                                                                                      
Sbjct 2982  CTGCACATGGCAGCATTTTTTAAAAATTCAGTTTTAAGATCTCTGGTTTAGGGGAGAGATTTTATTTTACTGAA  3055

Query  859  --------------------------------------------------------------------------  858
                                                                                      
Sbjct 3056  CCAGTTCTATAGAAATTTATTTTATTAGGAAATTTGTCTTTGGAACAAAGTGGCAGCTATAAAATTATTTTTGT  3129

Query  859  --------------------------------------------------------------------------  858
                                                                                      
Sbjct 3130  TAAGCCTCAGAAATATGAGGAAGCCTGTAAAACTCTAGTGGGGAGATATTAACTTGGAGACCTAATGCTCTGTA  3203

Query  859  --------------------------------------------------------------------------  858
                                                                                      
Sbjct 3204  AATAGTCATTTAAACTGTTGGTTTTAGTGGTTTTGTTTCTAAAATGTTTTCTTTTACCGTGATGCACCAGTATG  3277

Query  859  --------------------------------------------------------------------------  858
                                                                                      
Sbjct 3278  AGATGGTGCTGACACTTTCTATGAAGTGGTTATGAGCAGGTTTAATAAATCCTCTATACAAGTGTTTGAATCAA  3351

Query  859  --------------------------------------------------------------------------  858
                                                                                      
Sbjct 3352  TTTTAAAACATAAAAAGTGGAAATTTCCTTTTTTGTAGACAGTAGGAACAAGGAATTATATGCATTTTTACTAA  3425

Query  859  --------------------------------------------------------------------------  858
                                                                                      
Sbjct 3426  GTAGTAATTTTACACTGAATTGTAAATGTTTTTACAGTGAGTTTTATTAATAGAATGCTTCACCTTAAATTGGA  3499

Query  859  --------------------------------------------------------------------------  858
                                                                                      
Sbjct 3500  AAACAATAATAGTCTTGGACTAAGTCTTTGTACTAAAGCATTTGCTATAATTATTTTTAAAAAAACAAACAGAT  3573

Query  859  --------------------------------------------------------------------------  858
                                                                                      
Sbjct 3574  GAAAACCTCAGAGAAGGCATGTGGATTATAAGATTTGTCTAGTAAAAATTGTAATTGAATATGTTTAAATATTT  3647

Query  859  --------------------------------------------------------------------------  858
                                                                                      
Sbjct 3648  AATTTCTCATTTTGGGGGGTTTTTATTTTTTTATTTTTTAGATGGTGTCTCACGCTATCGCCCAGGCTGGAGTG  3721

Query  859  --------------------------------------------------------------------------  858
                                                                                      
Sbjct 3722  CAGTGGCGCGAACTCGGCTCACTGCAACCTCCGCCTCCTGGGTTCAAGCAATTCTCCTTCCTCAGCCTCCCAAG  3795

Query  859  --------------------------------------------------------------------------  858
                                                                                      
Sbjct 3796  TAGCTGGGATTACAGGCATGCACCACCATGCCCAGCTAATTTTTGTATTTTTAGTAGAGATGGAATTTTGCCAT  3869

Query  859  --------------------------------------------------------------------------  858
                                                                                      
Sbjct 3870  GTTGGCCAGGCTGGTCTTGAACTCCTGACCTCAGGGGTGATCCACCCGCCTCGGGCTCCCAAAGTGCTGTGATT  3943

Query  859  --------------------------------------------------------------------------  858
                                                                                      
Sbjct 3944  ACAGGCATGAGCCACCATGCCTGGCCTTTGGGGGGATTTTAATTACAGTATTAATTATAGTTCTAGGATTTCCC  4017

Query  859  --------------------------------------------------------------------------  858
                                                                                      
Sbjct 4018  ACATTTTATAGTAGTAGTTTGCAGGATATTATGTGCCCTAATTAGCAGATATAGACATTATCAAATTATAATGA  4091

Query  859  --------------------------------------------------------------------------  858
                                                                                      
Sbjct 4092  TAGTATAATTATCCCTTTTTAATATTGGGGAAAGAAAAATGAAAATTCATTAGTTAATTACTGCTTTGTGTTGT  4165

Query  859  --------------------------------------------------------------------------  858
                                                                                      
Sbjct 4166  GTGAATTTATTAACAAATAACATTATTACATATAGGTCATTGTTAACAAACAAACATCCCTGAAAACCTCTGTG  4239

Query  859  --------------------------------------------------------------------------  858
                                                                                      
Sbjct 4240  AAAATTTAATTTTTTATATCCTGATTAATATATTGTGACTTTAGGCCCATTTTTCATGTGCTTCACTTTGATAG  4313

Query  859  --------------------------------------------------------------------------  858
                                                                                      
Sbjct 4314  AGTTAATCCATAAAATTGCTCTTTACTTTAGCTTATCAAATGAAGTATTATTTTGTGGACTGGAGGCCAAAAAG  4387

Query  859  --------------------------------------------------------------------------  858
                                                                                      
Sbjct 4388  TCAATGTGAGCTTCTCACAGGTTTTTAAAGCTCCACTAAAAATAATTATCCACTTGTCTTTACTTTTGTTGACC  4461

Query  859  --------------------------------------------------------------------------  858
                                                                                      
Sbjct 4462  AGAATAGTTGGTAACTCTGCCAGAGCCTGTACTTACCTGCCAAAAACAATTAAATCTGGTTAATGCCTGAAACC  4535

Query  859  --------------------------------------------------------------------------  858
                                                                                      
Sbjct 4536  AAATCTCTCAGTCTCAAGTGTTATACTATCCAAGTTTTAAATGGAAAGGTAAACTGTGGAGTAATGAAATTTTG  4609

Query  859  --------------------------------------------------------------------------  858
                                                                                      
Sbjct 4610  GTTTTACTGTACCTTTTGCTATCAAGATAATATTCATGTTTGAAATCTTGTCTTTATTTGGAATTTAGTTACTG  4683

Query  859  --------------------------------------------------------------------------  858
                                                                                      
Sbjct 4684  TCTGCTTTTAACCTTTGCTTTCCTAAAGAAAGTTTGAGATCCAGAGAGTTCAAGGGATTGGGGAAAGAGAGGCG  4757

Query  859  -------------------------------------------------------  858
                                                                   
Sbjct 4758  TCAAGTCATTTGCACTTTGTACCTGTAAGTTAGGTAATAAACTATTATACTCGTA  4812

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