Nucleotide Global Alignment
Description
- Query:
- TRCN0000465646
- Subject:
- XM_017018710.2
- Aligned Length:
- 3719
- Identities:
- 1708
- Gaps:
- 1993
Alignment
Query 1 ATGAGACTGTTCGTGAGTGATGGCGTCCCGGGTTGCTTGCCGGTGCTGGCCGCCGCCGGGAGAGCCCGGGGCAG 74
Sbjct 1 -------------------------------------------------------------------------- 0
Query 75 AGCAGAGGTGCTCATCAGCACTGTAGGCCCGGAAGATTGTGTGGTCCCGTTCCTGACCCGGCCTAAGGTCCCTG 148
Sbjct 1 -------------------------------------------------------------------------- 0
Query 149 TCTTGCAGCTGGATAGCGGCAACTACCTCTTCTCCACTAGTGCAATCTGCCGATATTTTTTTTTGTTATCTGGC 222
Sbjct 1 -------------------------------------------------------------------------- 0
Query 223 TGGGAGCAAGATGACCTCACTAACCAGTGGCTGGAATGGGAAGCGACAGAGCTGCAGCCAGCTTTGTCTGCTGC 296
Sbjct 1 -------------------------------------------------------------------------- 0
Query 297 CCTGTACTATTTAGTGGTCCAAGGCAAGAAGGGGGAAGATGTTCTTGGTTCAGTGCGGAGAGCCCTGACTCACA 370
Sbjct 1 -------------------------------------------------------------------------- 0
Query 371 TTGACCACAGCTTGAGTCGTCAGAACTGTCCTTTCCTGGCTGGGGAGACAGAATCTCTAGCCGACATTGTTTTG 444
Sbjct 1 -------------------------------------------------------------------------- 0
Query 445 TGGGGAGCCCTATACCCATTACTGCAAGATCCCGCCTACCTCCCTGAGGAGCTGAGTGCCCTGCACAGCTGGTT 518
Sbjct 1 -------------------------------------------------------------------------- 0
Query 519 CCAGACACTGAGTACCCAGGAACCATGTCAGCGAGCTGCAGAGACTGTACTGAAACAGCAAGGTGTCCTGGCTC 592
Sbjct 1 -------------------------------------------------------------------------- 0
Query 593 TCCGGCCTTACCTCCAAAAGCAGCCCCAGCCCAGCCCCGCTGAGGGAAGGGCTGTCACCAATGAGCCTGAGGAG 666
Sbjct 1 -------------------------------------------------------------------------- 0
Query 667 GAGGAGCTGGCTACCCTATCTGAGGAGGAGATTGCTATGGCTGTTACTGCTTGGGAGAAGGGCCTAGAAAGTTT 740
Sbjct 1 -------------------------------------------------------------------------- 0
Query 741 GCCCCCGCTGCGGCCCCAGCAGAATCCAGTGTTGCCTGTGGCTGGAGAAAGGAATGTGCTCATCACCAGTGCCC 814
Sbjct 1 -------------------------------------------------------------------------- 0
Query 815 TCCCTTACGTCAACAATGTCCCCCACCTTGGGAACATCATTGGTTGTGTGCTCAGTGCCGATGTCTTTGCCAGG 888
Sbjct 1 -------------------------------------------------------------------------- 0
Query 889 TACTCTCGCCTCCGCCAGTGGAACACCCTCTATCTGTGTGGGACAGATGAGTATGGTACAGCAACAGAGACCAA 962
Sbjct 1 -------------------------------------------------------------------------- 0
Query 963 GGCTCTGGAGGAGGGACTAACCCCCCAGGAGATCTGCGACAAGTACCACATCATCCATGCTGACATCTACCGCT 1036
Sbjct 1 -------------------------------------------------------------------------- 0
Query 1037 GGTTTAACATTTCGTTTGATATTTTTGGTCGCACCACCACTCCACAGCAGACCAAAATCACCCAGGACATTTTC 1110
Sbjct 1 -------------------------------------------------------------------------- 0
Query 1111 CAGCAGTTGCTGAAACGAGGTTTTGTGCTGCAAGATACTGTGGAGCAACTGCGATGTGAGCACTGTGCTCGCTT 1184
Sbjct 1 -------------------------------------------------------------------------- 0
Query 1185 CCTGGCTGACCGCTTCGTGGAGGGCGTGTGTCCCTTCTGTGGCTATGAGGAGGCTCGGGGTGACCAGTG---TG 1255
|| |.||| ||||||||| |
Sbjct 1 --------------------------------------------AT-----GCCTC----TGACCAGTGCCTT- 20
Query 1256 ACAAG--TGTGG-CAA---------GCTCATCAATGCTGTC--GAGCTTA-AGAAAATGGAGCTGGCGCTGGTG 1314
||.| ||||| ||| |.|||| |||| |||..|| |||||||||||||||||||||||
Sbjct 21 -CAGGGCTGTGGACAACGACCCTGGGATCAT------TGTCTGGAGAATAGAGAAAATGGAGCTGGCGCTGGTG 87
Query 1315 CCTGTGAGCGCCCACGGCAACTTCTATGAGGGGGACTGCTACGTCATCCTCTCGACCCGGAGAGTGGCCAGTCT 1388
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 88 CCTGTGAGCGCCCACGGCAACTTCTATGAGGGGGACTGCTACGTCATCCTCTCGACCCGGAGAGTGGCCAGTCT 161
Query 1389 CCTATCCCAGGACATCCACTTCTGGATCGGGAAGGACTCCTCCCAGGATGAGCAAAGCTGCGCAGCCATATATA 1462
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 162 CCTATCCCAGGACATCCACTTCTGGATCGGGAAGGACTCCTCCCAGGATGAGCAAAGCTGCGCAGCCATATATA 235
Query 1463 CCACACAGCTGGACGACTACCTGGGAGGCAGCCCTGTGCAGCACCGAGAGGTCCAGTACCATGAGTCAGACACT 1536
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 236 CCACACAGCTGGACGACTACCTGGGAGGCAGCCCTGTGCAGCACCGAGAGGTCCAGTACCATGAGTCAGACACT 309
Query 1537 TTCCGTGGCTACTTCAAGCAGGGCATCATCTACAAGCAGGGGGGTGTCGCCTCTGGGATGAAGCACGTGGAGAC 1610
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 310 TTCCGTGGCTACTTCAAGCAGGGCATCATCTACAAGCAGGGGGGTGTCGCCTCTGGGATGAAGCACGTGGAGAC 383
Query 1611 CAATACCTACGACGTGAAGCGGCTGCTACATGTGAAAGGGAAAAGAAACATCAGGGCTACCGAGGTGGAAATGA 1684
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 384 CAATACCTACGACGTGAAGCGGCTGCTACATGTGAAAGGGAAAAGAAACATCAGGGCTACCGAGGTGGAAATGA 457
Query 1685 GCTGGGACAGTTTCAACCGAGGTGATGTCTTCTTGCTGGACCTTGGGAAAGTCATCATCCAATGGAATGGCCCA 1758
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 458 GCTGGGACAGTTTCAACCGAGGTGATGTCTTCTTGCTGGACCTTGGGAAAGTCATCATCCAATGGAATGGCCCA 531
Query 1759 GAGAGCAACAGTGGGGAGCGCCTGAAGGCTATGCTTCTGGCAAAGGATATTCGAGACAGGGAGCGAGGGGGCCG 1832
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 532 GAGAGCAACAGTGGGGAGCGCCTGAAGGCTATGCTTCTGGCAAAGGATATTCGAGACAGGGAGCGAGGGGGCCG 605
Query 1833 TGCTGAAATAGGAGTGATCGAGGGAGACAAGGAGGCAGCCAGCCCAGAGCTGATGAAGGTCCTTCAGGACACCC 1906
||||.|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 606 TGCTAAAATAGGAGTGATCGAGGGAGACAAGGAGGCAGCCAGCCCAGAGCTGATGAAGGTCCTTCAGGACACCC 679
Query 1907 TTGGCCGACGCTCCATTATCAAGCCTACAGTCCCTGATGAGATCATAGATCAGAAGCAGAAATCAACTATCATG 1980
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 680 TTGGCCGACGCTCCATTATCAAGCCTACAGTCCCTGATGAGATCATAGATCAGAAGCAGAAATCAACTATCATG 753
Query 1981 TTGTATCATATCTCAGATTCAGCTGGGCAGCTGGCAGTCACAGAGGTAGCAACAAGGCCTCTGGTCCAGGACTT 2054
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 754 TTGTATCATATCTCAGATTCAGCTGGGCAGCTGGCAGTCACAGAGGTAGCAACAAGGCCTCTGGTCCAGGACTT 827
Query 2055 ACTGAACCATGATGACTGCTACATCCTGGACCAAAGTGGAACCAAAATCTACGTGTGGAAAGGAAAAGGAGCCA 2128
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 828 ACTGAACCATGATGACTGCTACATCCTGGACCAAAGTGGAACCAAAATCTACGTGTGGAAAGGAAAAGGAGCCA 901
Query 2129 CAAAGGCTGAAAAACAGGCAGCCATGTCTAAAGCGCTGGGCTTCATCAAGATGAAGAGCTACCCCAGCAGCACC 2202
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 902 CAAAGGCTGAAAAACAGGCAGCCATGTCTAAAGCGCTGGGCTTCATCAAGATGAAGAGCTACCCCAGCAGCACC 975
Query 2203 AATGTGGAGACCGTCAACGATGGTGCTGAGTCGGCCATGTTCAAGCAGCTGTTCCAGAAGTGGTCAGTAAAGGA 2276
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 976 AATGTGGAGACCGTCAACGATGGTGCTGAGTCGGCCATGTTCAAGCAGCTGTTCCAGAAGTGGTCAGTAAAGGA 1049
Query 2277 CCAGACCATGGGCCTGGGGAAAACGTTCAGCATTGGTAAAATTGCTAAAGTTTTCCAGGATAAATTTGATGTGA 2350
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1050 CCAGACCATGGGCCTGGGGAAAACGTTCAGCATTGGTAAAATTGCTAAAGTTTTCCAGGATAAATTTGATGTGA 1123
Query 2351 CTCTGCTACACACCAAGCCAGAGGTAGCTGCCCAGGAAAGAATGGTCGATGATGGCAACGGAAAAGTTGAGGTC 2424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1124 CTCTGCTACACACCAAGCCAGAGGTAGCTGCCCAGGAAAGAATGGTCGATGATGGCAACGGAAAAGTTGAGGTC 1197
Query 2425 TGGAGAATTGAGAACCTGGAGCTGGTCCCTGTGGAGTATCAATGGTATGGCTTCTTTTATGGGGGAGACTGTTA 2498
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1198 TGGAGAATTGAGAACCTGGAGCTGGTCCCTGTGGAGTATCAATGGTATGGCTTCTTTTATGGGGGAGACTGTTA 1271
Query 2499 TCTGGTCCTCTACACATACGAGGTAAATGGGAAGCCACATCACATCTTGTACATCTGGCAGGGCCGCCACGCCT 2572
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1272 TCTGGTCCTCTACACATACGAGGTAAATGGGAAGCCACATCACATCTTGTACATCTGGCAGGGCCGCCACGCCT 1345
Query 2573 CACAGGATGAGCTGGCAGCCTCAGCATACCAGGCAGTGGAGGTGGATCGGCAGTTTGATGGGGCTGCTGTGCAG 2646
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1346 CACAGGATGAGCTGGCAGCCTCAGCATACCAGGCAGTGGAGGTGGATCGGCAGTTTGATGGGGCTGCTGTGCAG 1419
Query 2647 GTTCGAGTCAGGATGGGAACGGAGCCACGCCACTTCATGGCCATCTTCAAAGGGAAGCTAGTTATCTTTGAGGG 2720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1420 GTTCGAGTCAGGATGGGAACGGAGCCACGCCACTTCATGGCCATCTTCAAAGGGAAGCTAGTTATCTTTGAGGG 1493
Query 2721 TGGGACTTCCAGGAAGGGAAATGCCGAGCCTGACCCTCCAGTAAGACTCTTCCAAATTCATGGAAATGACAAAT 2794
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1494 TGGGACTTCCAGGAAGGGAAATGCCGAGCCTGACCCTCCAGTAAGACTCTTCCAAATTCATGGAAATGACAAAT 1567
Query 2795 CTAACACCAAAGCAGTGGAAGTTCCAGCCTTTGCCTCCTCCCTAAACTCCAATGATGTCTTTCTGCTGCGAACT 2868
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1568 CTAACACCAAAGCAGTGGAAGTTCCAGCCTTTGCCTCCTCCCTAAACTCCAATGATGTCTTTCTGCTGCGAACT 1641
Query 2869 CAGGCAGAGCACTACCTGTGGTATGGCAAGG----TAG------------------------------------ 2902
||||||||||||||||||||||||||||||| |||
Sbjct 1642 CAGGCAGAGCACTACCTGTGGTATGGCAAGGGGTCTAGTGGGGATGAGCGGGCAATGGCTAAGGAGCTGGCCAG 1715
Query 2903 ----------GATGGCTG------------GGCCCCGGGTCAG--ACCAGCCCCTCGGAG--CCCAGACCTGC- 2949
||||||.| ||||..|||.||| .|||||| ||| |...|||||.|
Sbjct 1716 CCTTCTCTGTGATGGCAGCGAGAACACTGTGGCCGAGGGCCAGGAGCCAGCC-----GAGTTCTGGGACCTACT 1784
Query 2950 ----------ACTCCC------------------CTCCTCCTGTCAGCAAGGTCAAAGGACCTAGAG------- 2988
|||||| || ||||||.| ||| .||||||.
Sbjct 1785 GGGAGGGAAAACTCCCTATGCCAATGATAAAAGACT-------TCAGCAGG---AAA--TCCTAGATGTCCAGT 1846
Query 2989 -------------------------------------------------------------------------- 2988
Sbjct 1847 CTCGTCTCTTTGAATGTTCCAATAAGACCGGCCAATTCGTTGTCACTGAGATCACAGACTTCACCCAGGATGAC 1920
Query 2989 -------------------------------------------------------------------------- 2988
Sbjct 1921 CTGAACCCTACTGACGTGATGCTCCTAGATACCTGGGACCAGGTGTTCTTGTGGATTGGGGCTGAGGCCAATGC 1994
Query 2989 -------------------------------------------------------------------------- 2988
Sbjct 1995 CACGGAGAAGGAGAGTGCCCTTGCCACAGCACAGCAGTACCTGCACACTCACCCCAGCGGCCGAGATCCCGACA 2068
Query 2989 -------------------------------------------------------------------------- 2988
Sbjct 2069 CACCAATCCTGATCATTAAGCAGGGGTTTGAGCCTCCCATCTTCACAGGCTGGTTCCTAGCCTGGGACCCTAAC 2142
Query 2989 -------------------------------------------------------------------------- 2988
Sbjct 2143 ATTTGGAGTGCAGGAAAAACATATGAACAATTAAAAGAAGAGCTGGGAGATGCTGCTGCTATCATGCGAATCAC 2216
Query 2989 -------------------------------------------------------------------------- 2988
Sbjct 2217 TGCTGACATGAAGAATGCAACCCTCTCCCTGAATTCTAATGACAGTGAGCCAAAATATTACCCTATAGCAGTTC 2290
Query 2989 -------------------------------------------------------------------------- 2988
Sbjct 2291 TGTTGAAAAACCAGAATCAGGAGCTGCCTGAGGATGTAAACCCTGCCAAAAAGGAGAATTACCTCTCTGAACAG 2364
Query 2989 -------------------------------------------------------------------------- 2988
Sbjct 2365 GACTTTGTGTCTGTGTTTGGCATCACAAGAGGGCAATTTGCAGCTCTGCCTGGCTGGAAACAGCTCCAAATGAA 2438
Query 2989 ------------------- 2988
Sbjct 2439 GAAAGAAAAGGGGCTTTTC 2457
