Nucleotide Global Alignment
Description
- Query:
- TRCN0000465600
- Subject:
- XM_011529947.2
- Aligned Length:
- 3345
- Identities:
- 714
- Gaps:
- 2631
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGGCTGTGAGGCAGGCGGCGACGGCGGGCACTCCCGGGCCCAGGAGAGAGGAAGAGGCGGCGCTTCTATTCGA 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 GAGGGCCCATTACCGGCACGACCCGCGCTGGCTGCTGCCCGTGACCCCCCGCCTGTGCCTGGCCTGCGCGCTGG 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 AGCTGCTGCCGGACCCCGGCGTGTCGTTAGTGCGCAAGAAGCACATGTTGTCCTGCTTCCAAGATGCCCTTGTG 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 AGGCATACCTCCCTGGTCACGCAACTGGTGTCTCAGGATCAGAGAGTCTGCATCCACTTCATAAGTGTGCTTTT 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 TGGACTATTATGCAGCATGGAAGATGGGAGTGTGACAGACCTCTGTATTGAAGTCCTTATTCAGATCACAACGC 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 AGCTGAAGCTGGAGCAGACTATCCGTTGCCTGCTGGATGAGTGCCACAAAGAGCTGTGTAACATGCCCTCCATG 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 CGAGGCAGCCTGGCCACCCTGACCCTTCTTGGCAAGTTGGTGGATGCCATCCCTGCTCTGGCAGACGAGCTTGT 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 AATGGAGCATGGCAACCTGATGGAGCATCTGTTGAGAGGCTTAGTATACCCCAGTGAGGGCATACAAGCTTCTG 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 TCTGTTACCTTTATGGGAAGCTATACTCCTCACCAGTGGCAGCTGAGATGCTTTCAGGACACTTCCGTGAGAAG 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 CTTTTTCCCCTCTTCCTTTCCATCCTGGATGGTGCCCAGACAAAGGAGCTGCAGATTAACTGCTTGGGTTTGCT 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 GAGGCAGCTGTTGAAGTATGATCTCTTTGTGTCCATGATCATGAACCAGGATGGACTGGGAGAAAGTGCTAAGA 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 ATATCGAAGGGTCATCAGGAAATACCTCACTGCCTTTGGTGCTCAAAAAGCTTCTCCTCTCTAGAGATGAAACC 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 CTGCAGGTGGCCAGTGCTCACTGTATAACTGCGGTGCTTGTCCACTCCCCAGCAAAGCATGCGTCAGCCTTCAT 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 CCACGCTGACATCCCAGAGTTCCTCTTTGAGCATCTTTCTTCTTCCAGTGAAGTGCTCGTCTGGTCCAGCTGTA 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 ACTGCTTGACACTCCTGGTAGAAGAGCCACTCTTTTTTTCCAAGTGCCACACGGTGTATGGGATCGAGGCAGTG 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 GTGAGGAGCCTGCAGGGAAGCCTGAAGATGAACAACATAGAGCTGCACAAGCAGGGCCTGCTGCTTTTCGCTGA 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 AATCCTGACCCGGCAGCCAGAGGAGATCAAGCTGTTCACAAGCTCAGCCATGTGCAGAGATGCTGGCCGTGCCC 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 TCCAAGAAGCAGTTAGCAGCCCTGTGCTGGAGGTGGCTGCTGAGGCCTTGAAGGCCACTTCTGCTTTTCTGAGT 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 CACTCAGCCCTAAACCAGGTGTGTTCCAATTTCCTCTACTATATGTGCCTCAACCTTCTCTCAGCTCCAGAGAA 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 GACAGGACCACCTTCCAAAGAAGAACTCTCTGCAGTGTCTGAGCTCCTGCAGCATGGGCTGCCCCAGATAAGCA 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 GCAGGAGCCCTGAAAGCCTTGCCTTCCTGTCTGATCGCCAGTACATGGAGGGAGCTGCTCGCCAGAGACAGTAC 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 TGCATCCTGCTCCTCTTCTACTTGGCCTACATCCATGAAGACAGGTTTGTCTCAGAGGCAGAGTTATTTGAGGC 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 TGTGCAAAGCTTCCTCCTGTCGCTGCAGGACCAGGGCGAGCGCCCCCCACTGGTGGTCTTCAAAGCCTCCATCT 1702
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1703 ATCTGCTTGCAATCTGCCAGGACAAAGACAATACACTACGTGAGACTATGGTCAGTGCAATCAGAAAATTCCTA 1776
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1777 GAAGGCATCCCAGACCTGCAGCTAGTCTATACTCACCATCCGCTCCTGCTCAGGTTCTTTCTGTTGTATCCAGA 1850
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1851 GCTCATGAGTAGGTATGGGCACCGTGTCCTGGAACTTTGGTTCTTCTGGGAAGAGAGCAGCTATGAGGAACTGG 1924
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1925 ATGATGTCACCTCTGCTGGGCAGCCCGCCCTTCCTGCCAGCTTAGTAGTCCTGTTCCAGTTGCTCAGAAGCATC 1998
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1999 CCCAGCATCCTGCTCATCTTGCTGGACCTCATCTATTCCAGCCCAGTGGACACAGCTCACAAGGTACTGATTAG 2072
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2073 CCTGAGGACCTTCCTGAGGAGGAATGAGGATATCCAAGTGGGCGGTCTTATCCGAGGCCACTTCCTGCTGATCC 2146
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2147 TGCAGCGTCTGCTAGTGGAGCATGGGGCATCCCCATCAGGAGCCTCGGGGAACCTACCATTGCTGCTGAGCCTC 2220
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2221 CTCTCCCTGATGCAGCTCAGGAATGTGTCAGAGCAAGAACTGGACAGCGTGGCCATGAAGCTCCTTCACCAAGT 2294
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2295 AAGCAAGCTGTGTGGGAAGTGCAGCCCCACTGACGTGGACATCCTGCAGCCCTCCTTCAACTTCCTGTATTGGA 2368
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2369 GCCTTCATCAGACCACACCCAGCAGTCAGAAAAGAGCTGCTGCAGTGCTCCTGAGCAGCACAGGCCTGATGGAG 2442
Query 1 ------------ATGCTGGCCCTCACCTTGGCAAAGGCAGATTCTCCCAGGACTGCACTCCTCTGCTCTGCCTG 62
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2443 CTTCTGGAGAAGATGCTGGCCCTCACCTTGGCAAAGGCAGATTCTCCCAGGACTGCACTCCTCTGCTCTGCCTG 2516
Query 63 GCTGCTCACTGCCTCCTTCTCTGCCCAGCAGCACAAGGGCAGTTTG---------------------------- 108
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2517 GCTGCTCACTGCCTCCTTCTCTGCCCAGCAGCACAAGGGCAGTTTGCAGGCTTCCAGAACATGGGGGTTAGCCC 2590
Query 109 -----------------CAGGTTCACCAGACACTCTCTGTGGAAATGGACCAAGTATTGAAGGCTCTCAGCTTT 165
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2591 TTTACCCTGTGCCCTGCCAGGTTCACCAGACACTCTCTGTGGAAATGGACCAAGTATTGAAGGCTCTCAGCTTT 2664
Query 166 CCAAAGAAAAAGGCTGCACTACTCTCAGCTGCCATCTTATGCTTCCTGCGGACAGCCCTGCGACAAAGCTTTTC 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2665 CCAAAGAAAAAGGCTGCACTACTCTCAGCTGCCATCTTATGCTTCCTGCGGACAGCCCTGCGACAAAGCTTTTC 2738
Query 240 CTCTGCCCTGGTAGCCCTGGTGCCCTCAGGGGCCCAGCCACTGCCAGCCACCAAGGACACTGTCCTAGCTCCAC 313
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2739 CTCTGCCCTGGTAGCCCTGGTGCCCTCAGGGGCCCAGCCACTGCCAGCCACCAAGGACACTGTCCTAGCTCCAC 2812
Query 314 TGCGAATGTCGCAAGTCCGGTCCCTGGTCATTGGGCTGCAGAACCTCCTGGTGCAGAAGGACCCTCTATTGTCC 387
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2813 TGCGAATGTCGCAAGTCCGGTCCCTGGTCATTGGGCTGCAGAACCTCCTGGTGCAGAAGGACCCTCTATTGTCC 2886
Query 388 CAGGCCTGTGTTGGCTGCCTGGAGGCCTTGCTTGACTACCTGGATGCCCGGAGCCCAGACATTGCTCTCCACGT 461
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2887 CAGGCCTGTGTTGGCTGCCTGGAGGCCTTGCTTGACTACCTGGATGCCCGGAGCCCAGACATTGCTCTCCACGT 2960
Query 462 GGCCTCCCAGCCTTGGAATCGGTTTTTGCTGTTTACCCTCTTGGATGCTGGAGAGAATTCCTTCCTCAGACCTG 535
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2961 GGCCTCCCAGCCTTGGAATCGGTTTTTGCTGTTTACCCTCTTGGATGCTGGAGAGAATTCCTTCCTCAGACCTG 3034
Query 536 AGATTTTGAGGCTCATGACCCT---------------------------------------------------- 557
||||||||||||||||||||||
Sbjct 3035 AGATTTTGAGGCTCATGACCCTGTTTATGCGGTACCGGAGTAGCAGTGTCCTCTCTCATGAAGAGGTGGGTGAT 3108
Query 558 -------------------------------------------------------------------------- 557
Sbjct 3109 GTTCTGCAAGGTGTGGCTTTGGCTGACCTGTCTACCCTCTCGAACACCACACTCCAGGCCCTGCATGGCTTCTT 3182
Query 558 ------GCTCCAGAGCATGGGACACCTGGCTGACCACAGCATGGCCCAGACCCTGCAGGCCTCCTTGGAGGGCC 625
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3183 CCAGCAGCTCCAGAGCATGGGACACCTGGCTGACCACAGCATGGCCCAGACCCTGCAGGCCTCCTTGGAGGGCC 3256
Query 626 TTCCCCCTAGCACCTCCTCAGGCCAGCCACCCCTGCAGGACATGCTCTGCCTGGGAGGGGTGGCTGTATCCCTG 699
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3257 TTCCCCCTAGCACCTCCTCAGGCCAGCCACCCCTGCAGGACATGCTCTGCCTGGGAGGGGTGGCTGTATCCCTG 3330
Query 700 TCCCACATCAGAAAC 714
|||||||||||||||
Sbjct 3331 TCCCACATCAGAAAC 3345
