Nucleotide Global Alignment
Description
- Query:
- TRCN0000465557
- Subject:
- XR_001737531.1
- Aligned Length:
- 4939
- Identities:
- 731
- Gaps:
- 4208
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 TCAGGGACTCTGACTGCGCAAGATGGAGTGTAGGCCGGCCGGCGAGACTGCACCTCCCAGCATGCCTTGCAGCC 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 AGGACTGGAGTCGGTACTTAAGAGTGATGGGGTTCCCTAGATACTTTAGGCCGTCGCATCGATTATAGAGATTG 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 AGGTGGAACCCGGGGCCTGGGAACTGGACGCACGCGGAGGGCGAAGATGGAAGCCTGGCGCTGTGTGAGGAAGG 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 GCTACGGCCACTGTGTGGTGGGAAGAGGCCGATACCCCATGTTTCCCCATCACTCGAGGAGTCTGGGCAGAGAC 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 TGGACTACACCGTGGGAGAATCTGCAAAGGTGTTGCTGGAACAGACATATTTCTAGTTGTATGAGGTGGCCTGG 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 ACATTACTCTCGAGCTCCTTACCCATACTTCAGTAGTAGGCATTTTTCACTAAATTGGAGACCACCCTGTTTGT 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 TTGAGTCTAGAACTCAGTTCCAGTACTGTAACTGGAGACCTGACAACCTGAGCCAGACATCTTTGATTCATCTC 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 TCTAGTTACGTCATGAACGCTGAGGGAGATGAGCCTTCATCAAAACGAAGAAAACACCAAGGTGTTGTGAATAA 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 GGAAAATGCTCTTCGTTAAGCCATATTTGTGACTTCCGATATTTCACTAATACTTTTCAATCAAGAAAACAGCA 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 TTGCTAACTTGCCTATCACTTTAAAGTGGTATTTGAAGGATTTGTGTGATACAATTATGACTTTGTAATTAGGC 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 ACCCTAAAAACCTGATCAGGCCTATTGCTTACTTTCTTTGATTCATCTGTCTTCTCTGCTGTGATCACCTTGTT 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 CCTCCTGATATGGAAGGTGTGATAAAGCGGAATTGGGAATATATATGTAGCCATGATAAAGAAAAAACGAAGAT 888
Query 1 ----------------------------------------------------------------ATGTCCTATA 10
||||||||||
Sbjct 889 CCTAGGAGACAAAAATGTTGATCCCAAATGTGAAGACAGTGAGAACAAGTTTGACTTTTCAGTGATGTCCTATA 962
Query 11 ATATACTTTCACAAGATTTACTGGAAGATAACTCTCACCTTTATAGACATTGCCGGCGGCCAGTATTACACTGG 84
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 963 ATATACTTTCACAAGATTTACTGGAAGATAACTCTCACCTTTATAGACATTGCCGGCGGCCAGTATTACACTGG 1036
Query 85 AGTTTTAGGTTTCCCAATATTCTGAAAGAAATTAAACATTTTGATGCAGACGTACTTTGTTTGCAAGAAGTTCA 158
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037 AGTTTTAGGTTTCCCAATATTCTGAAAGAAATTAAACATTTTGATGCAGACGTACTTTGTTTGCAAGAAGTTCA 1110
Query 159 AGAAGATCATTATGGAGCAGAGATCAGGCCAAGTTTGGAATCACTGGGTTATCACTGTGAATATAAGATGCGGA 232
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1111 AGAAGATCATTATGGAGCAGAGATCAGGCCAAGTTTGGAATCACTGGGTTATCACTGTGAATATAAGATGCGGA 1184
Query 233 CAGGAAGGAAACCTGATGGCTGTGCTATTTGCTTCAAACATTCCAAATTTTCACTCTTGTCAGTGAACCCAGTG 306
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1185 CAGGAAGGAAACCTGATGGCTGTGCTATTTGCTTCAAACATTCCAAATTTTCACTCTTGTCAGTGAACCCAGTG 1258
Query 307 GAATTCTTCCGCCCTGATATTTCTCTGTTGGACAGAGACAATGTTGGATTAGTTTTACTCTTACAGCCCAAAAT 380
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1259 GAATTCTTCCGCCCTGATATTTCTCTGTTGGACAGAGACAATGTTGGATTAGTTTTACTCTTACAGCCCAAAAT 1332
Query 381 TCCATATGCTGCCTGCCCTGCAATCTGCGTAGCAAATACGCATCTGTTGTATAATCCAAGGCGAGGTGATATTA 454
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1333 TCCATATGCTGCCTGCCCTGCAATCTGCGTAGCAAATACGCATCTGTTGTATAATCCAAGGCGAGGTGATATTA 1406
Query 455 AGCTGACGCAATTGGCAATGCTACTGGCAGAGATTTCCAGTGTTGCCCACCAGAAAGATGGCAGCTTCTGCCCT 528
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1407 AGCTGACGCAATTGGCAATGCTACTGGCAGAGATTTCCAGTGTTGCCCACCAGAAAGATGGCAGCTTCTGCCCT 1480
Query 529 ATTGTTATGTGTGGTGACTTTAATTCTGTTCCTGGTTCTCCACTATATAGTTTCATAAAGGAAGGAAAATTGAA 602
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1481 ATTGTTATGTGTGGTGACTTTAATTCTGTTCCTGGTTCTCCACTATATAGTTTCATAAAGGAAGGAAAATTGAA 1554
Query 603 TTATGAAGGACTTCCCATAGGAAAGGTATCTGGCCAGGAACAGTCTTCACGGGGACAAAGAATTTTATCTATTC 676
|||||||||||||||||||||||
Sbjct 1555 TTATGAAGGACTTCCCATAGGAA--------------------------------------------------- 1577
Query 677 CAATTTGGCCCCCAAACCTAGGTATCTCACAGAACTGTGTGTATGAGGTACAGCAGGTACCAAAAGTAGAAAAG 750
Sbjct 1578 -------------------------------------------------------------------------- 1577
Query 751 ACAGACAGTGATCTGACACAAACACAGCTGAAGCAAACAGAGGTCCTAGTGACAGCTGAAAAATTGTCTTCAAA 824
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1578 --AGACAGTGATCTGACACAAACACAGCTGAAGCAAACAGAGGTCCTAGTGACAGCTGAAAAATTGTCTTCAAA 1649
Query 825 TTTACAGCACCATTTCAGTTTGTCATCTGTTTAT---------------------------------------- 858
||||||||||||||||||||||||||||||||||
Sbjct 1650 TTTACAGCACCATTTCAGTTTGTCATCTGTTTATTCACATTACTTTCCTGACACTGGAATTCCAGAAGTGACCA 1723
Query 859 -------------------------------------------------------------------------- 858
Sbjct 1724 CCTGTCATTCCCGAAGTGCCATAACTGTGGATTATATTTTCTACTCTGCAGAAAAGGAAGATGTTGCTGGGCAC 1797
Query 859 -------------------------------------------------------------------------- 858
Sbjct 1798 CCAGGAGCTGAAGTTGCTTTGGTTGGTGGCTTGAAACTTCTAGCTAGACTGTCACTTCTTACAGAACAAGACTT 1871
Query 859 -------------------------------------------------------------------------- 858
Sbjct 1872 ATGGACTGTTAATGGACTTCCAAACGAAAATAACTCTTCAGATCATCTGCCTTTATTGGCAAAGTTCAGACTTG 1945
Query 859 -------------------------------------------------------------------------- 858
Sbjct 1946 AGCTCTGACTCTCTTTGATCACATACTAATTTTCTTTCCAATTTGTATTGTTTTTCAAAGAATGTAAAGTTCTT 2019
Query 859 -------------------------------------------------------------------------- 858
Sbjct 2020 AAGTGTATGCATGTTGTTTATTTTTGCACTGTGGAGATTCTGAAGCGGTTATGTTAGATGCTTTGAAACTCCAT 2093
Query 859 -------------------------------------------------------------------------- 858
Sbjct 2094 ATCAGAAGAAATAACTTTATAACAATTTTTTTTAATAATGAAAAATATTTTCGTGACAAGTGAGCTCTAAATTC 2167
Query 859 -------------------------------------------------------------------------- 858
Sbjct 2168 TCTTTATTGTAAAAGAGATGTAAAGGTTTTATATTCTAAATCCTAGTAAAATTGACAGTGATTTTTAAATATAA 2241
Query 859 -------------------------------------------------------------------------- 858
Sbjct 2242 TGCATCTTCCTTTGTCTGCTTAGTAAAAAATTTCATTTCATAATTTTGGCAAGCTCTGTAGTGGATCCAAAGTA 2315
Query 859 -------------------------------------------------------------------------- 858
Sbjct 2316 TCTTTGAGTTCTTGCAAACTACAAGTTGTTTCCTTTCCAGAAGGCTTGATTTCATTAGGAGACCCCTCTATTGA 2389
Query 859 -------------------------------------------------------------------------- 858
Sbjct 2390 GTTCTAAATAGTTTATCTTAGAAAGCCTTGGGTCATTCACAGGTATCCAACCAGCCATTGTTTAGTTTGTTTTT 2463
Query 859 -------------------------------------------------------------------------- 858
Sbjct 2464 GAAGGGGTTTGATAATGCTTTTTAAGTTGTACAGAATGCTTAATCCATCTTATTACTGTCCTGAGCCATGTAAT 2537
Query 859 -------------------------------------------------------------------------- 858
Sbjct 2538 ATGCCTGCATCGTGTTGGGGAAATGTTTGGGAAATATAAGCCAGCATAACGTGTAAAGCTCACTCTTTCACCCT 2611
Query 859 -------------------------------------------------------------------------- 858
Sbjct 2612 GGAACAGACAAGAGGTGGGCTTAATAGAGGCAGAGACTGGGGATATACCTTTGTTTCCCTAGCATTTTTATTTA 2685
Query 859 -------------------------------------------------------------------------- 858
Sbjct 2686 TTTATTTTTATTTTATTTTATTTTTTGAGATGGAGTTTCACTCTTGTTGCCCAGGCTGGGGGTGCAATGGCGCA 2759
Query 859 -------------------------------------------------------------------------- 858
Sbjct 2760 ATCTTTGCTCACTGCAACCCCTGCCTCCCGGGCTCAAGCGATTCTCCTGCCTCAGCCTCTCGAGTAGCTGGGAT 2833
Query 859 -------------------------------------------------------------------------- 858
Sbjct 2834 TACAGGCATGCGTCACCACTCCCAGCTAATTTTGTATTTTCAGTAGAGACAGGGTTTCCCCATGTTGGTTAGGC 2907
Query 859 -------------------------------------------------------------------------- 858
Sbjct 2908 TGGTCTCGAACTCCCAACCTCAGGTGATCCGCCCACCTCAGCTCTCAAAGTGCTGGGATTACAGGCGGGAGCCA 2981
Query 859 -------------------------------------------------------------------------- 858
Sbjct 2982 CTGCACATGGCAGCATTTTTTAAAAATTCAGTTTTAAGATCTCTGGTTTAGGGGAGAGATTTTATTTTACTGAA 3055
Query 859 -------------------------------------------------------------------------- 858
Sbjct 3056 CCAGTTCTATAGAAATTTATTTTATTAGGAAATTTGTCTTTGGAACAAAGTGGCAGCTATAAAATTATTTTTGT 3129
Query 859 -------------------------------------------------------------------------- 858
Sbjct 3130 TAAGCCTCAGAAATATGAGGAAGCCTGTAAAACTCTAGTGGGGAGATATTAACTTGGAGACCTAATGCTCTGTA 3203
Query 859 -------------------------------------------------------------------------- 858
Sbjct 3204 AATAGTCATTTAAACTGTTGGTTTTAGTGGTTTTGTTTCTAAAATGTTTTCTTTTACCGTGATGCACCAGTATG 3277
Query 859 -------------------------------------------------------------------------- 858
Sbjct 3278 AGATGGTGCTGACACTTTCTATGAAGTGGTTATGAGCAGGTTTAATAAATCCTCTATACAAGTGTTTGAATCAA 3351
Query 859 -------------------------------------------------------------------------- 858
Sbjct 3352 TTTTAAAACATAAAAAGTGGAAATTTCCTTTTTTGTAGACAGTAGGAACAAGGAATTATATGCATTTTTACTAA 3425
Query 859 -------------------------------------------------------------------------- 858
Sbjct 3426 GTAGTAATTTTACACTGAATTGTAAATGTTTTTACAGTGAGTTTTATTAATAGAATGCTTCACCTTAAATTGGA 3499
Query 859 -------------------------------------------------------------------------- 858
Sbjct 3500 AAACAATAATAGTCTTGGACTAAGTCTTTGTACTAAAGCATTTGCTATAATTATTTTTAAAAAAACAAACAGAT 3573
Query 859 -------------------------------------------------------------------------- 858
Sbjct 3574 GAAAACCTCAGAGAAGGCATGTGGATTATAAGATTTGTCTAGTAAAAATTGTAATTGAATATGTTTAAATATTT 3647
Query 859 -------------------------------------------------------------------------- 858
Sbjct 3648 AATTTCTCATTTTGGGGGGTTTTTATTTTTTTATTTTTTAGATGGTGTCTCACGCTATCGCCCAGGCTGGAGTG 3721
Query 859 -------------------------------------------------------------------------- 858
Sbjct 3722 CAGTGGCGCGAACTCGGCTCACTGCAACCTCCGCCTCCTGGGTTCAAGCAATTCTCCTTCCTCAGCCTCCCAAG 3795
Query 859 -------------------------------------------------------------------------- 858
Sbjct 3796 TAGCTGGGATTACAGGCATGCACCACCATGCCCAGCTAATTTTTGTATTTTTAGTAGAGATGGAATTTTGCCAT 3869
Query 859 -------------------------------------------------------------------------- 858
Sbjct 3870 GTTGGCCAGGCTGGTCTTGAACTCCTGACCTCAGGGGTGATCCACCCGCCTCGGGCTCCCAAAGTGCTGTGATT 3943
Query 859 -------------------------------------------------------------------------- 858
Sbjct 3944 ACAGGCATGAGCCACCATGCCTGGCCTTTGGGGGGATTTTAATTACAGTATTAATTATAGTTCTAGGATTTCCC 4017
Query 859 -------------------------------------------------------------------------- 858
Sbjct 4018 ACATTTTATAGTAGTAGTTTGCAGGATATTATGTGCCCTAATTAGCAGATATAGACATTATCAAATTATAATGA 4091
Query 859 -------------------------------------------------------------------------- 858
Sbjct 4092 TAGTATAATTATCCCTTTTTAATATTGGGGAAAGAAAAATGAAAATTCATTAGTTAATTACTGCTTTGTGTTGT 4165
Query 859 -------------------------------------------------------------------------- 858
Sbjct 4166 GTGAATTTATTAACAAATAACATTATTACATATAGGTCATTGTTAACAAACAAACATCCCTGAAAACCTCTGTG 4239
Query 859 -------------------------------------------------------------------------- 858
Sbjct 4240 AAAATTTAATTTTTTATATCCTGATTAATATATTGTGACTTTAGGCCCATTTTTCATGTGCTTCACTTTGATAG 4313
Query 859 -------------------------------------------------------------------------- 858
Sbjct 4314 AGTTAATCCATAAAATTGCTCTTTACTTTAGCTTATCAAATGAAGTATTATTTTGTGGACTGGAGGCCAAAAAG 4387
Query 859 -------------------------------------------------------------------------- 858
Sbjct 4388 TCAATGTGAGCTTCTCACAGGTTTTTAAAGCTCCACTAAAAATAATTATCCACTTGTCTTTACTTTTGTTGACC 4461
Query 859 -------------------------------------------------------------------------- 858
Sbjct 4462 AGAATAGTTGGTAACTCTGCCAGAGCCTGTACTTACCTGCCAAAAACAATTAAATCTGGTTAATGCCTGAAACC 4535
Query 859 -------------------------------------------------------------------------- 858
Sbjct 4536 AAATCTCTCAGTCTCAAGTGTTATACTATCCAAGTTTTAAATGGAAAGGTAAACTGTGGAGTAATGAAATTTTG 4609
Query 859 -------------------------------------------------------------------------- 858
Sbjct 4610 GTTTTACTGTACCTTTTGCTATCAAGATAATATTCATGTTTGAAATCTTGTCTTTATTTGGAATTTAGTTACTG 4683
Query 859 -------------------------------------------------------------------------- 858
Sbjct 4684 TCTGCTTTTAACCTTTGCTTTCCTAAAGAAAGTTTGAGATCCAGAGAGTTCAAGGGATTGGGGAAAGAGAGGCG 4757
Query 859 ------------------------------------------------------- 858
Sbjct 4758 TCAAGTCATTTGCACTTTGTACCTGTAAGTTAGGTAATAAACTATTATACTCGTA 4812
